Contig 011240:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF037J06+                                                              TGCTCGCA
                      ____________________________________________________________
consensus                                                                 TGCTCGCA
 
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rJMSF037J06+          GTGGGCTATTCTATGGGAATGCTTTCACTAACATGTGGAGTGAGTCTCAGTCATCTTGTT
rJMSF003G24+                                    ACTAACATGTGGAGTGAGTCTCAGTCATCTTGTT
                      ____________________________________________________________
consensus             GTGGGCTATTCTATGGGAATGCTTTCACTAACATGTGGAGTGAGTCTCAGTCATCTTGTT
 
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rJMSF037J06+          TGTCATTACTTCCCGTACGTGTTAGAGGGTCTGCATCTGTAACCGTCTACCGGACTAAAA
rJMSF003G24+          TGTCATTACTTCCCGTACGTGTTAGAGGGTCTGCATCTGTAACCGTCTACCGGACTAAAA
                      ____________________________________________________________
consensus             TGTCATTACTTCCCGTACGTGTTAGAGGGTCTGCATCTGTAACCGTCTACCGGACTAAAA
 
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rJMSF037J06+          ACCCCGATGCAAGTATAAGAACTTCTTTTCTATCTCGAGGAATTGTCAAGTTGTTGCCAG
rJMSF003G24+          ACCCCGATGCAAGTATAAGAACTTCTTTTCTATCTCGAGGAATTGTCAAGTTGTTGCCAG
                      ____________________________________________________________
consensus             ACCCCGATGCAAGTATAAGAACTTCTTTTCTATCTCGAGGAATTGTCAAGTTGTTGCCAG
 
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rJMSF037J06+          AAAAGTGTTATATGGGAAACGTGTATAGAAAACAGAGTTCTGTGTTTGATTCTCTGAGCC
rJMSF003G24+          AAAAGTGTTATATGGGAAACGTGTATAGAAAACAGAGTTCTGTGTTTGATTCTCTGAGCC
                      ____________________________________________________________
consensus             AAAAGTGTTATATGGGAAACGTGTATAGAAAACAGAGTTCTGTGTTTGATTCTCTGAGCC
 
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rJMSF037J06+          AGAGGGTGACTTCACTGGAAAATGTTTTGAAGAGCTTTCTGGGTGGCAGAACCAACAGAA
rJMSF003G24+          AGAGGGTGACTTCACTGGAAAATGTTTTGAAGAGCTTTCTGGGTGGCAGAACCAACAGAA
                      ____________________________________________________________
consensus             AGAGGGTGACTTCACTGGAAAATGTTTTGAAGAGCTTTCTGGGTGGCAGAACCAACAGAA
 
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rJMSF037J06+          ATACCGGATTGGGTCTAAAAATAAGAATCAAACCGTCATATATCTTCCGTTTCCAGATTG
rJMSF003G24+          ATACCGGATTGGGTCTAAAAATAAGAATCAAACCGTCATATATCTTCCGTTTCCAGATTG
                      ____________________________________________________________
consensus             ATACCGGATTGGGTCTAAAAATAAGAATCAAACCGTCATATATCTTCCGTTTCCAGATTG
 
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rJMSF037J06+          AATTAGAACGAAATATCCGTAGCAATGATACCTACTGGAGTACATTGGGCGAGTGGAGAA
rJMSF003G24+          AATTAGAACGAAATATCCGTAGCAATGATACCTACTGGAGTACATTGGGCGAGTGGAGAA
                      ____________________________________________________________
consensus             AATTAGAACGAAATATCCGTAGCAATGATACCTACTGGAGTACATTGGGCGAGTGGAGAA
 
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rJMSF037J06+          CAAGGCCAGCTGCTGAACGTGTTTGGTTCGAGGTGGTGGCAGGAATTGGGTCCGGGTTTA
rJMSF003G24+          CAAGGCCAGCTGCTGAACGTGTTTGGTTCGAGGTGGTGGCAGGAATTGGGTCCGGGTTTA
                      ____________________________________________________________
consensus             CAAGGCCAGCTGCTGAACGTGTTTGGTTCGAGGTGGTGGCAGGAATTGGGTCCGGGTTTA
 
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rJMSF037J06+          TGAAGCCATTCACGATAAGGAAAGTCCGACCATTTATTGAAGTAGATTCACTATCGTGGA
rJMSF003G24+          TGAAGCCATTCACGATAAGGAAAGTCCGACCATTTATTGAAGTAGATTCACTATCGTGGA
                      ____________________________________________________________
consensus             TGAAGCCATTCACGATAAGGAAAGTCCGACCATTTATTGAAGTAGATTCACTATCGTGGA
 
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rJMSF037J06+          GCAGTTTAATGTCAAACATTTCCTTCACAAAGTTTCCGTCTTTCCTCGTCCCTCCAGAGC
rJMSF003G24+          GCAGTTTAATGTCAAACATTTCCTTCACAAAGTTTCCGTCTTTCCTCGTCCCTCCAGAGC
                      ____________________________________________________________
consensus             GCAGTTTAATGTCAAACATTTCCTTCACAAAGTTTCCGTCTTTCCTCGTCCCTCCAGAGC
 
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rJMSF037J06+          CTCTAACACTGGATGTCAAATGGTGAAGAGGTTAGTCTTTCTTCTTATGATTTCCTCCTC
rJMSF003G24+          CTCTAACACTGGATGTCAAATGGTGAAGAGGTTAGTCTTTCTTCTTATGATTTCCTCCTC
                      ____________________________________________________________
consensus             CTCTAACACTGGATGTCAAATGGTGAAGAGGTTAGTCTTTCTTCTTATGATTTCCTCCTC
 
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rJMSF037J06+          CATAGTTTTACGGCTTTCTTCTCCTTTCCCTGTGTAATGATCTATTCACTTGTACAAATG
rJMSF003G24+          CATAGTTTTACGGCTTTCTTCTCCTTTCCCTGTGTAATGATCTATTCACTTGTACAAATG
                      ____________________________________________________________
consensus             CATAGTTTTACGGCTTTCTTCTCCTTTCCCTGTGTAATGATCTATTCACTTGTACAAATG
 
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rJMSF037J06+          TATTGTCTTACACTCTGTAAATTAAGAAATAGAAAGATGTAC                  
rJMSF003G24+          TATTGTCTTACACTCTGTAAATTAAGAAATAGAAAGATGTACCTGTATCTTTTCCTGTGA
                      ____________________________________________________________
consensus             TATTGTCTTACACTCTGTAAATTAAGAAATAGAAAGATGTACCTGTATCTTTTCCTGTGA