Contig 011234:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF039F03Sequence525009331 (4)ref|XP_009804551.1|3e-22PREDICTED: endochitinase A-like isoform X1 [Nicotiana sylvestris]681011234 (5)ref|XP_010654169.1|1e-19PREDICTED: mucin-12-like isoform X2 [Vitis vinifera]
JMSF002J22Sequence286017728ref|XP_004246841.1|6e-12PREDICTED: endochitinase A-like [Solanum lycopersicum]792011234 (5)emb|CAN77490.1|3e-20hypothetical protein VITISV_010725 [Vitis vinifera]
JMSF024A09Sequence664009331 (4)ref|XP_009804551.1|2e-24PREDICTED: endochitinase A-like isoform X1 [Nicotiana sylvestris]727011234 (5)emb|CAN77490.1|2e-20hypothetical protein VITISV_010725 [Vitis vinifera]
JMSF027H15Sequence676009331 (4)ref|XP_009804551.1|1e-24PREDICTED: endochitinase A-like isoform X1 [Nicotiana sylvestris]791011234 (5)ref|XP_004246841.1|1e-22PREDICTED: endochitinase A-like [Solanum lycopersicum]
JMSF035F02Sequence683009331 (4)ref|XP_009804551.1|1e-24PREDICTED: endochitinase A-like isoform X1 [Nicotiana sylvestris]727011234 (5)emb|CAN77490.1|2e-19hypothetical protein VITISV_010725 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027H15+ CTGATGGAAACCAAGGCATAG
rJMSF002J22+ AACCCAGGCATAG
                      ____________________________________________________________
consensus CTGATGGAAACCCAGGCATAG
 
. : . : . : . : . : . :
rJMSF024A09+ AATCCCGAACATTAGCATTCATAGCCATTGGAGCGG
rJMSF027H15+ ATCATGTTCTCCATCTAAAGGCCCAATCCCGAACATTAGCATTCATAGCCATTGGAGCGG
rJMSF035F02+ CATAGCCANTGGAGCGG
rJMSF002J22+ ATCATGTTCTCCATNTAAAGG-CCAATCCCGAACATTAGCATTCATAGCCATTGGAGCGG
                      ____________________________________________________________
consensus ATCATGTTCTCCATCTAAAGGCCCAATCCCGAACATTAGCATTCATAGCCATTGGAGCGG
 
. : . : . : . : . : . :
rJMSF024A09+ TTCGCTTTCCAGGAGCCGAGGGTACAATAATGATGAAGATGATGTGAACCCTGTACTGAT
rJMSF027H15+ TTCGCTTTCCAGGAGCCGAGGGTACAATAATGATGAAGATGATGTGAACCCTGTACTGAT
rJMFF039F03+ GGGTACAATAATGATGAAGATGATGTGANCCCTGTACTGAT
rJMSF035F02+ TTCGCTTTCCAGGAGCCGAGGGTACAATAATGATGAAGATGATGTGAACCCTGTACTGAT
rJMSF002J22+ TTCGCTTTCCAGGAGCCGAGGGTACAATAATGATGAAGATGATGTGAACCCTGTACTGAT
                      ____________________________________________________________
consensus TTCGCTTTCCAGGAGCCGAGGGTACAATAATGATGAAGATGATGTGAACCCTGTACTGAT
 
. : . : . : . : . : . :
rJMSF024A09+ GGGGACAAAGATGGTTGAAAGAGTAGTAAACATGAGAAAACTTGCTCCCCCCAAGCCCGA
rJMSF027H15+ GGGGACAAAGATGGTTGAAAGAGTAGTAAACATGAGAAAACTTGCTCCCCCCAAGCCCGA
rJMFF039F03+ GGGGACAAAGATGGTTGAAAGAGTAGTAAACATGAGAAAACTTGCTCCCCCCAAGCCCGA
rJMSF035F02+ GGGGACAAAGATGGTTGAAAGAGTAGTAAACATGAGAAAACTTGCTCCCCCCAAGCCCGA
rJMSF002J22+ GGGGACAAAGATGGTTGAAAGAGTAGTAAACATGAGAAAACTTGCTCCCCCCAAGCCCGA
                      ____________________________________________________________
consensus GGGGACAAAGATGGTTGAAAGAGTAGTAAACATGAGAAAACTTGCTCCCCCCAAGCCCGA
 
. : . : . : . : . : . :
rJMSF024A09+ TGACCATCAATCTAGCAGCAAAGACTCCTCCAAGAAGTCTTCCATATCTCAAAAGAGCTC
rJMSF027H15+ TGACCATCAATCTAGCAGCAAAGACTCCTCCAAGAAGTCTTCCATATCTCAAAAGAGCTC
rJMFF039F03+ TGACCATCAATCTAGCAGCAAAGACTCCTCCAAGAAGTCTTCCATATCTCAAAAGAGCTC
rJMSF035F02+ TGACCATCAATCTAGCAGCAAAGACTCCTCCAAGAAGTCTTCCATATCTCAAAAGAGCTC
rJMSF002J22+ TGACCATCAATCTAGCAGCAAAGACTCCTCCAAGAAGTCTTCCATATCTCAAAAGAGCTC
                      ____________________________________________________________
consensus TGACCATCAATCTAGCAGCAAAGACTCCTCCAAGAAGTCTTCCATATCTCAAAAGAGCTC
 
. : . : . : . : . : . :
rJMSF024A09+ AAGCTTCGGAACATCCTTCTCTAAGAAGTCTCTGGACATGGCTATAAGACATATGGAAAT
rJMSF027H15+ AAGCTTCGGAACATCCTTCTCTAAGAAGTCTCTGGACATGGCTATAAGACATATGGAAAT
rJMFF039F03+ AAGCTTCGGAACATCCTTCTCTAAGAAGTCTCTGGACATGGCTATAAGACATATGGAAAT
rJMSF035F02+ AAGCTTCGGAACATCCTTCTCTAAGAAGTCTCTGGACATGGCTATAAGACATATGGAAAT
rJMSF002J22+ AAGCTTCGGAACATCCTTCTCTAAGAAGTCTCTGGACATGGCTATAAGACATATGGAAAT
                      ____________________________________________________________
consensus AAGCTTCGGAACATCCTTCTCTAAGAAGTCTCTGGACATGGCTATAAGACATATGGAAAT
 
. : . : . : . : . : . :
rJMSF024A09+ ACGACGAAGCAGTGGTGGTAATGCAAACCGAGCAATGAAAAAGGGTTATCCAGCATCCTC
rJMSF027H15+ ACGACGAAGCAGTGGTGGTAATGCAAACCGAGCAATGAAAAAGGGTTATCCAGCATCCTC
rJMFF039F03+ ACGACGAAGCAGTGGTGGTAATGCAAACCGAGCAATGAAAAAGGGTTATCCAGCATCCTC
rJMSF035F02+ ACGACGAAGCAGTGGTGGTAATGCAAACCGAGCAATGAAAAAGGGTTATCCAGCATCCTC
rJMSF002J22+ ACGACGAAGCAGTGGTGGTAATGCAAACCGAGCAATGAAAAAGGGTTATCCAGCATCCTC
                      ____________________________________________________________
consensus ACGACGAAGCAGTGGTGGTAATGCAAACCGAGCAATGAAAAAGGGTTATCCAGCATCCTC
 
. : . : . : . : . : . :
rJMSF024A09+ GGCCAATGGTGTTCAGGCAAACTGCAGCAGTAAGAGCAAAACAAGTAGCAATGCCAGTCC
rJMSF027H15+ GGCCAATGGTGTTCAGGCAAACTGCAGCAGTAAGAGCAAAACAAGTAGCAATGCCAGTCC
rJMFF039F03+ GGCCAATGGTGTTCAGGCAAACTGCAGCAGTAAGAGCAAAACAAGTAGCAATGCCAGTCC
rJMSF035F02+ GGCCAATGGTGTTCAGGCAAACTGCAGCAGTAAGAGCAAAACAAGTAGCAATGCCAGTCC
rJMSF002J22+ GGCCAATGGTGTTCAGGCAAACTGCAGCAGTAAGAGCAAAACAAGTAGCAATGCCAGTCC
                      ____________________________________________________________
consensus GGCCAATGGTGTTCAGGCAAACTGCAGCAGTAAGAGCAAAACAAGTAGCAATGCCAGTCC
 
. : . : . : . : . : . :
rJMSF024A09+ CGAGCCCAGCATCAACAATGGCTGCCATCATGGCTACGAAAGTGAAGTGGAAGACAGTAA
rJMSF027H15+ CGAGCCCAGCATCAACAATGGCTGCCATCATGGCTACGAAAGTGAAGTGGAAGACAGTAA
rJMFF039F03+ CGAGCCCAGCATCAACAATGGCTGCCATCATGGCTACGAAAGTGAAGTGGAAGACAGTAA
rJMSF035F02+ CGAGCCCAGCATCAACAATGGCTGCCATCATGGCTACGAAAGTGAAGTGGAAGACAGTAA
rJMSF002J22+ CGAGCCCAGCATCAACAATGGCTGCCATCATGGCTACGAAAGTGAAGTGGAAGACAGTAA
                      ____________________________________________________________
consensus CGAGCCCAGCATCAACAATGGCTGCCATCATGGCTACGAAAGTGAAGTGGAAGACAGTAA
 
. : . : . : . : . : . :
rJMSF024A09+ TTGTGGAAGCGAAAGAGGACAACCCTCTGATCATCTGCAGCCATCAGAAAAGTAGCTTAT
rJMSF027H15+ TTGTGGAAGCGAAAGAGGACAACCCTCTGATCATCTGCAGCCATCAGAAAAGTAGCTTAT
rJMFF039F03+ TTGTGGAAGCGAAAGAGGACAACCCTCTGATCATCTGCAGCCATCAGAAAAGTAGCTTAT
rJMSF035F02+ TTGTGGAAGCGAAAGAGGACAACCCTCTGATCATCTGCAGCCATCAGAAAAGTAGCTTAT
rJMSF002J22+ TTGTGGAAGCGAAAGAGGACAACCCTCTGATCATCTGCAGCCATCAGAAAAGTAGCTTAT
                      ____________________________________________________________
consensus TTGTGGAAGCGAAAGAGGACAACCCTCTGATCATCTGCAGCCATCAGAAAAGTAGCTTAT
 
. : . : . : . : . : . :
rJMSF024A09+ TGAAATTGCAGATCAGATACACATTTCTGCAGTAAGTTATCGCTTGCCAGCATATTGCAC
rJMSF027H15+ TGAAATTGCAGATCAGATACACATTTCTGCAGTAAGTTATCGCTTGCCAGCATATTGCAC
rJMFF039F03+ TGAAATTGCAGATCAGATACACATTTCTGCAGTAAGTTATCGCTTGCCAGCATATTGCAC
rJMSF035F02+ TGAAATTGCAGATCAGATACACATTTCTGCAGTAAGTTATCGCTTGCCAGCATATTGCAC
rJMSF002J22+ TGAAATTGCAGATCAGATACACATTTCTGCAGTAAGTTATCGCTTGCCAGCATATTGCAC
                      ____________________________________________________________
consensus TGAAATTGCAGATCAGATACACATTTCTGCAGTAAGTTATCGCTTGCCAGCATATTGCAC
 
. : . : . : . : . : . :
rJMSF024A09+ TTGGATTTCGTTTTTTACAAAAATCCGGTTGTTACATTCTTTGTACTCTCTGCGTGTGTT
rJMSF027H15+ TTGGATTTCGTTTTTTACAAAAATCCGGTTGTTACATTCTTTGTACTCTCTGCGTGTGTT
rJMFF039F03+ TTGGATTTCGTTTTTTACAAAAATCCGGTTGTTACATTCTTTGTACTCTCTGCGTGTGTT
rJMSF035F02+ TTGGATTTCGTTTTTTACAAAAATCCGGTTGTTACATTCTTTGTACTCTCTGCGTGTGTT
rJMSF002J22+ TTGGATTTCGTTTTTTACAAAAATCCGGTTGTTACATTCTTTGTACTCTCTGCGTGTGTT
                      ____________________________________________________________
consensus TTGGATTTCGTTTTTTACAAAAATCCGGTTGTTACATTCTTTGTACTCTCTGCGTGTGTT
 
. : . : . : . : . : . :
rJMSF024A09+ GTGCTACTGCTTCTGTAGCAAGAACTAGATACAGCTTGTAATTTATATGATTTTTGTGAT
rJMSF027H15+ GTGCTACTGCTTCTGTAGCAAGAACTAGATACAGCTTGTAATTTATATGATTTTTGTGAT
rJMFF039F03+ GTGCTACTGCTTCTGTAGCAAGAACTAGATACAGCTTGTAATTTATATGATTTTTGTGAT
rJMSF035F02+ GTGCTACTGCTTCTGTAGCAAGAACTAGATACAGCTTGTAATTTATATGATTTTTGTGAT
rJMSF002J22+ GTGCTACTGCTTCTGTAGCAAGAACTAGATACAGCTTGTAATTTATATGATTTTTGTGAT
                      ____________________________________________________________
consensus GTGCTACTGCTTCTGTAGCAAGAACTAGATACAGCTTGTAATTTATATGATTTTTGTGAT
 
. : . : . : . : . : . :
rJMSF024A09+ AGAGATTATAAAAACT
rJMSF027H15+ AGAGATTATAAAAACTTGAACATTAATTAGCACATTAATGTTGATAAATT
rJMFF039F03+ AGAGATTATAAAAACTTGAACATTAATTAGCACATTAATG
rJMSF035F02+ AGAGATTATAAAAACTTGAACATTAATTAGCACATTAATGTTGATAAATT
rJMSF002J22+ AGAGATTATAAAAACTTGAACATTAATTAGCACATTAATGTTGATAAATTTGATGTGTAT
                      ____________________________________________________________
consensus AGAGATTATAAAAACTTGAACATTAATTAGCACATTAATGTTGATAAATTTGATGTGTAT