Contig 011228:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051P15Sequence624003760 (2)ref|XP_008388180.1|1e-87PREDICTED: fructose-1,6-bisphosphatase, chloroplastic-like [Malus domestica]581011228 (2)ref|XP_002527886.1|5e-64fructose-1,6-bisphosphatase, putative [Ricinus communis] gb|EEF34517.1| fructose
JMSF033K12Sequence712003760 (2)ref|XP_008388180.1|7e-102PREDICTED: fructose-1,6-bisphosphatase, chloroplastic-like [Malus domestica]737011228 (2)ref|XP_002527886.1|1e-113fructose-1,6-bisphosphatase, putative [Ricinus communis] gb|EEF34517.1| fructose

Alignment

This contig is upended


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rJMSF033K12+                                                           CTGAGCTTGAC
                      ____________________________________________________________
consensus                                                              CTGAGCTTGAC
 
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rJMSF033K12+          CAAGGGAAACAGAAATGTGTAGTGAGTGTGTGCCAGCCAGGGGATAACCTCCTCGCAGCA
                      ____________________________________________________________
consensus             CAAGGGAAACAGAAATGTGTAGTGAGTGTGTGCCAGCCAGGGGATAACCTCCTCGCAGCA
 
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rJMSF033K12+          GGCTATTGCATGTACTCGAGCTCTGTGATCTTCGTTCTCACCTTGGGAAAAGGCGTTTTC
                      ____________________________________________________________
consensus             GGCTATTGCATGTACTCGAGCTCTGTGATCTTCGTTCTCACCTTGGGAAAAGGCGTTTTC
 
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rJMSF033K12+          GCCTTCACCTTGGACCCTATGTATGGCGAATTCGTTCTTACCCAAGAAATCATTCAGATC
                      ____________________________________________________________
consensus             GCCTTCACCTTGGACCCTATGTATGGCGAATTCGTTCTTACCCAAGAAATCATTCAGATC
 
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rJMSF033K12+          CCAAAGGCGGGAAAGATATACGCGTTTAATGAAGGGAACTACCAGCTATGGGATGATAAG
rJMFF051P15+                             ACGCGTTTAATGAAGGGAACTACCAGCTATGGGATGATAAG
                      ____________________________________________________________
consensus             CCAAAGGCGGGAAAGATATACGCGTTTAATGAAGGGAACTACCAGCTATGGGATGATAAG
 
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rJMSF033K12+          TTGAAGAAGTACATTGATGACCTTAAGGACCCTGGTCCTAGTGGCAAGCCTTATTCTGCT
rJMFF051P15+          TTGAAGAAGTACATTGATGACCTTAAGGACCCTGGTCCTAGTGGCAAGCCTTATTCTGCT
                      ____________________________________________________________
consensus             TTGAAGAAGTACATTGATGACCTTAAGGACCCTGGTCCTAGTGGCAAGCCTTATTCTGCT
 
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rJMSF033K12+          AGGTACATTGGCAGTTTGGTGGGAGACTTCCATAGGACTCTTTTGTATGGAGGCATTTAT
rJMFF051P15+          AGGTACATTGGCAGTTTGGTGGGAGACTTCCATAGGACTCTTTTGTATGGAGGCATTTAT
                      ____________________________________________________________
consensus             AGGTACATTGGCAGTTTGGTGGGAGACTTCCATAGGACTCTTTTGTATGGAGGCATTTAT
 
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rJMSF033K12+          GGGTACCCAAGAGACAAGAAGAGCAAGAACGGGAAGCTAAGGCTTCTGTACGAGTGTGCC
rJMFF051P15+          GGGTACCCAAGAGACAAGAAGAGCAAGAACGGGAAGCTAAGGCTTCTGTACGAGTGTGCC
                      ____________________________________________________________
consensus             GGGTACCCAAGAGACAAGAAGAGCAAGAACGGGAAGCTAAGGCTTCTGTACGAGTGTGCC
 
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rJMSF033K12+          CCGATGAGCTTCATCGTGGAGCAAGCCGGTGGGAAAGGATCAGATGGCCATAAAAGAATT
rJMFF051P15+          CCGATGAGCTTCATCGTGGAGCAAGCCGGTGGGAAAGGATCAGATGGCCATAAAAGAATT
                      ____________________________________________________________
consensus             CCGATGAGCTTCATCGTGGAGCAAGCCGGTGGGAAAGGATCAGATGGCCATAAAAGAATT
 
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rJMSF033K12+          CTTGATATCACACCAGTTGAGATACACCAGCGAGTTCCTCTATACATTGGAAGTGTGGAG
rJMFF051P15+          CTTGATATCACACCAGTTGAGATACACCAGCGAGTTCCTCTATACATTGGAAGTGTGGAG
                      ____________________________________________________________
consensus             CTTGATATCACACCAGTTGAGATACACCAGCGAGTTCCTCTATACATTGGAAGTGTGGAG
 
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rJMSF033K12+          GAAGTTGATAAGTTGGAGAAGTACCTAGCTTAATCCAAGAATGAAATGCAGAGATGAGTA
rJMFF051P15+          GAAGTTGATAAGTTGGGGAAGTACCTAGCTTAATCCAAGAATGAAATGCAGAGATGAGTA
                      ____________________________________________________________
consensus             GAAGTTGATAAGTTGGGGAAGTACCTAGCTTAATCCAAGAATGAAATGCAGAGATGAGTA
 
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rJMSF033K12+          CATTGAAGCCATGGTGTTGTTTTGGACCACTCTCAGATGTATATCAGAATCTACAACTTA
rJMFF051P15+          CATTGAAGCCATGGTGTTGTTTTGGACCACTCTCAGATGTATATCAGAATCTACAACTTA
                      ____________________________________________________________
consensus             CATTGAAGCCATGGTGTTGTTTTGGACCACTCTCAGATGTATATCAGAATCTACAACTTA
 
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rJMSF033K12+          AAATGCATTGTAAACACTTGAAAATAAAATATTATTCTTTTGATCTTTTCTGAGTC    
rJMFF051P15+          AAATGCATTGTAAACACTTGAAAATAAAATATTATTCTTTTGATCTTTTCTGAGTCAGGC
                      ____________________________________________________________
consensus             AAATGCATTGTAAACACTTGAAAATAAAATATTATTCTTTTGATCTTTTCTGAGTCAGGC
 
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rJMFF051P15+          AAAATGATTGTAGATGTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AAAATGATTGTAGATGTTCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG