Contig 011224:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006K21Sequence103012827 (3)772011224 (3)ref|XP_006363772.1|2e-98PREDICTED: metal tolerance protein C2-like [Solanum tuberosum]
JMFF008A08Sequence549012827 (3)ref|XP_009618767.1|2e-53PREDICTED: metal tolerance protein C2 isoform X1 [Nicotiana tomentosiformis]716011224 (3)ref|XP_006363772.1|5e-88PREDICTED: metal tolerance protein C2-like [Solanum tuberosum]
JMFF051E15Sequence615012827 (3)ref|XP_009618767.1|2e-59PREDICTED: metal tolerance protein C2 isoform X1 [Nicotiana tomentosiformis]540011224 (3)ref|XP_006363772.1|5e-33PREDICTED: metal tolerance protein C2-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF008A08+                                                     CTTCAGAAACTATGCTC
rJMFF006K21+           TGCTGTTACCAACTTGCTTGTGAATCTCATTGGTGTTTGGTTCTTCAGAAACTATGCTC
                      ____________________________________________________________
consensus              TGCTGTTACCAACTTGCTTGTGAATCTCATTGGTGTTTGGTTCTTCAGAAACTATGCTC
 
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rJMFF008A08+          GTATTAATCTNGTTTATAGGAAGGCTGAAGATATGAATTATCACTCAGTCTGTCTGCACG
rJMFF006K21+          GTATTAATCTTGTTTATAGGAAGGCTGAAGATATGAATTATCACTCAGTCTGTCTGCACG
                      ____________________________________________________________
consensus             GTATTAATCTTGTTTATAGGAAGGCTGAAGATATGAATTATCACTCAGTCTGTCTGCACG
 
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rJMFF008A08+          TTATAGCTGATTCTGTTCGCAGTGCAGGTTTGATCCTGGCTTCCTGGTTGTTGACATTAG
rJMFF006K21+          TTATAGCTGATTCTGTTCGCAGTGCAGGTTTGATCCTGGCTTCCTGGTTGTTGACATTAG
                      ____________________________________________________________
consensus             TTATAGCTGATTCTGTTCGCAGTGCAGGTTTGATCCTGGCTTCCTGGTTGTTGACATTAG
 
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rJMFF008A08+          GGGTGAAGAACGCTGAAGTCCTTTGCATGGGATTAGTTTCAGGCACAGTGTTTATGCTTG
rJMFF006K21+          GGGTGAAGAACGCTGAAGTCCTTTGCATGGGATTAGTTTCAGGCACAGTGTTTATGCTTG
rJMFF051E15+                                                                     G
                      ____________________________________________________________
consensus             GGGTGAAGAACGCTGAAGTCCTTTGCATGGGATTAGTTTCAGGCACAGTGTTTATGCTTG
 
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rJMFF008A08+          TCATGCCGCTATTTAAGGCTACTGCTGGAGTTCTTCTCCAAACGGCACCACCCAACATCC
rJMFF006K21+          TCATGCCGCTATTTAAGGCTACTGCTGGAGTTCTTCTCCAAACGGCACCACCCAACATCC
rJMFF051E15+          TCATGCCGCTATTNAAGGCTACTGCT-GAGTTTTTCTCCAAACGGCACCACCCAACATCC
                      ____________________________________________________________
consensus             TCATGCCGCTATTTAAGGCTACTGCTGGAGTTCTTCTCCAAACGGCACCACCCAACATCC
 
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rJMFF008A08+          CTTCTTCTACCTTGAACAAATGCTGGCGACAGGTTGCCTCACATGATAGCGTTACAGAAT
rJMFF006K21+          CTTCTTCTACCTTGAACAAATGCTGGCGACAGGTTGCCTCACATGATAGCGTTACAGAAT
rJMFF051E15+          CTTCTTTTACCTTGAACAAATGCTGGCGACAGGTTGCCTCACATGATAGCGTTACAGAAT
                      ____________________________________________________________
consensus             CTTCTTCTACCTTGAACAAATGCTGGCGACAGGTTGCCTCACATGATAGCGTTACAGAAT
 
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rJMFF008A08+          TATTTCAAGTTCGTCTTTGGGAAATGGTGCCAGGCCACGCCATTGGATCGATTTCACTGC
rJMFF006K21+          TATTTCAAGTTCGTCTTTGGGAAATGGTGCCAGGCCACGCCATTGGATCGATTTCACTGC
rJMFF051E15+          TATTTCAAGTTCGTCTTTGGGAAATGGTGCCAGGCCACGCCATTGGATCGATTTCACTGC
                      ____________________________________________________________
consensus             TATTTCAAGTTCGTCTTTGGGAAATGGTGCCAGGCCACGCCATTGGATCGATTTCACTGC
 
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rJMFF008A08+          AGGTGAAGAAGGGAGTGGATGATCGTCCAGTGTTGCAATATGTGCGTGATTTATACCACG
rJMFF006K21+          AGGTGAAGAAGGGAGTGGATGATCGTCCAGTGTTGCAATATGTGCGTGATTTATACCACG
rJMFF051E15+          AGGTGAAGAAGGGAGTGGATGATCGTCCAGTGTTGCAATATGTGCGTGATTTATACCACG
                      ____________________________________________________________
consensus             AGGTGAAGAAGGGAGTGGATGATCGTCCAGTGTTGCAATATGTGCGTGATTTATACCACG
 
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rJMFF008A08+          ATCTAGGGGTACAAGATTTAACAGTACAAATTGAGGCTTGATTTTCTTCTCCGCGGATTC
rJMFF006K21+          ATCTAGGGGTACAAGATTTAACAGTACAAATTGAGGCTTGATTTTCTTCTCCGCGGATTC
rJMFF051E15+          ATCTAGGGGTACAAGATTTAACAGTACAAATTGAGGCTTGATTTTCTTCTCCGCGGATTC
                      ____________________________________________________________
consensus             ATCTAGGGGTACAAGATTTAACAGTACAAATTGAGGCTTGATTTTCTTCTCCGCGGATTC
 
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rJMFF008A08+          TTTGTTAAATCCCGGAAGCTTAATGACAATGGAAATACATATACTATCGTTGGAGCTACA
rJMFF006K21+          TTTGTTAAATCCCGGAAGCTTAATGACAATGGAAATACATATACTATCGTTGGAGCTACA
rJMFF051E15+          TTTGTTAAATCCCGGAAGCTTAATGACAATGGAAATACATATACTATCGTTGGAGCTACA
                      ____________________________________________________________
consensus             TTTGTTAAATCCCGGAAGCTTAATGACAATGGAAATACATATACTATCGTTGGAGCTACA
 
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rJMFF008A08+          TTGAAATTCTCTCTCTAGTAAATTAGTACATATATCGTCGCAGCTTCTGAAGTTGTGATG
rJMFF006K21+          TTGAAATTCTCTCTCTAGTAAATTAGTACATATATCGTCGCAGCTTCTGAAGTTGTGATG
rJMFF051E15+          TTGAAATTCTCTCTCTAGTAAATTAGTACATATATCGTCGCAGCTTCTGAAGTTGTGATG
                      ____________________________________________________________
consensus             TTGAAATTCTCTCTCTAGTAAATTAGTACATATATCGTCGCAGCTTCTGAAGTTGTGATG
 
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rJMFF008A08+          AATATCCTTGATGATCAATCTCGTTAAGAGTTTCTTATTTTCCTAGCTGAACTTTCTTGT
rJMFF006K21+          AATATCCTTGATGATCAATCTCGTTAAGAGTTTCTTATTTTCCTAGCTGAACTTTCTTGT
rJMFF051E15+          AATATCCTTGATGATCAATCTCGTTAAGAGTTTCTTATTTTCCTAGCTGAACTTTCTTGT
                      ____________________________________________________________
consensus             AATATCCTTGATGATCAATCTCGTTAAGAGTTTCTTATTTTCCTAGCTGAACTTTCTTGT
 
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rJMFF008A08+          TATATATATAAAGGAATAACCACCAATTTTCTCATAGTT                     
rJMFF006K21+          TATATATATAAAGGAATAACCACCAATTTTCTCATAGTTTATTT                
rJMFF051E15+          TATATATATAAAGGAATAACCACCAATTTTCTCATAGTTTATTTTAGCAGCAAACATTCT
                      ____________________________________________________________
consensus             TATATATATAAAGGAATAACCACCAATTTTCTCATAGTTTATTTTAGCAGCAAACATTCT