Contig 011221:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041O01Sequence655010292 (6)emb|CDP01270.1|6e-67unnamed protein product [Coffea canephora]555011221 (2)ref|XP_009800928.1|1e-30PREDICTED: cirhin-like [Nicotiana sylvestris]
JMFF050O03Sequence609010292 (6)emb|CDP01270.1|3e-64unnamed protein product [Coffea canephora]574011221 (2)ref|XP_009800928.1|3e-34PREDICTED: cirhin-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF041O01+ CAAGGGCAATGTGTGCGATTGAC-TTGGGGTGC
rJMFF050O03+ CCAAGGGCAATGTGTGCGATTGACTTTGGGGTGC
                      ____________________________________________________________
consensus CCAAGGGCAATGTGTGCGATTGACTTTGGGGTGC
 
. : . : . : . : . : . :
rJMFF041O01+ CGGTTGAAGTAGACGATAATGACCTGGCAAACAGTCAGGAGTTGCTGTTACGGAAGATAC
rJMFF050O03+ CGGTTGAAGTAGACGATAATGACCTGGCAAACAGTCAGGAGTTGCTGTTACGGAAGATAC
                      ____________________________________________________________
consensus CGGTTGAAGTAGACGATAATGACCTGGCAAACAGTCAGGAGTTGCTGTTACGGAAGATAC
 
. : . : . : . : . : . :
rJMFF041O01+ AGGGCACCCCTCTGAACGGAAAATTGAAGCGGAAGTTGAAAGGAACGGAGTTAGAGATGA
rJMFF050O03+ AGGGCACCCCTCTGAACGGAAAATTGAAGCGGAAGTTGAAAGGAACGGAGTTAGAGATGA
                      ____________________________________________________________
consensus AGGGCACCCCTCTGAACGGAAAATTGAAGCGGAAGTTGAAAGGAACGGAGTTAGAGATGA
 
. : . : . : . : . : . :
rJMFF041O01+ GTCATCAACATTACGGTAGGAATAATTTTATATTTGGTGAATTCCGAGATCCTGTTTTAT
rJMFF050O03+ GTCATCAACATTACGGTAGGAATAATTTTATATTTGGTGAATTCCGAGATCCTGTTTTAT
                      ____________________________________________________________
consensus GTCATCAACATTACGGTAGGAATAATTTTATATTTGGTGAATTCCGAGATCCTGTTTTAT
 
. : . : . : . : . : . :
rJMFF041O01+ TTCTCGGACATCTATCAAAAAGTTCAGTCTTGGTCATAGACAAACGATGGATTGACGTGG
rJMFF050O03+ TTCTCGGACATCTATCAAAAAGTTCAGTCTTGGTCATAGACAAACGATGGATTGACGTGG
                      ____________________________________________________________
consensus TTCTCGGACATCTATCAAAAAGTTCAGTCTTGGTCATAGACAAACGATGGATTGACGTGG
 
. : . : . : . : . : . :
rJMFF041O01+ TTAAAACATTAGACGCACCGCCTGTTCACAGACATATTTTTGGCACGTAGTTACATCAAT
rJMFF050O03+ TTAAAACATTAGACGCACCGCCTGTTCACAGACATATTTTTGGCACGTAGTTACATCAAT
                      ____________________________________________________________
consensus TTAAAACATTAGACGCACCGCCTGTTCACAGACATATTTTTGGCACGTAGTTACATCAAT
 
. : . : . : . : . : . :
rJMFF041O01+ ACAGGCGGTGGTTCTATTAACACATCACAGTAGTAGGGAAAAGCTTGCTCTAATGAGGAA
rJMFF050O03+ ACAGGCGGTGGTTCTATTAACACATCACAGTAGTAGGGAAAAGCTTGCTCTAATGAGGAA
                      ____________________________________________________________
consensus ACAGGCGGTGGTTCTATTAACACATCACAGTAGTAGGGAAAAGCTTGCTCTAATGAGGAA
 
. : . : . : . : . : . :
rJMFF041O01+ AATCAAAGTACCTTTACTCTCAGCTCTTATTCCTTGTTGTCTGTCGGGGGTGTTGGGTGA
rJMFF050O03+ AATCAAAGTACCTTTACTCTCAGCTCTTATTCCTTGTTGTCTGTCGGGGGTGTTGGGTGA
                      ____________________________________________________________
consensus AATCAAAGTACCTTTACTCTCAGCTCTTATTCCTTGTTGTCTGTCGGGGGTGTTGGGTGA
 
. : . : . : . : . : . :
rJMFF041O01+ AGGGGGCATTTTTCGTTTCTTTTACAAAGCCATGTTGTGTAATGTATTCCTTTGTTAACA
rJMFF050O03+ AGGGGGCATTTTTCGTTTCTTTTACAAAGCCATGTTGTGTAATGTATTCCTTTGTTAACA
                      ____________________________________________________________
consensus AGGGGGCATTTTTCGTTTCTTTTACAAAGCCATGTTGTGTAATGTATTCCTTTGTTAACA
 
. : . : . : . : . : . :
rJMFF041O01+ TCTGAAATCAAATTTTTGAGTTCAATATAA
rJMFF050O03+ TCTGAAATCAAATTTTTGAGTTCAATATAATTCTTTTGATTTGCAGGTTATCTGCTCTGC
                      ____________________________________________________________
consensus TCTGAAATCAAATTTTTGAGTTCAATATAATTCTTTTGATTTGCAGGTTATCTGCTCTGC