Contig 011219:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF050J14-                                                                   GCAT
                      ____________________________________________________________
consensus                                                                     GCAT
 
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JMFF050J14-           TGCTTTTCCGACAACTGGGTAGCCGCTTATGGTTTTTAGCTGCTTACAGAAATGGGGATT
                      ____________________________________________________________
consensus             TGCTTTTCCGACAACTGGGTAGCCGCTTATGGTTTTTAGCTGCTTACAGAAATGGGGATT
 
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JMFF050J14-           AAGAAGGAGAAGAAAACTTCATCTTCCTCAGCAACTTCACCTTGCGCCCACCTCAGAGAA
rJMFF050J14+                                                               CAGAGAA
                      ____________________________________________________________
consensus             AAGAAGGAGAAGAAAACTTCATCTTCCTCAGCAACTTCACCTTGCGCCCACCTCAGAGAA
 
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JMFF050J14-           GCTTACCACAATTGCTTCAACAGATGGTATTCTGAGAAGTTCTTGAAGGGTCAATGGGAT
rJMFF050J14+          GCTTACCACAATTGCTTCAACAGATGGTATTCTGAGAAGTTCTTGAAGGGTCAATGGGAT
                      ____________________________________________________________
consensus             GCTTACCACAATTGCTTCAACAGATGGTATTCTGAGAAGTTCTTGAAGGGTCAATGGGAT
 
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JMFF050J14-           AAAGAAGAATGCGTTTCGGAGTGGCAGAAATATCGAGATTGTCTTTCTCAACATTTGGAT
rJMFF050J14+          AAAGAAGAATGCGTTTCGGAGTGGCAGAAATATCGAGATTGTCTTTCTCAACATTTGGAT
                      ____________________________________________________________
consensus             AAAGAAGAATGCGTTTCGGAGTGGCAGAAATATCGAGATTGTCTTTCTCAACATTTGGAT
 
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JMFF050J14-           GATAAATATTTGAGTAGATTCTTGGAAGCGGAGGGCACTATCAATTTGGGCAATCAAACT
rJMFF050J14+          GATAAATATTTGAGTAGATTCTTGGAAGCGGAGGGCACTATCAATTTGGGCAATCAAACT
                      ____________________________________________________________
consensus             GATAAATATTTGAGTAGATTCTTGGAAGCGGAGGGCACTATCAATTTGGGCAATCAAACT
 
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JMFF050J14-           GATTTTAGTGGCCCTGCCGGAGCTCCTAGACAATAGCAACTCTATAACTTATGGAGATAC
rJMFF050J14+          GATTTTAGGGGCCCTGCCGGAGCTCCTAGACAATAGCAACTCTATAACTTATGGAGATAC
                      ____________________________________________________________
consensus             GATTTTAGTGGCCCTGCCGGAGCTCCTAGACAATAGCAACTCTATAACTTATGGAGATAC
 
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JMFF050J14-           TTGAGAAAGGATGCCAAGAAATTGCACTTTTTTGCTGCTCTTCTGGACAGTCTACATATT
rJMFF050J14+          TTGAGAAAGGATGCCAAGAAATTGCACTTTTTTGCTGCTCTTCTGGACAGTCTACATATT
                      ____________________________________________________________
consensus             TTGAGAAAGGATGCCAAGAAATTGCACTTTTTTGCTGCTCTTCTGGACAGTCTACATATT
 
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JMFF050J14-           AAGTTCAGCCTTTAATCTGGTTAAATGCTTTTGCTGTTGCTTTTCAACAGTTTGCCATAG
rJMFF050J14+          AAGTTCAGCCTTTAATCTGGTTAAATGCTTTTGCTGTTGCTTTTCAACAGTTTGCCATAG
                      ____________________________________________________________
consensus             AAGTTCAGCCTTTAATCTGGTTAAATGCTTTTGCTGTTGCTTTTCAACAGTTTGCCATAG
 
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JMFF050J14-           GCCCTAATAATGGGATTACAGGTACATGTATGAGATATTGAGATTCTATGCAAGAAGACT
rJMFF050J14+          GCCCTAATAATGGGATTACAGGTACATGTATGAGATATTGAGATTCTATGCAAGAAGACT
                      ____________________________________________________________
consensus             GCCCTAATAATGGGATTACAGGTACATGTATGAGATATTGAGATTCTATGCAAGAAGACT
 
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JMFF050J14-           GCAGCTTCTACAANAATCTTCCTTTTTTTTGTATGGGAAGTAGGAAAGTAGCTCGAATTG
rJMFF050J14+          GCAGCTTCTACAAAAATCTTCCTTTTTTTTGTATGGGAAGTAGGAAAGTAGCTCGAATTG
                      ____________________________________________________________
consensus             GCAGCTTCTACAAAAATCTTCCTTTTTTTTGTATGGGAAGTAGGAAAGTAGCTCGAATTG
 
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JMFF050J14-           CTATC                                                       
rJMFF050J14+          CTATCTTTTATTTGTATTAAATGTTGAAATGTTATCAATGAATTTGAAATGAATTTTACC
                      ____________________________________________________________
consensus             CTATCTTTTATTTGTATTAAATGTTGAAATGTTATCAATGAATTTGAAATGAATTTTACC