Contig 011217:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF050I05+                                     AGAATCATCCAGAAGCTTGGTTTTCCTGCCAAG
                      ____________________________________________________________
consensus                                        AGAATCATCCAGAAGCTTGGTTTTCCTGCCAAG
 
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rJMFF050I05+          TTTAAGGATTTTAAAATCCAGAATATNGTCGGTTCATGTGATGTTAAATTTCCCATAAGA
                      ____________________________________________________________
consensus             TTTAAGGATTTTAAAATCCAGAATATNGTCGGTTCATGTGATGTTAAATTTCCCATAAGA
 
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rJMFF050K05+                                             AAGTTATGAACCAGAGTTATTCCCC
rJMFF050I05+          CTTGAAGGCCTTGCATACTCCCACGGTGCTTTCTCAAGTTATGAACCAGAGTTATTCCCC
                      ____________________________________________________________
consensus             CTTGAAGGCCTTGCATACTCCCACGGTGCTTTCTCAAGTTATGAACCAGAGTTATTCCCC
 
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rJMFF050K05+          GGATTAATATACCGTATGAAACAACCAAAAATAGTGCTGCTGATTTTCGTCTCTGGGAAA
rJMFF050I05+          GGATTAATATACCGTATGAAACAACCAAAAATAGTGCTGCTGATTTTCGTCTCTGGGAAA
                      ____________________________________________________________
consensus             GGATTAATATACCGTATGAAACAACCAAAAATAGTGCTGCTGATTTTCGTCTCTGGGAAA
 
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rJMFF050K05+          ATTGTTCTGACAGGAGCTAAGGTTAGAGACGAGACATACGCTGCCTTCGAGAACATATAC
rJMFF050I05+          ATTGTTCTGACAGGAGCTAAGGTTAGAGACGAGACATACGCTGCCTTCGAGAACATATAC
                      ____________________________________________________________
consensus             ATTGTTCTGACAGGAGCTAAGGTTAGAGACGAGACATACGCTGCCTTCGAGAACATATAC
 
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rJMFF050K05+          CCCGTGCTCAATGAATTCCGGAAGAATCAGCAATGATTTCGGGAATCGATCTACTGTGGA
rJMFF050I05+          CCCGTGCTCAATGAATTCCGGAAGAATCAGCAATGATTTCGGGAATCGATCTACTGTGGA
                      ____________________________________________________________
consensus             CCCGTGCTCAATGAATTCCGGAAGAATCAGCAATGATTTCGGGAATCGATCTACTGTGGA
 
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rJMFF050K05+          CTGTGGAGATCTTACATGGGAAGACATGGCAGAATGGTGGAGTGTTGTGAACTGTAAATA
rJMFF050I05+          CTGTGGAGATCTTACATGGGAAGACATGGCAGAATGGTGGAGTGTTGTGAACTGTAAATA
                      ____________________________________________________________
consensus             CTGTGGAGATCTTACATGGGAAGACATGGCAGAATGGTGGAGTGTTGTGAACTGTAAATA
 
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rJMFF050K05+          TTAAGGAAATTAGATTTAGTTTAGTACTTGGTTGTGGTTCTCCTACCCTGTATCTTGTGA
rJMFF050I05+          TTAAGGAAATTAGATTTAGTTTAGTACTTGGTTGTGGTTCTCCT-CCCTGTATCTTGTGA
                      ____________________________________________________________
consensus             TTAAGGAAATTAGATTTAGTTTAGTACTTGGTTGTGGTTCTCCTACCCTGTATCTTGTGA
 
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rJMFF050K05+          AGTTTGTGCATCCATGTATAATATGTAGCAACATCTGATATTATACATTTTTTTGATAAT
rJMFF050I05+          AGTTTGTGCATCCATGTATAATATGTAGCAACATCTGATATTATACATTTTTTTGATAAT
                      ____________________________________________________________
consensus             AGTTTGTGCATCCATGTATAATATGTAGCAACATCTGATATTATACATTTTTTTGATAAT
 
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rJMFF050K05+          AAATTTGACCGACCAATAAATTACTGTGTAGTATTCAGTGGTAGTCTTATGCTAATATCA
rJMFF050I05+          AAATTTGACCGACCAATAAATTACTGTGTAGTATTCAGTTGTAGTCTTATGCTAATATCA
                      ____________________________________________________________
consensus             AAATTTGACCGACCAATAAATTACTGTGTAGTATTCAGTTGTAGTCTTATGCTAATATCA
 
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rJMFF050K05+          AGATTAGTCCTTGATGGGC                                         
rJMFF050I05+          AGATTAGTCCTTGATGGGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             AGATTAGTCCTTGATGGGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG