| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003K24 | Sequence | 338 | 003296 (4) | 631 | 011204 (3) | gb|KDO87040.1| | 8e-29 | hypothetical protein CISIN_1g004536mg [Citrus sinensis] | |||
| JMFF034I08 | Sequence | 516 | 003296 (4) | ref|XP_009788474.1| | 56.2 | PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris] | 716 | 011204 (3) | ref|XP_002515304.1| | 9e-41 | triacylglycerol lipase, putative [Ricinus communis] gb|EEF47288.1| triacylglycer |
| JMFF047P04 | Sequence | 570 | 003296 (4) | ref|XP_009788474.1| | 56.2 | PREDICTED: uncharacterized protein LOC104236281 [Nicotiana sylvestris] | 566 | 011204 (3) | gb|KDO87040.1| | 1e-13 | hypothetical protein CISIN_1g004536mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMFF034I08+ TCGTCCCCCCGTGACAGATG
____________________________________________________________
consensus TCGTCCCCCCGTGACAGATG
. : . : . : . : . : . :
rJMFF034I08+ ACGATGATGCAGAGAAACGAATCCTAGCTGCAAAGACCGCGTTCCTAAACTCCCCACATC
____________________________________________________________
consensus ACGATGATGCAGAGAAACGAATCCTAGCTGCAAAGACCGCGTTCCTAAACTCCCCACATC
. : . : . : . : . : . :
rJMFF034I08+ CTCTCGAGATCCTGAGCGACCGCTCAGCATATGGCTCGGGAGGAACCATACAAAGAGACC
rJMFF003K24+ CCTGAGCGACCGCTCAGCATATGGCTCGGGAGGAACCATACAAAGAGACC
____________________________________________________________
consensus CTCTCGAGATCCTGAGCGACCGCTCAGCATATGGCTCGGGAGGAACCATACAAAGAGACC
. : . : . : . : . : . :
rJMFF034I08+ ACGACATGAAATCATACTTGAAATCTGTCCGACACATCATTCATGTAGAGCTCAGCCGCA
rJMFF003K24+ ACGACATGAAATCATACTTGAAATCTGTCCGACACATCATTCATGTAGAGCTCAGCCGCA
rJMFF047P04+ CATCATTCATGTAGAGCTCAGCCGCA
____________________________________________________________
consensus ACGACATGAAATCATACTTGAAATCTGTCCGACACATCATTCATGTAGAGCTCAGCCGCA
. : . : . : . : . : . :
rJMFF034I08+ TCAGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
rJMFF003K24+ TCAGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
rJMFF047P04+ TCCGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
____________________________________________________________
consensus TCAGAAAATCAAAGAGGGAATCATGGTGGCCGCTGATCGTGATTCCTGGAGTTAAAGCTG
. : . : . : . : . : . :
rJMFF034I08+ CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
rJMFF003K24+ CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
rJMFF047P04+ CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
____________________________________________________________
consensus CTGACATTTTCGTTGGGAGATTGGTACGCCCCACTGGCCAAGGCCAATTCACTTTCGCTG
. : . : . : . : . : . :
rJMFF034I08+ GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
rJMFF003K24+ GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
rJMFF047P04+ GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
____________________________________________________________
consensus GAATGTTTCACAGCGGGAAAGAATCTCTGAAGCGATTTACAGTAGTTGCAGCCCAGCACA
. : . : . : . : . : . :
rJMFF034I08+ TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
rJMFF003K24+ TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
rJMFF047P04+ TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
____________________________________________________________
consensus TGCATTTGTTTCTCATGTTCTTGCTCCCTGCACCCCTGTTGATGCTCAGAGCATTCAATG
. : . : . : . : . : . :
rJMFF034I08+ TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
rJMFF003K24+ TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
rJMFF047P04+ TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
____________________________________________________________
consensus TTATTATCTTTCGTTGATTTTAGCACACAAGCATATATGCTGCTGTGATCGATCTAGAAA
. : . : . : . : . : . :
rJMFF034I08+ TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
rJMFF003K24+ TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
rJMFF047P04+ TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
____________________________________________________________
consensus TGGTTAGATGATTCTTTATTCATTTGATTGATTGCACAGGAATCTTATGTCCCCCTGGTG
. : . : . : . : . : . :
rJMFF034I08+ TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
rJMFF003K24+ TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
rJMFF047P04+ TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
____________________________________________________________
consensus TTTAGAATTGCCAGATAATTATAGATTTAGACAATAGATCAAAGATTAGATTAAAGGGGA
. : . : . : . : . : . :
rJMFF034I08+ AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
rJMFF003K24+ AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
rJMFF047P04+ AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
____________________________________________________________
consensus AAAAAAACAGAACATTGTAATTGCCAAGTGCCAAAATTGGGCAGGGAACTGCCTAAATCT
. : . : . : . : . : . :
rJMFF034I08+ CACATGCATGCATTGATGCATACCTATATAT
rJMFF003K24+ CACATGCATGCATTGATGCATACCTATATAT
rJMFF047P04+ CACATGCATGCATTGATGCATACCTATATATTGAAACCAAGTTGTCCTCGTGGGAAAAAT
____________________________________________________________
consensus CACATGCATGCATTGATGCATACCTATATATTGAAACCAAGTTGTCCTCGTGGGAAAAAT