| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014A19 | Sequence | 484 | 013214 (6) | ref|XP_009790033.1| | 3e-40 | PREDICTED: glutelin type-B 2-like [Nicotiana sylvestris] | 584 | 011202 (4) | gb|EYU18928.1| | 1e-81 | hypothetical protein MIMGU_mgv1a008981mg [Erythranthe guttata] |
| JMFF022N03 | Sequence | 524 | 013214 (6) | ref|XP_004251313.1| | 1e-87 | PREDICTED: glutelin type-A 3-like [Solanum lycopersicum] | 652 | 011202 (4) | gb|EYU18928.1| | 3e-67 | hypothetical protein MIMGU_mgv1a008981mg [Erythranthe guttata] |
| JMFF047M23 | Sequence | 510 | 013214 (6) | emb|CDP08990.1| | 5e-80 | unnamed protein product [Coffea canephora] | 459 | 011202 (4) | gb|EYU24103.1| | 3e-37 | hypothetical protein MIMGU_mgv1a022874mg [Erythranthe guttata] |
| JMSF003J01 | Sequence | 345 | 013214 (6) | ref|XP_009790033.1| | 3e-12 | PREDICTED: glutelin type-B 2-like [Nicotiana sylvestris] | 764 | 011202 (4) | ref|XP_011089417.1| | 9e-81 | PREDICTED: glutelin type-B 5 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF003J01+ GACG
____________________________________________________________
consensus GACG
. : . : . : . : . : . :
rJMSF003J01+ ATGGTGTGGTTAAGAAGCTTGTTGGGAGCCAATNTGGTAAAGGCATTGTTAAGCTCGATG
____________________________________________________________
consensus ATGGTGTGGTTAAGAAGCTTGTTGGGAGCCAATNTGGTAAAGGCATTGTTAAGCTCGATG
. : . : . : . : . : . :
rJMFF022N03+ CAGGAAGGGCATGGCACTGAACTGCG
rJMSF003J01+ CGGGTGCCAAGATGCCCGAGCCGAATCCGGACCACAGGAAGGGCATGGCACTGAACTGCG
____________________________________________________________
consensus CGGGTGCCAAGATGCCCGAGCCGAATCCGGACCACAGGAAGGGCATGGCACTGAACTGCG
. : . : . : . : . : . :
rJMFF022N03+ AGGAAGCTCCCTTGGATGTTGACATCAAGGATGGTGGGAAAGTCGTGGTCTTGAACACCA
rJMFF014A19+ CATCANGGATGGTGGGAAAGTTGTGGTCTTGANCNCCA
rJMSF003J01+ AGGAAGCTCCCTTGGATGTTGACATCAAGGATGGTGGGAAAGTCGTGGTCTTGAACACCA
____________________________________________________________
consensus AGGAAGCTCCCTTGGATGTTGACATCAAGGATGGTGGGAAAGTCGTGGTCTTGAACACCA
. : . : . : . : . : . :
rJMFF022N03+ AGAACCTGCCCTTGGTTGGCGAGGTTGGGCTCGGTGCCGACCTTGTGAGGTTGAATGGGA
rJMFF014A19+ AGAACCTGCCCTTGGTTGGTGAGGTTGGGCTCGGTGCCGACCTTGTGAGGTTGAACGGGA
rJMSF003J01+ AGAACCTGCCCTTGGTTGGCGAGGTTGGGCTCGGTGCCGACCTTGTGAGGTTGAATGGGA
____________________________________________________________
consensus AGAACCTGCCCTTGGTTGGCGAGGTTGGGCTCGGTGCCGACCTTGTGAGGTTGAATGGGA
. : . : . : . : . : . :
rJMFF022N03+ ACGCTATGTGCTCCCCGGGCATGTCCTGTGACTCGGCCCTACAAGTGACCTACATTGTGA
rJMFF014A19+ ATGCCATGTGCTCCCCGGGCATGTCCTGTGACTCGGCGCTACAGGTGACCTACATTGTGA
rJMSF003J01+ ACGCTATGTGCTCCCCGGGCATGTCCTGTGACTCGGCCCTACAAGTGACCTACATTGTGA
____________________________________________________________
consensus ACGCTATGTGCTCCCCGGGCATGTCCTGTGACTCGGCCCTACAAGTGACCTACATTGTGA
. : . : . : . : . : . :
rJMFF022N03+ GAGGGAGCGGTCGTGCTCAGGTCGTTGGTGTGGATGGCAAGCGCGTCTTGGAAACGACAG
rJMFF014A19+ GAGGGAGCGGTCGTGCTCAGGTCGTTGGTGTGGATGGCAAGCGCGTCTTGGAAACGACAG
rJMSF003J01+ GAGGGAGCGGTCGTGCTCAGGTCGTTGGTGTGGATGGCAAGCGCGTCTTGGAAACGACAG
____________________________________________________________
consensus GAGGGAGCGGTCGTGCTCAGGTCGTTGGTGTGGATGGCAAGCGCGTCTTGGAAACGACAG
. : . : . : . : . : . :
rJMFF022N03+ TCAAAGCTGGAAACTTGTTCATCGTGCCAAGGTTCTTCGTTGTCTCGAAGATTTCGGGCC
rJMFF014A19+ TCAAAGCCGGAAACTTGTTCATCGTGCCAAGGTTCTTCGTTGTCTCCAAGATTTCGGACC
rJMSF003J01+ TCAAAGCTGGAAACTTGTTCATCGTGCCAAGGTTCTTCGTTGTCTCGAAGATTTCGGGCC
rJMFF047M23+ TCGTGCCAAGGTTCTTCGTNGTCTCCAAGATTTCGGACC
____________________________________________________________
consensus TCAAAGCTGGAAACTTGTTCATCGTGCCAAGGTTCTTCGTTGTCTCGAAGATTTCGGGCC
. : . : . : . : . : . :
rJMFF022N03+ CCGACGGCTTGGAGTGGTTCTCCATCATCACTACACCCAACCCCATTTTCACTC-TCTGG
rJMFF014A19+ CCGATGGCTTGGAGTGGTTCTCCATCATCACTACACCCAACCCCATTTTCACTCATCTGG
rJMSF003J01+ CCGACGGCTTGGAGTGGTTCTCCATCATCACTACACCCAACCCCATTTTCACTC-TCTGG
rJMFF047M23+ CCGATGGCTTGGAGTGGTTCTCCATCATCACTACACCCAACCCCATTTTCACTCATCTGG
____________________________________________________________
consensus CCGATGGCTTGGAGTGGTTCTCCATCATCACTACACCCAACCCCATTTTCACTCATCTGG
. : . : . : . : . : . :
rJMFF022N03+ CAGGAAGAACCTCGGTGTGGAAGGCGTTGTCGCCTCAAGTTCTCCAGGCGGCTTTCAATG
rJMFF014A19+ CGGGAAGAACCTCGGTGTGGAAGGCGTTATCCCCTCAAGTTCTCCAGGCGGCTTTCAATG
rJMSF003J01+ CAGGAAGAACCTCGGTGTGGAAGGCGTTGTCGCCTCAAGTTCTCCAGGCGGCTTTCAATG
rJMFF047M23+ CGGGAAGAACCTCGGTGTGGAAGGCGTTATCCCCTCAAGTTCTCCAGGCGGCTTTCAATG
____________________________________________________________
consensus CGGGAAGAACCTCGGTGTGGAAGGCGTTGTCGCCTCAAGTTCTCCAGGCGGCTTTCAATG
. : . : . : . : . : . :
rJMFF022N03+ TTCCTGCAGAGGTGGAGAAAGAGTTCAGCTCCAAGAGGACTGCAGAGGAGATATTCTTCC
rJMFF014A19+ TTCCTGCAGAGGTGGAGAAAGAGTTCAGCTCCAAGAGGACTGCAGAGGAGATATTCTTCC
rJMSF003J01+ TTCCTGCAGAGGTGGAGAAAGAGTTCAGCTCCAAGAGGACTGCAGAGGAGATATTCTTCC
rJMFF047M23+ TTCCTGCAGAGGTGGAGAAAGAGTTCAGCTCCAAGAGGACTGCAGAGGAGATATTCTTCC
____________________________________________________________
consensus TTCCTGCAGAGGTGGAGAAAGAGTTCAGCTCCAAGAGGACTGCAGAGGAGATATTCTTCC
. : . : . : . : . : . :
rJMFF022N03+ CACCA
rJMFF014A19+ CACCA
rJMSF003J01+ CACCA
rJMFF047M23+ CACCAAACTAGGAGTGTAAATCTAGATGTGTACCCCATAATTATGTGCTCTACAAGCTTA
____________________________________________________________
consensus CACCAAACTAGGAGTGTAAATCTAGATGTGTACCCCATAATTATGTGCTCTACAAGCTTA
. : . : . : . : . : . :
rJMFF047M23+ ATTATGGAGTTGAATGCTATGCTAAGGATATTGCACTCCAATTTTAATTTGTTGGACAAA
____________________________________________________________
consensus ATTATGGAGTTGAATGCTATGCTAAGGATATTGCACTCCAATTTTAATTTGTTGGACAAA
. : . : . : . : . : . :
rJMFF047M23+ ATTGTTATTACGATGTTAACAAATTTAGCAATTGCACATAAATTCTAATTGGCAAAAATA
____________________________________________________________
consensus ATTGTTATTACGATGTTAACAAATTTAGCAATTGCACATAAATTCTAATTGGCAAAAATA
. : . : . : . : . : . :
rJMFF047M23+ TCACTATGTCACCTATGGCCAAGTTCAAATTTGTGGACTAACCAAGGGTTAAAAATAAAG
____________________________________________________________
consensus TCACTATGTCACCTATGGCCAAGTTCAAATTTGTGGACTAACCAAGGGTTAAAAATAAAG