Contig 011201:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047M01Sequence474007483 (3)463011201 (2)ref|XP_004241802.1|3e-18PREDICTED: protein TIFY 8 [Solanum lycopersicum]
JMSF019F04Sequence255007483 (3)763011201 (2)ref|XP_006353654.1|3e-48PREDICTED: protein TIFY 8-like [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF019F04+                                                              GGGTATCA
                      ____________________________________________________________
consensus                                                                 GGGTATCA
 
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rJMSF019F04+          AGCCCCCCCGGCCAACAGGTTTCGAGACAACAATGCTGGTCCTTCGGTGATATCCCAAGC
                      ____________________________________________________________
consensus             AGCCCCCCCGGCCAACAGGTTTCGAGACAACAATGCTGGTCCTTCGGTGATATCCCAAGC
 
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rJMSF019F04+          AGCTGCTGATGAAGGATCAAGAACGGGAATCAAAGGGTCTGGGATTTTGAGATCCATCAA
                      ____________________________________________________________
consensus             AGCTGCTGATGAAGGATCAAGAACGGGAATCAAAGGGTCTGGGATTTTGAGATCCATCAA
 
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rJMSF019F04+          TACGAGTGCTGGAATGTCAGATAGAACCCTCTCCGGGGTGCCACTAAGTGGCTGTAAACC
                      ____________________________________________________________
consensus             TACGAGTGCTGGAATGTCAGATAGAACCCTCTCCGGGGTGCCACTAAGTGGCTGTAAACC
 
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rJMSF019F04+          GAGCTTTGGGGTTCAAAGCTCTGAGCCCGAATCTTCTAATCCAAGGTAAATGGAATTCGA
                      ____________________________________________________________
consensus             GAGCTTTGGGGTTCAAAGCTCTGAGCCCGAATCTTCTAATCCAAGGTAAATGGAATTCGA
 
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rJMSF019F04+          AAGAGCAGGCTAACTGTTTCAAAATTTCTTCTTTTAATATGAAAGTTGTTTTGTGACAGT
                      ____________________________________________________________
consensus             AAGAGCAGGCTAACTGTTTCAAAATTTCTTCTTTTAATATGAAAGTTGTTTTGTGACAGT
 
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rJMSF019F04+          CGGCAAGGAGTGGGATTTGCGGGCCATCAAATGACGATATTTTATGGTGGTCAAGCACAT
                      ____________________________________________________________
consensus             CGGCAAGGAGTGGGATTTGCGGGCCATCAAATGACGATATTTTATGGTGGTCAAGCACAT
 
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rJMSF019F04+          GTTTTTGATGATGTACACCCCAACAAGATCTTATTATGGCCTTAGCTGGTTCAAATGGAG
rJMFF047M01+                                   AGATCTTATTATGGCCTTAGCTGGTTCAAATGGAG
                      ____________________________________________________________
consensus             GTTTTTGATGATGTACACCCCAACAAGATCTTATTATGGCCTTAGCTGGTTCAAATGGAG
 
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rJMSF019F04+          GGTCTTGGTCCACGACGTATGCTCCAAAATCTGCAGGACGAGTGTCCGGTGAGAAAAATG
rJMFF047M01+          GGTC-TGGTCCACGACGTATGCTCCAAAATCTGCAGGACGAGTGTCCGGTGAGAAAAATG
                      ____________________________________________________________
consensus             GGTCTTGGTCCACGACGTATGCTCCAAAATCTGCAGGACGAGTGTCCGGTGAGAAAAATG
 
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rJMSF019F04+          TTGTGCCTGCTGGCGAGAACGAGACAGGTGCGGGAAGTGGCTCAGCCATACTACGAGAAT
rJMFF047M01+          TTGTGCCTGCTGGCGAGAACGAGACAGGTGCGGGAAGTGGCTCAGCCATACTACGAGAAT
                      ____________________________________________________________
consensus             TTGTGCCTGCTGGCGAGAACGAGACAGGTGCGGGAAGTGGCTCAGCCATACTACGAGAAT
 
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rJMSF019F04+          TGCAAGGGAGAGCATCGTTAAGAGTCGGCTCCAGTCGCCCATTTGTATCCGGTGACCAAA
rJMFF047M01+          TGCAAGGGAGAGCATCGTTAAGAGTCGGCTCCAGTCGCCCATTTGTATCCGGTGACCAAA
                      ____________________________________________________________
consensus             TGCAAGGGAGAGCATCGTTAAGAGTCGGCTCCAGTCGCCCATTTGTATCCGGTGACCAAA
 
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rJMSF019F04+          GTTTTCTTCCCCCAGGTAACCATC-ATGTGGTAGCATGAGCAAGGAAACCAGAACTGCAG
rJMFF047M01+          GTTTTCTTCCCCCAGGTAACCATCAAGGTGGTAGCATGAGCAAGGAAACCAGAACTGCAG
                      ____________________________________________________________
consensus             GTTTTCTTCCCCCAGGTAACCATCAATGTGGTAGCATGAGCAAGGAAACCAGAACTGCAG
 
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rJMSF019F04+          TTCAGGTAGCAGAAGCCCTTAATGAAGAAAAGAATGATGTATGATAGATGTAAATTTGTT
rJMFF047M01+          TTCAGGTAGCAGAAGCCCTTAATGAAGAAAAGAATGATGTATGATAGATGTAAATTTGTT
                      ____________________________________________________________
consensus             TTCAGGTAGCAGAAGCCCTTAATGAAGAAAAGAATGATGTATGATAGATGTAAATTTGTT
 
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rJMSF019F04+          GGTCATTTTGCTATATTATTAGCTTCCTA                               
rJMFF047M01+          GGTCATTTTGCTATATTATTAGCTTCCTAATTTCACTTATATTTAAACTCTCTTCAATAT
                      ____________________________________________________________
consensus             GGTCATTTTGCTATATTATTAGCTTCCTAATTTCACTTATATTTAAACTCTCTTCAATAT
 
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rJMFF047M01+          GACCTTGCTTTCTCTAGCGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             GACCTTGCTTTCTCTAGCGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG