| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015I02 | Sequence | 541 | 003160 (7) | ref|XP_004230008.1| | 2e-40 | PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum] | 425 | 011194 (6) | ref|XP_009596448.1| | 4e-09 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis] |
| JMFF021O09 | Sequence | 501 | 003160 (7) | ref|XP_009596448.1| | 1e-38 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis] | 383 | 011194 (6) | |||
| JMFF042L01 | Sequence | 642 | 003160 (7) | ref|XP_009596448.1| | 5e-52 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis] | 255 | 011194 (6) | |||
| JMFF047D18 | Sequence | 614 | 003160 (7) | ref|XP_009596448.1| | 2e-58 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis] | 524 | 011194 (6) | ref|XP_009794987.1| | 2e-27 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana sylvestris] |
| JMFS150G01 | Sequence | 210 | 011194 (6) | ref|XP_009596448.1| | 5e-11 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis] | |||||
| JMSF040L11 | Sequence | 675 | 003160 (7) | ref|XP_009596448.1| | 7e-90 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana tomentosiformis] | 618 | 011194 (6) | ref|XP_009794987.1| | 7e-42 | PREDICTED: mitochondrial chaperone BCS1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF040L11+ CTCCGGCCG
____________________________________________________________
consensus CTCCGGCCG
. : . : . : . : . : . :
rJMSF040L11+ GGCAGAATNGACGTCCNCATCCNCTTTCCCTTGTGNGATTTCAACTCCTTCAAATGTTTA
____________________________________________________________
consensus GGCAGAATNGACGTCCNCATCCNCTTTCCCTTGTGNGATTTCAACTCCTTCAAATGTTTA
. : . : . : . : . : . :
rJMSF040L11+ GCAAACAGCTACTTAGGNGTAAAAGNGCNCNAGCTGTTTCCCCNGGTGGNGGNGATTTTT
____________________________________________________________
consensus GCAAACAGCTACTTAGGNGTAAAAGNGCNCNAGCTGTTTCCCCNGGTGGNGGNGATTTTT
. : . : . : . : . : . :
rJMSF040L11+ CAGACCGGCGCGACGTTGAGCCCGGCGGAAATNGGAGAACTAATGCTGGTGCNCCGGAGC
rJMFF047D18+ TGAGCCCGGCGGAAATCGGAGAACTAATGCTGGTGCACCGGAGC
____________________________________________________________
consensus CAGACCGGCGCGACGTTGAGCCCGGCGGAAATCGGAGAACTAATGCTGGTGCACCGGAGC
. : . : . : . : . : . :
rJMSF040L11+ TNCCCGAGCCGCGCCNTTAAGACGGTGATCNCGGCGCTGCNGACGGACGGAAGACCCGGC
rJMFF015I02+ CCCGAGCCGNGCCNTTAAGGNGGNGATCNCGGCGCTGCNGACGGACGGAAGACCCGGC
rJMFF047D18+ TCCCCGAGCCGCGCCATTAAGACGGTGATCACGGCGCTGCAGACGGACGGAAGACACGGC
____________________________________________________________
consensus TCCCCGAGCCGCGCCATTAAGACGGTGATCACGGCGCTGCAGACGGACGGAAGACCCGGC
. : . : . : . : . : . :
rJMSF040L11+ GGGAGATGGCGTCGGTTGACCGAAATNTNGTNTCTGGNGACGCCGCCGCGGCCGATTAGT
rJMFF015I02+ GGGAGATGGNGTCGGTTGACCGAAATTTTGTTTTTGGGGACGCCNCCGCGGCCGATTAGT
JMFS150G01+ CGCGGCCGATTAGT
rJMFF047D18+ GGGAGATGGCGTCGGTTGACCGAAATCTCGTCTCTGGCGACGCCGCCGCGGCCGATTAGT
____________________________________________________________
consensus GGGAGATGGCGTCGGTTGACCGAAATTTTGTTTCTGGGGACGCCGCCGCGGCCGATTAGT
. : . : . : . : . : . :
rJMSF040L11+ GCGGACGAGCAAGGTTGCGCCCCCNGGAAAGATACCGTCCCNGTAGCCNAGGAGTTCCGG
rJMFF015I02+ GCGGNCGNGCAAGGTTGNGCCCCCTGGAAAGATNCCGTCCCNGTAGCCNAGGNGTTCCGG
rJMFF021O09+ CCGTCCCNGTANCCNAGGAGTTNCGG
JMFS150G01+ GCGGACGAGCAAGGCTGCGCCACCTGGAAAGATACCGTCCCTGTAGCCAAGGAGTTCCGG
rJMFF047D18+ GCGGACGAGCAAGGTTGCGCCACCTGGAAAGATACCGTCCCTGTAGCCAAGGAGTTCCGG
____________________________________________________________
consensus GCGGACGAGCAAGGTTGCGCCCCCTGGAAAGATACCGTCCCTGTAGCCAAGGAGTTCCGG
. : . : . : . : . : . :
rJMSF040L11+ AAGCTGTNCGGACTGTTGAGAATGAAAAGCGCCNAGAGATTTGAACCTTTGGATCNTGAT
rJMFF015I02+ AAGCTGTNCGGNCTGTTGNGAANGAAAAGCGCCAAGNGATTTGAACCTTTGGATCATGAT
rJMFF042L01+ CTGTACGGACTGTTGAGAATGAAAAGCGCCAAGAGATTTGAACCTTTGGATCATGAT
rJMFF021O09+ AANCTGTTCGGNCTNTTGAGAANGAAAANNGCCNAGAGATTTGAACCTTTGGATCANGAT
JMFS150G01+ AAGCTGTACGGACTGTTGAGAATGAAAAGCGCCAAGAGATCTGAACCTCTGGATCATGAT
rJMFF047D18+ AAGCTGTACGGACTGTTGAGAATGAAAAGCGCCAAGAGATCTGAACCTCTGGATCATGAT
____________________________________________________________
consensus AAGCTGTACGGACTGTTGAGAATGAAAAGCGCCAAGAGATTTGAACCTTTGGATCATGAT
. : . : . : . : . : . :
rJMSF040L11+ TTGGAATCAATCCAACGGTGAACNTTTTNTTACAAAAAGATAATCAAAATNTTCTTT-AA
rJMFF015I02+ TTGGAATCAATCCNACGGNGAACNTTTTNTTNCAAAAAGATAATCAAAATTTTTTTTAAA
rJMFF042L01+ TTGGAATCAATCCAACGGTGAACATTTTATTACAAAAAGATAATCAAAATTTTTTTTAAA
rJMFF021O09+ TTGGAATCAATCCNACGGNGNACNTTTTNTTTCAAAAAGATAATCAAAATTTTTTTTAAA
JMFS150G01+ TTGGAATCAATCCAACGGTGAACATTTTATTACAAAAAGATAATCAAAATCTCCTTAAAA
rJMFF047D18+ TTGGAATCAATCCAACGGTGAACATTTTATTACAAAAAGATAATCAAAATCTTCTTTAAA
____________________________________________________________
consensus TTGGAATCAATCCAACGGTGAACATTTTATTACAAAAAGATAATCAAAATTTTTTTTAAA
. : . : . : . : . : . :
rJMSF040L11+ AAAAAAAAATATTTTTGTAATTTGTCAATCTTATCATTGATACAGCAAGTAAGATTAAAG
rJMFF015I02+ AAAAAAAAATATTTTTGTAATTTGTCAATCTTATCATTGATACAGCAAGTAAGATTAAAG
rJMFF042L01+ AAAAAAAAATATTTTTGTAATTTGTCAATCTTATCATTGATACAGCAAGTAAGATTAAAG
rJMFF021O09+ AAAAAAAAATATTTTTGTAATTTGTCAATCTTATCATTGATACAGCAAGTAAGATTAAAG
JMFS150G01+ AAAAAAAAA
rJMFF047D18+ AAAAAAAAATATTTTTGTAATTTGTCAATCTTATCATTGATACAGCAAGTAAGATTAAAG
____________________________________________________________
consensus AAAAAAAAATATTTTTGTAATTTGTCAATCTTATCATTGATACAGCAAGTAAGATTAAAG
. : . : . : . : . : . :
rJMSF040L11+ ATTTAGGATTTTGTTTAAACTTGTGGTTGAGCTCCGCCCTTGTAAGCCGTACGATGTAAA
rJMFF015I02+ ATTTAGGATTTTGTTTAAACTTGTGGTTGAGCTCCGCCCTTGTAAGCCGTACGAT
rJMFF042L01+ ATTTAGGATTTTGTTTAAACTTGTGGTTGAGCTCCGCCCTTGTAAGCCGTACGATGTAAA
rJMFF021O09+ ATTTAGGATTTTGTTTAAACTTGTGGTTGAGCTCCGCCCTTGTAAGCCGTACGATGTAAA
rJMFF047D18+ ATTTAGGATTTTGTTTAAACTTGTGGTTGAGCTCCGCCCTTGTAAGCCGTACGATGTAAA
____________________________________________________________
consensus ATTTAGGATTTTGTTTAAACTTGTGGTTGAGCTCCGCCCTTGTAAGCCGTACGATGTAAA
. : . : . : . : . : . :
rJMSF040L11+ TGCTAAT
rJMFF042L01+ TGCTAATGTTTTATTGG
rJMFF021O09+ TGCTAAT
rJMFF047D18+ TGCTAATGTTTTATTGGATTAAATATAGGTTATGGGGAAAGATGAGATCAATTTGATACT
____________________________________________________________
consensus TGCTAATGTTTTATTGGATTAAATATAGGTTATGGGGAAAGATGAGATCAATTTGATACT