Contig 011189:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF046L02-                                    ACGAAGCAAAAGAACAATTAAAATTTGAGTATTTT
                      ____________________________________________________________
consensus                                      ACGAAGCAAAAGAACAATTAAAATTTGAGTATTTT
 
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JMFF046L02-           CCTTTGTAATATAAATATATAATTTCCTTTTCCGATGATTATCATCAATGGCGGATCCAT
JMFF001M12-                                                   ATCATCAATGGCGGATCCAT
JMFF042A04-                                                              CGGATCCAT
                      ____________________________________________________________
consensus             CCTTTGTAATATAAATATATAATTTCCTTTTCCGATGATTATCATCAATGGCGGATCCAT
 
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JMFF046L02-           ACGGAACAGGCCATCACTCTCTCGAACCGGAGGATATGTCTTCGTTTCTCCAAAATCTTC
JMFF001M12-           ACGGAACAGGCCATCACTCTCTCGAACCGGAGGATATGTCTTCGTTTCTCCAAAATCTTC
JMFF042A04-           ACGGAACAGGCCATCACTCTCTCGAACCGGAGGATATGTCTTCGTTTCTCCAAAATCTTC
                      ____________________________________________________________
consensus             ACGGAACAGGCCATCACTCTCTCGAACCGGAGGATATGTCTTCGTTTCTCCAAAATCTTC
 
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JMFF046L02-           TCCACGGCGCATCCACTTCAGCTGATGGAGACGACGGCGGGGTGCTGTTCCCTCGCCCGG
JMFF001M12-           TCCACGGCGCATCCACTTCAGCTGATGGAGACGACGGCGGGGTGCTGTTCCCTCGCCCGG
JMFF042A04-           TCCACGGCGCATCCACTTCAGCTGATGGAGACGACGGCGGGGTGCTGTTCCCTCGCCCGG
                      ____________________________________________________________
consensus             TCCACGGCGCATCCACTTCAGCTGATGGAGACGACGGCGGGGTGCTGTTCCCTCGCCCGG
 
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JMFF046L02-           CGATGGAGGCTATGGATTTCATGGGTCGGATGAGAGACGGAGCTTCTGCTCCTGCGATCG
JMFF001M12-           CGATGGAGGCTACGGATTTCATGGGTCGGATGAGAGACGGAGCTTCTGCTCCTGCGATCG
JMFF042A04-           CGATGGAGGCTACGGATTTCATGGGTCGGATGAGAGACGGAGCTTCTGCTCCTGCGATCG
                      ____________________________________________________________
consensus             CGATGGAGGCTACGGATTTCATGGGTCGGATGAGAGACGGAGCTTCTGCTCCTGCGATCG
 
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JMFF046L02-           AGCCATCTCCGAGCCTGAATTTCTCCGATCCTTCTTTATTTTACGGAGCGCAAGTGAAAG
JMFF001M12-           AGCCATCTCCGAGCCTGAATTTCTCCGATCCTTCTTTATTTTACGGAGCGCAAGTGAAAG
JMFF042A04-           AGCCATCTCCGAGCCTGAATTTCTCCGATCCTTCTTTATTTTACGGAGCGCAAGTGAAAG
                      ____________________________________________________________
consensus             AGCCATCTCCGAGCCTGAATTTCTCCGATCCTTCTTTATTTTACGGAGCGCAAGTGAAAG
 
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JMFF046L02-           AAAGTGCAGTCAATGCGTTCTCCTCGGCCGCAATTGGGGATTTTGATGCAACTGGCTCTT
JMFF001M12-           AAAGTGCAGTCAATGCGTTCTCCTCGGCCGCAATTGGGGATTTTGATGCAACTGGCTCTT
JMFF042A04-           AAAGTGCAGTCAATGCGTTCTCCTCGGCCGCAATTGGGGATTTTGATGCAACTGGCTCTT
                      ____________________________________________________________
consensus             AAAGTGCAGTCAATGCGTTCTCCTCGGCCGCAATTGGGGATTTTGATGCAACTGGCTCTT
 
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JMFF046L02-           CCAAGCGGATTGAGTTCGAAAATGATAACAAGGGTTGTGAAACTTCAGATGCACTGAGTA
JMFF001M12-           CCAAGCGGATTGAGTTCGAAAATGATAACAAGGGTTGTGAAACTTCAGATGCACTGAGTA
JMFF042A04-           CCAAGCGGATTGAGTTCGAAAATGATAACAAGGGTTGTGAAACTTCAGATGCACTGAGTA
                      ____________________________________________________________
consensus             CCAAGCGGATTGAGTTCGAAAATGATAACAAGGGTTGTGAAACTTCAGATGCACTGAGTA
 
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JMFF046L02-           ATCTGGCTCAGCCGCGGCCCTCGAAGAGGAGCAGATCAGCAGAGGTTCATAATTTGTCTG
JMFF001M12-           ATCTGGCTCAGCCGCGGCCCTCGAAGAGGAGCAGATCAGCAGAGGTTCATAATTTGTCTG
JMFF042A04-           ATCTGGCTCAGCCGCGGCCCTCGAAGAGGAGCAGATCAGCAGAGGTTCATAATTTGTCTG
                      ____________________________________________________________
consensus             ATCTGGCTCAGCCGCGGCCCTCGAAGAGGAGCAGATCAGCAGAGGTTCATAATTTGTCTG
 
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JMFF046L02-           AAA                                                         
JMFF001M12-           AAAAGAGGAGAAGGAGCCGGATCAATGAGAAACTTAAAGCGTTACAGACCTTGATTCCAA
JMFF042A04-           AAAAGAGGAGAAGGAGCCGGATCAATGAGAAACTTAAAGCGTTACAGACCTTGATTCCAA
                      ____________________________________________________________
consensus             AAAAGAGGAGAAGGAGCCGGATCAATGAGAAACTTAAAGCGTTACAGACCTTGATTCCAA
 
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JMFF001M12-           ATTCTAACAAAACAGACAAGGCATCAATGCTGGATGAAGCCATTGAATAT          
JMFF042A04-           ATTCTAACAAAACAGACAAGGCATCAATGCTGGATGAAGCCATTGAATATTTGAAACAGC
rJMFF001M12+                         ACAAGGCATCAATGCTGGATGAAGCCATTGAATATTTGAAACAGC
                      ____________________________________________________________
consensus             ATTCTAACAAAACAGACAAGGCATCAATGCTGGATGAAGCCATTGAATATTTGAAACAGC
 
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JMFF042A04-           TTCAACTGCAAGTGCAGATGCTGACCATGCGGAATGGATTGAACTTGTACCCGGGTTATT
rJMFF001M12+          TTCAACTGCAAGTGCAGATGCTGACCATGCGGAATGGATTGAACTNGTACCCGGGTTATT
                      ____________________________________________________________
consensus             TTCAACTGCAAGTGCAGATGCTGACCATGCGGAATGGATTGAACTTGTACCCGGGTTATT
 
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JMFF042A04-           TCCAGGGATCCTTACAATCAGTCCAACTGCCTTCAT                        
rJMFF001M12+          TCCAGGGATCCTTACAATCAGTCCAACTGCCTTCATNTGGGGGTGAATTTGACAAAGGAA
                      ____________________________________________________________
consensus             TCCAGGGATCCTTACAATCAGTCCAACTGCCTTCATNTGGGGGTGAATTTGACAAAGGAA
 
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rJMFF001M12+          ATGCAATGCTGAACACAAGAGGATCAGCAGCTACTTTTTCTGGAAACCAAGAAATCTTAG
                      ____________________________________________________________
consensus             ATGCAATGCTGAACACAAGAGGATCAGCAGCTACTTTTTCTGGAAACCAAGAAATCTTAG
 
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rJMFF001M12+          CTCAGACCAGCAGCTTTCAGATTTCTAATCAAAATTCCACAGCCCATCAAACTATGGAAA
rJMFF042A04+             AGACCAGCAGCTTTCAGATTTCTAATCAAAATTCCACAGCCCATCAAACTATGGAAA
                      ____________________________________________________________
consensus             CTCAGACCAGCAGCTTTCAGATTTCTAATCAAAATTCCACAGCCCATCAAACTATGGAAA
 
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rJMFF001M12+          ATAACACTGCTAATTCAGAGAACCCAATAGCTCTGGGAACATCAATTCAAAACCATTATG
rJMFF042A04+          ATAACACTGCTAATTCAGAGAACCCAATAGCTCTGGGAACATCAATTCAAAACCATTATG
                      ____________________________________________________________
consensus             ATAACACTGCTAATTCAGAGAACCCAATAGCTCTGGGAACATCAATTCAAAACCATTATG
 
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rJMFF001M12+          GACTTCTTAACCAGTTGGCATCTACTAAGGATCTGTGCAGGGACGATGCACTATCAAGAT
rJMFF042A04+          GACTTCTTAACCAGTTGGCATCTACTAAGGATCTGTGCAGGGACGATGCACTATCAAGAT
                      ____________________________________________________________
consensus             GACTTCTTAACCAGTTGGCATCTACTAAGGATCTGTGCAGGGACGATGCACTATCAAGAT
 
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rJMFF001M12+          TGCATTTAGAGACGAGTTGCTCTGGGAACAATTCATCACCGGGCATCTCTTCTTAGTCAG
rJMFF042A04+          TGCATTTAGAGACGAGTTGCTCTGGGAACAATTCATCACCGGGCATCTCTTCTTAGTCAG
                      ____________________________________________________________
consensus             TGCATTTAGAGACGAGTTGCTCTGGGAACAATTCATCACCGGGCATCTCTTCTTAGTCAG
 
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rJMFF001M12+          CAAAGAAATACAGTGTCGGCAGTGTCCTTTTGGTCCATCTTCCATCCCCATACGGCCTCC
rJMFF042A04+          CAAAGAAATACAGTGTCGGCAGTGTCCTTTTGGTCCATCTTCCATCCCCATACGGCCTCC
rJMFF046L02+                    CAGTGTCGGCAGTGTCCTTTTGGTCCATCTTCCATCCCCATACGGCCTCC
                      ____________________________________________________________
consensus             CAAAGAAATACAGTGTCGGCAGTGTCCTTTTGGTCCATCTTCCATCCCCATACGGCCTCC
 
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rJMFF001M12+          CAACTCCTCGACAGGGATCCAGGAAATGCCAATCCGGGGTACAAAAAAACTTCTCATAAT
rJMFF042A04+          CAACTCCTCGACAGGGATCCAGGAAATGCCAATCCGGGGTACAAAAAAACTTCTCATAAT
rJMFF046L02+          CAACTCCTCGACAGGGATCCAGGAAATGCCAATCCGGGGTAC-AAAAAACTTCTCATAAT
                      ____________________________________________________________
consensus             CAACTCCTCGACAGGGATCCAGGAAATGCCAATCCGGGGTACAAAAAAACTTCTCATAAT
 
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rJMFF001M12+          CCCATCACCGTCAAAATGGTTAACACAATAAGTTATCTTATGACATAATTTGCTATTAAT
rJMFF042A04+          CCCATCACCGTCAAAATGGTTAACACAATAAGTTATCTTATGACATAATTTGCTATTAAT
rJMFF046L02+          CCCATCACCGTCAAAATGGTTAACACAATAAGTTATCTTATGACATAATTTGCTATTAAT
                      ____________________________________________________________
consensus             CCCATCACCGTCAAAATGGTTAACACAATAAGTTATCTTATGACATAATTTGCTATTAAT
 
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rJMFF001M12+          TATTTACTAATTGTCAAATACTCTTTCCGATGTTAACCATTCTTGCATTCCTACAAGGGT
rJMFF042A04+          TATTTACTAATTGTCAAATACTCTTTCCGATGTTAACCATTCTTGCATTCCTACAAGGGT
rJMFF046L02+          TATTTACTAATTGTCAAATACTCTTTCCGATGTTAACCATTCTTGCATTCCTACAAGGGT
                      ____________________________________________________________
consensus             TATTTACTAATTGTCAAATACTCTTTCCGATGTTAACCATTCTTGCATTCCTACAAGGGT
 
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rJMFF001M12+          TGGTTTTCTGATTTTATAATTGTATTAGCAGTTTGTTTATTATTTATCTTAAGTTGTTGG
rJMFF042A04+          TGGTTTTCTGATTTTATAATTGTATTAGCAGTTTGTTTATTATTTATCTTAAGTTGTTGG
rJMFF046L02+          TGGTTTTCTGATTTTATAATTGTATTAGCAGTTTGTTTATTATTTATCTTAAGTTGTTGG
                      ____________________________________________________________
consensus             TGGTTTTCTGATTTTATAATTGTATTAGCAGTTTGTTTATTATTTATCTTAAGTTGTTGG
 
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rJMFF001M12+          GTG-TTTGAAATTAGAGTGCGGGACATG                                
rJMFF042A04+          GTGTTTTGAAATTAGAGTGCGGGACATGTTACCTTAATTAGAAATGTTGTCTCC      
rJMFF046L02+          GTGTTTTGAAATTAGAGTGCGGGACATGTTACCTTAATTAGAAATGTTGTCTCCATACAA
                      ____________________________________________________________
consensus             GTGTTTTGAAATTAGAGTGCGGGACATGTTACCTTAATTAGAAATGTTGTCTCCATACAA
 
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rJMFF046L02+          TTCTTCTTCXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTCTTCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG