Contig 011186:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF038A19+                                                          GAGCCGTTTTGG
                      ____________________________________________________________
consensus                                                             GAGCCGTTTTGG
 
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rJMFF038A19+          TTGATCGACTTCGCTAATGTTTGCATTGCCATTCATCTCGTCGGAGCTTACCAGGTTTTC
                      ____________________________________________________________
consensus             TTGATCGACTTCGCTAATGTTTGCATTGCCATTCATCTCGTCGGAGCTTACCAGGTTTTC
 
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rJMFF038A19+          TGTCAGCCAATCTTCGGGTTCGTGGAGTCACGCAGCAGCGAAAAATGGCCGGAGAGCAAA
                      ____________________________________________________________
consensus             TGTCAGCCAATCTTCGGGTTCGTGGAGTCACGCAGCAGCGAAAAATGGCCGGAGAGCAAA
 
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JMFN017O01-                                                          AAGGGTCAACTTT
rJMFF038A19+          TTCATAACGGCAGAATACGCGATCAGAATTCCATGCTTGGGAGCTTTAAGGGTCAACTTT
rJMFF046E17+                                                         AAGGGTCAACTTT
                      ____________________________________________________________
consensus             TTCATAACGGCAGAATACGCGATCAGAATTCCATGCTTGGGAGCTTTAAGGGTCAACTTT
 
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JMFN017O01-           TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCGGTGTTGGCCATGATCTTT
rJMFF038A19+          TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCGGTGTTGGCCATGATCTTT
rJMFF046E17+          TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCG--GTTGGCCATGATCTTT
                      ____________________________________________________________
consensus             TTCCGGCTGACATGGAGGACAACGTACGTGATAGTCACATCGGTGTTGGCCATGATCTTT
 
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JMFN017O01-           CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
rJMFF038A19+          CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
rJMFF046E17+          CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
                      ____________________________________________________________
consensus             CCGTTCTTCAATGACTTCCTGGGGTTGATCGGCGCCGCCTCGTTTTACCCGTTGACGGTG
 
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JMFN017O01-           TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
rJMFF038A19+          TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
rJMFF046E17+          TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
                      ____________________________________________________________
consensus             TACTTCCCCATCGAAATGCACATCGCTCAAGCCAAAATCCCCAAGTATTCATTCAGGTGG
 
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JMFN017O01-           ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
rJMFF038A19+          ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
rJMFF046E17+          ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
                      ____________________________________________________________
consensus             ACATGGCTGAAAATTCTGAGCTGGGCTTGCCTGTTCGTCTCCCTTGTGGCCGCCGCTGGA
 
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JMFN017O01-           TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
rJMFF038A19+          TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
rJMFF046E17+          TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
                      ____________________________________________________________
consensus             TCCATTCAGGGCCTCGCTTCCGACGTCAAAACATATAAACCTTTTAAAACTCAATGATAT
 
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JMFN017O01-           CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
rJMFF038A19+          CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
rJMFF046E17+          CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
                      ____________________________________________________________
consensus             CTCCATCCAGTTATTAGCAGTGTAGAATATGTAATAATAGTTTCAATAAAATGGATGGGA
 
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JMFN017O01-           TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
rJMFF038A19+          TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
rJMFF046E17+          TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
                      ____________________________________________________________
consensus             TTCTGATGGTTAATGCAAGTGTAGGATGTGTGTTTAGCAATTTTCATATTAAATTCAATG
 
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JMFN017O01-           CCAAAGATAGAGTTATGT                                          
rJMFF038A19+          CCAAAGATAGAGTTATGTAGTTGTTATTTGTTAAATATAACAATAAGGTCAGAGATTAGA
rJMFF046E17+          CCAAAGATAGAGTTATGTAGTTGTTATTTGTTAAATATAACAATAAGGTCAGAGATTAGA
                      ____________________________________________________________
consensus             CCAAAGATAGAGTTATGTAGTTGTTATTTGTTAAATATAACAATAAGGTCAGAGATTAGA
 
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rJMFF038A19+          CTTTTGTATGTTTACTATAT                                        
rJMFF046E17+          CTTTTGTATGTTTACTATATACATATAAAAGGTCATAAAATTAAGTAAAGTCATTAGTGC
                      ____________________________________________________________
consensus             CTTTTGTATGTTTACTATATACATATAAAAGGTCATAAAATTAAGTAAAGTCATTAGTGC