| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F07 | Sequence | 466 | 004651 (5) | gb|KJB27075.1| | 3e-10 | hypothetical protein B456_004G276400 [Gossypium raimondii] | 739 | 011185 (5) | gb|KDO80165.1| | 2e-103 | hypothetical protein CISIN_1g005652mg [Citrus sinensis] |
| JMFF011P06 | Sequence | 570 | 004651 (5) | gb|KDP30256.1| | 4e-26 | hypothetical protein JCGZ_17038 [Jatropha curcas] | 771 | 011185 (5) | gb|KDO80165.1| | 2e-111 | hypothetical protein CISIN_1g005652mg [Citrus sinensis] |
| JMFF038N18 | Sequence | 585 | 004651 (5) | gb|KDP30256.1| | 4e-28 | hypothetical protein JCGZ_17038 [Jatropha curcas] | 772 | 011185 (5) | gb|KDO80165.1| | 2e-111 | hypothetical protein CISIN_1g005652mg [Citrus sinensis] |
| JMFF046B21 | Sequence | 558 | 004651 (5) | gb|KDP30256.1| | 9e-24 | hypothetical protein JCGZ_17038 [Jatropha curcas] | 456 | 011185 (5) | gb|KDO80164.1| | 7e-34 | hypothetical protein CISIN_1g005652mg [Citrus sinensis] |
| JMSF043B15 | Sequence | 707 | 004651 (5) | ref|XP_009593351.1| | 5e-51 | PREDICTED: TBC1 domain family member 15 isoform X3 [Nicotiana tomentosiformis] | 708 | 011185 (5) | gb|KDO80165.1| | 9e-98 | hypothetical protein CISIN_1g005652mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMFF038N18+ TNGTCAGGGCATGAGTGATCT
rJMFF011P06+ CAGGGCATGAGTGATCT
____________________________________________________________
consensus TNGTCAGGGCATGAGTGATCT
. : . : . : . : . : . :
rJMFF004F07+ CTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
rJMSF043B15+ ATCTTTTTGGTGCTTTGTTGC
rJMFF038N18+ CCTTTCTCCTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
rJMFF011P06+ CCTTTCTCCTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
____________________________________________________________
consensus CCTTTCTCCTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
. : . : . : . : . : . :
rJMFF004F07+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
rJMSF043B15+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
rJMFF038N18+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
rJMFF011P06+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
____________________________________________________________
consensus ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
. : . : . : . : . : . :
rJMFF004F07+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
rJMSF043B15+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
rJMFF038N18+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
rJMFF011P06+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
____________________________________________________________
consensus TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
. : . : . : . : . : . :
rJMFF004F07+ GAAGGACTGCTTGAACTATTTATTNTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
rJMSF043B15+ GAAGGACTTCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
rJMFF038N18+ GAAGGACTGCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
rJMFF011P06+ GAAGGACTGCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
____________________________________________________________
consensus GAAGGACTGCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
. : . : . : . : . : . :
rJMFF004F07+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
rJMSF043B15+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
rJMFF038N18+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
rJMFF011P06+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
____________________________________________________________
consensus ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
. : . : . : . : . : . :
rJMFF004F07+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMSF043B15+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMFF038N18+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMFF011P06+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMFF046B21+ TGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
____________________________________________________________
consensus GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
. : . : . : . : . : . :
rJMFF004F07+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMSF043B15+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMFF038N18+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMFF011P06+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMFF046B21+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
____________________________________________________________
consensus AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
. : . : . : . : . : . :
rJMFF004F07+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMSF043B15+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMFF038N18+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMFF011P06+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMFF046B21+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
____________________________________________________________
consensus CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
. : . : . : . : . : . :
rJMFF004F07+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMSF043B15+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMFF038N18+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMFF011P06+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMFF046B21+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
____________________________________________________________
consensus TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
. : . : . : . : . : . :
rJMFF004F07+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTNTAACATGAT
rJMSF043B15+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
rJMFF038N18+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
rJMFF011P06+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
rJMFF046B21+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
____________________________________________________________
consensus TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
. : . : . : . : . : . :
rJMFF004F07+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMSF043B15+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMFF038N18+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMFF011P06+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMFF046B21+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
____________________________________________________________
consensus GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
. : . : . : . : . : . :
rJMFF004F07+ TATGGTTTCAATAATTTNTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMSF043B15+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMFF038N18+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMFF011P06+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMFF046B21+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
____________________________________________________________
consensus TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
. : . : . : . : . : . :
rJMFF004F07+ CATTTTGTATCATTTGT
rJMSF043B15+ CATTTTGTAT
rJMFF038N18+ CATTTTGTATCATTTGT
rJMFF011P06+ CATTTTGTATCATTTGT
rJMFF046B21+ CATTTTGTATCATTTGTTGAAATGCATATAAAATTATCTGCAGTTGGTAAAAAAAAAAAG
____________________________________________________________
consensus CATTTTGTATCATTTGTTGAAATGCATATAAAATTATCTGCAGTTGGTAAAAAAAAAAAG