Contig 011185:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004F07Sequence466004651 (5)gb|KJB27075.1|3e-10hypothetical protein B456_004G276400 [Gossypium raimondii]739011185 (5)gb|KDO80165.1|2e-103hypothetical protein CISIN_1g005652mg [Citrus sinensis]
JMFF011P06Sequence570004651 (5)gb|KDP30256.1|4e-26hypothetical protein JCGZ_17038 [Jatropha curcas]771011185 (5)gb|KDO80165.1|2e-111hypothetical protein CISIN_1g005652mg [Citrus sinensis]
JMFF038N18Sequence585004651 (5)gb|KDP30256.1|4e-28hypothetical protein JCGZ_17038 [Jatropha curcas]772011185 (5)gb|KDO80165.1|2e-111hypothetical protein CISIN_1g005652mg [Citrus sinensis]
JMFF046B21Sequence558004651 (5)gb|KDP30256.1|9e-24hypothetical protein JCGZ_17038 [Jatropha curcas]456011185 (5)gb|KDO80164.1|7e-34hypothetical protein CISIN_1g005652mg [Citrus sinensis]
JMSF043B15Sequence707004651 (5)ref|XP_009593351.1|5e-51PREDICTED: TBC1 domain family member 15 isoform X3 [Nicotiana tomentosiformis]708011185 (5)gb|KDO80165.1|9e-98hypothetical protein CISIN_1g005652mg [Citrus sinensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF038N18+ TNGTCAGGGCATGAGTGATCT
rJMFF011P06+ CAGGGCATGAGTGATCT
                      ____________________________________________________________
consensus TNGTCAGGGCATGAGTGATCT
 
. : . : . : . : . : . :
rJMFF004F07+ CTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
rJMSF043B15+ ATCTTTTTGGTGCTTTGTTGC
rJMFF038N18+ CCTTTCTCCTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
rJMFF011P06+ CCTTTCTCCTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
                      ____________________________________________________________
consensus CCTTTCTCCTATATTATATGTTATGAGAGACGAATCAGAATCTTTTTGGTGCTTTGTTGC
 
. : . : . : . : . : . :
rJMFF004F07+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
rJMSF043B15+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
rJMFF038N18+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
rJMFF011P06+ ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
                      ____________________________________________________________
consensus ACTAATGGAGCGACTTGGACCAAATTTTCAGCTTGATCAAAATGGAATGAACACTCAGCT
 
. : . : . : . : . : . :
rJMFF004F07+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
rJMSF043B15+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
rJMFF038N18+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
rJMFF011P06+ TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
                      ____________________________________________________________
consensus TTTTGCACTATCAAAGTTGGTGGAGTTGTTAGACGGCCTGTTGCATAATTACTTTAAACA
 
. : . : . : . : . : . :
rJMFF004F07+ GAAGGACTGCTTGAACTATTTATTNTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
rJMSF043B15+ GAAGGACTTCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
rJMFF038N18+ GAAGGACTGCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
rJMFF011P06+ GAAGGACTGCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
                      ____________________________________________________________
consensus GAAGGACTGCTTGAACTATTTATTCTGCTTCCGTTGGATTCTCATACAATTCAAAAGGGA
 
. : . : . : . : . : . :
rJMFF004F07+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
rJMSF043B15+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
rJMFF038N18+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
rJMFF011P06+ ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
                      ____________________________________________________________
consensus ATTTGAATTTGAGAAAACACTGCGGTTGTGGGAGGTTTTGTGGACACAGCATTTGACTGA
 
. : . : . : . : . : . :
rJMFF004F07+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMSF043B15+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMFF038N18+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMFF011P06+ GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
rJMFF046B21+ TGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
                      ____________________________________________________________
consensus GCATCTGCACCTTTATGTATGTGTTGCAATCCTGAAAAGATATCGGAGCAAAATAATCGG
 
. : . : . : . : . : . :
rJMFF004F07+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMSF043B15+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMFF038N18+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMFF011P06+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
rJMFF046B21+ AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
                      ____________________________________________________________
consensus AGAGAAGATGGATTTTGACACTCTACTGGAGTTTATAAATGAGCTGGGTGGTCATATTGA
 
. : . : . : . : . : . :
rJMFF004F07+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMSF043B15+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMFF038N18+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMFF011P06+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
rJMFF046B21+ CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
                      ____________________________________________________________
consensus CCTCGAAACAACCCTTAGGGATGCAGAGGCATTATGTCTTTGTGCTGGTGAATATGGTGC
 
. : . : . : . : . : . :
rJMFF004F07+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMSF043B15+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMFF038N18+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMFF011P06+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
rJMFF046B21+ TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
                      ____________________________________________________________
consensus TGCTCGCATCCCTCCTGGAACTCCACCCTCCTTGCCTATTCAGAATCTTCTGCTATTCTC
 
. : . : . : . : . : . :
rJMFF004F07+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTNTAACATGAT
rJMSF043B15+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
rJMFF038N18+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
rJMFF011P06+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
rJMFF046B21+ TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
                      ____________________________________________________________
consensus TCAAGAGGATGATGATGTAATGTAAGCTGAATTTTTGTGGAGTAAGACTTCTAACATGAT
 
. : . : . : . : . : . :
rJMFF004F07+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMSF043B15+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMFF038N18+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMFF011P06+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
rJMFF046B21+ GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
                      ____________________________________________________________
consensus GGGGCATGATAGTTCTAGGCTCCTAGAAAATCATTGGGGTATATTAAACCATTGTAAGTA
 
. : . : . : . : . : . :
rJMFF004F07+ TATGGTTTCAATAATTTNTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMSF043B15+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMFF038N18+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMFF011P06+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
rJMFF046B21+ TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
                      ____________________________________________________________
consensus TATGGTTTCAATAATTTCTGATTGAACCGGATCAACTTTCTTTTGTTAATTAGGAATTGC
 
. : . : . : . : . : . :
rJMFF004F07+ CATTTTGTATCATTTGT
rJMSF043B15+ CATTTTGTAT
rJMFF038N18+ CATTTTGTATCATTTGT
rJMFF011P06+ CATTTTGTATCATTTGT
rJMFF046B21+ CATTTTGTATCATTTGTTGAAATGCATATAAAATTATCTGCAGTTGGTAAAAAAAAAAAG
                      ____________________________________________________________
consensus CATTTTGTATCATTTGTTGAAATGCATATAAAATTATCTGCAGTTGGTAAAAAAAAAAAG