Contig 011182:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-                                           GTGAAGGAAAGCACTCTACGTGTTTCTG
                      ____________________________________________________________
consensus                                             GTGAAGGAAAGCACTCTACGTGTTTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           GTTGTCGTCTTCGCCATAACAGCGCCGTCTCTCTCTACAAAACTTTCACATTCTGTTGGC
JMFF045M10-                                                  AAACTTTCACATTCTGTTGGC
                      ____________________________________________________________
consensus             GTTGTCGTCTTCGCCATAACAGCGCCGTCTCTCTCTACAAAACTTTCACATTCTGTTGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           GCGGAGAGGGCAGAGGGAAGAAATGGCAGTTGGGGTGCTAGCTTTACAGGGATCTTTCAA
JMFF045M10-           GCGGAGAGGGCAGAGGGAAGAAATGGCAGTTGGGGTGCTAGCTTTACAGGGATCTTTCAA
                      ____________________________________________________________
consensus             GCGGAGAGGGCAGAGGGAAGAAATGGCAGTTGGGGTGCTAGCTTTACAGGGATCTTTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           CGAACACATAGCAGCGCTGAGGAGGCTTGGAGTGAAGGGAATAGAAATAAGGAAGGCAGA
JMFF045M10-           CGAACACATAGCAGCGCTGAGGAGGCTTGGAGTGAAGGGAATAGAAATAAGGAAGGCAGA
                      ____________________________________________________________
consensus             CGAACACATAGCAGCGCTGAGGAGGCTTGGAGTGAAGGGAATAGAAATAAGGAAGGCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           GCAGCTGCAGAGTGTCTCCTCCCTCATCATCCCTGGCGGTGAAAGCACCACCATGGCTAA
JMFF045M10-           GCAGCTGCAGAGTGTCTCCTCCCTCATCATCCCTGGCGGTGAAAGCACCACCATGGCTAA
                      ____________________________________________________________
consensus             GCAGCTGCAGAGTGTCTCCTCCCTCATCATCCCTGGCGGTGAAAGCACCACCATGGCTAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           GCTCGCCGAGTTTCACAACCTGTTTCCTGCATTGCGCGAGTTTGTGAAAATGGGAAAGCC
JMFF045M10-           GCTCGCCGAGTTTCACAACCTGTTTCCTGCATTGCGCGAGTTTGTGAAAATGGGAAAGCC
rJMFF013H11+                CGAGTTTCACAACCTGTTTCNTGCATTGCGCGAGTTTGTGAAAATGGGAAAGCC
                      ____________________________________________________________
consensus             GCTCGCCGAGTTTCACAACCTGTTTCCTGCATTGCGCGAGTTTGTGAAAATGGGAAAGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           AGTATGGGGGACTTGTGCAGGCCTTATTTTCTTGGCAGATAAAGCAGTTGGGCAGAAAAC
JMFF045M10-           AGTATGGGGGACTTGTGCAGGCCTTATTTTCTTGGCAGATAAAGCAGTTGGGCAGAAAAC
rJMFF013H11+          AGTATGGGGGACTTGTGCAGGCCTTATTTTCTTGGCAGATAAAGCAGTTGGGCAGAAAAC
                      ____________________________________________________________
consensus             AGTATGGGGGACTTGTGCAGGCCTTATTTTCTTGGCAGATAAAGCAGTTGGGCAGAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           TGGAGGGCAGGAACTCATTGGTGGCCTCGATTGTACTGTTCATCGAAACTTTTTCGGAAG
JMFF045M10-           TGGAGGGCAGGAACTCATTGGTGGCCTCGATTGTACTGTTCATCGAAACTTTTTCGGAAG
rJMFF013H11+          TGGAGGGCAGGAACTCATTGGTGGCCTCGATTGTACTGTTCATCGAAACTTTTTCGGAAG
                      ____________________________________________________________
consensus             TGGAGGGCAGGAACTCATTGGTGGCCTCGATTGTACTGTTCATCGAAACTTTTTCGGAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           CCAGATTCAAAGCTTTGAGACCGAGCTCGCTATTCCTGAAGTTGCAGCCAAAGAAGGTGG
JMFF045M10-           CCAGATTCAAAGCTTTGAGACCGAGCTCGCTATTCCTGAAGTTGCAGCCAAAGAAGGTGG
rJMFF013H11+          CCAGATTCAAAGCTTTGAGACCGAGCTCGCTATTCCTGAAGTTGCAGCCAAAGAAGGTGG
                      ____________________________________________________________
consensus             CCAGATTCAAAGCTTTGAGACCGAGCTCGCTATTCCTGAAGTTGCAGCCAAAGAAGGTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF013H11-           TCCTCCAACATTCCGTGCTGTTTTTATTCGTGCGCCTGCAATCCTTGAA           
JMFF045M10-           TCCTCCAACATTCCGTGCTGTTTTTATTCGTGCGCCTGCAATCCTTGAAGTAGGCCCAGA
rJMFF013H11+          TCCTCCAACATTCCGTGCTGTTTTTATTCGTGCGCCTGCAATCCTTGAAGTAGGCCCAGA
                      ____________________________________________________________
consensus             TCCTCCAACATTCCGTGCTGTTTTTATTCGTGCGCCTGCAATCCTTGAAGTAGGCCCAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF045M10-           TGTTGAGATTCTGGCAGATGTTCCAGCCTCATCTGTGATAACTG                
rJMFF013H11+          TGTTGAGATTCTGGCAGATGTTCCAGCCTCATCTGTGATAACTGAATCCGCGGAGTCTGA
rJMFF045M10+                                                     GAATCCGCGGAGTCTGA
                      ____________________________________________________________
consensus             TGTTGAGATTCTGGCAGATGTTCCAGCCTCATCTGTGATAACTGAATCCGCGGAGTCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          GCAGAAAGTGATCGTTGCTGTAAAACAAGGGAACATGCTAGCTACTGCTTTTCACCCTGA
rJMFF045M10+          GCAGAAAGTGATCGTTGCTGTAAAACAAGGGAACATGCTAGCTACTGCTTTTCACCCTGA
                      ____________________________________________________________
consensus             GCAGAAAGTGATCGTTGCTGTAAAACAAGGGAACATGCTAGCTACTGCTTTTCACCCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          ACTGACCGCTGATACACGGTGGCATAGTTACTTTTTGAAAATGGTGCCTGAATTTGGAGG
rJMFF045M10+          ACTTACCGCTGATACACGGTGGCATAGTTACTTTTTGAAAATGGTGCCTGAATTTGGAGG
                      ____________________________________________________________
consensus             ACTTACCGCTGATACACGGTGGCATAGTTACTTTTTGAAAATGGTGCCTGAATTTGGAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          AACATCAAGTATCATCACAACAACTGGTGAAGGTTCCAGCTTTTATGAACGACCAAAAAT
rJMFF045M10+          AACATCAAGTATCATCACAACAACTGGTGAAGGTTCCAGCTTTTATGAACGACCAAAAAT
                      ____________________________________________________________
consensus             AACATCAAGTATCATCACAACAACTGGTGAAGGTTCCAGCTTTTATGAACGACCAAAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          TGATCTTCCTGTTTTTCAATAGAAGCAAAAGAAGAAAAGGAGAATTAATACAATCACATC
rJMFF045M10+          TGATCTTCCTGTTTTTCAATAGAAGCAAAAGAAGAAAAGGAGAATTAATACAATCACATC
                      ____________________________________________________________
consensus             TGATCTTCCTGTTTTTCAATAGAAGCAAAAGAAGAAAAGGAGAATTAATACAATCACATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          ATATGATGAATGATAAGATAAAATAGGTTGTAAAAATGCTCTTTTCTTTATCTATTTATC
rJMFF045M10+          ATATGATGAATGATAAGATAAAATAGGTTGTAAAAATGCTCTTTTCTTTATCTATTTATC
                      ____________________________________________________________
consensus             ATATGATGAATGATAAGATAAAATAGGTTGTAAAAATGCTCTTTTCTTTATCTATTTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          ATTCAACTCACTTGTTTGCAATCTCGTAATAGTTTTTCTACATTTATTAGTTTTGCAGAT
rJMFF045M10+          ATTCAACTCACTTGTTTGCAATCTCGTAATAGTTTTTCTACATTTATTAGTTTTGCAGAT
                      ____________________________________________________________
consensus             ATTCAACTCACTTGTTTGCAATCTCGTAATAGTTTTTCTACATTTATTAGTTTTGCAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF013H11+          GTTCAAATTGTATCTT                                            
rJMFF045M10+          GTTCAAATTGTATCTTTTGCAAACTGCTTTATTAGAAATTTTAAATTAAATTCCTAATTC
                      ____________________________________________________________
consensus             GTTCAAATTGTATCTTTTGCAAACTGCTTTATTAGAAATTTTAAATTAAATTCCTAATTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF045M10+          TTATAATGGATACACTCCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTATAATGGATACACTCCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG