| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004A03 | Sequence | 583 | 004454 (5) | ref|XP_006353238.1| | 6e-32 | PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum] | 767 | 011176 (7) | ref|XP_009803816.1| | 4e-117 | PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris] |
| JMFF010E08 | Sequence | 634 | 004454 (5) | ref|XP_006353238.1| | 9e-43 | PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum] | 719 | 011176 (7) | ref|XP_009803816.1| | 7e-117 | PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris] |
| JMFF022C23 | Sequence | 533 | 004454 (5) | ref|XP_006353238.1| | 6e-20 | PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum] | 742 | 011176 (7) | ref|XP_009803816.1| | 6e-124 | PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris] |
| JMFF044N22 | Sequence | 646 | 004454 (5) | ref|XP_006353238.1| | 6e-46 | PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum] | 654 | 011176 (7) | ref|XP_009803816.1| | 1e-88 | PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris] |
| JMSF032I08 | Sequence | 676 | 004454 (5) | ref|XP_006353238.1| | 1e-50 | PREDICTED: protease Do-like 10, mitochondrial-like [Solanum tuberosum] | 811 | 011176 (7) | ref|XP_009803816.1| | 1e-137 | PREDICTED: protease Do-like 10, mitochondrial [Nicotiana sylvestris] |
| JMSF049O16 | Sequence | 493 | 011176 (7) | ref|XP_009611385.1| | 4e-61 | PREDICTED: protease Do-like 10, mitochondrial [Nicotiana tomentosiformis] | 444 | 011176 (7) | gb|EYU39504.1| | 6e-62 | hypothetical protein MIMGU_mgv1a003194mg [Erythranthe guttata] |
This contig is upended
. : . : . : . : . : . :
rJMSF032I08+ ACTTCAAATGGTCC
____________________________________________________________
consensus ACTTCAAATGGTCC
. : . : . : . : . : . :
rJMSF032I08+ AGAGTTGACTGGGTGCTGTGAGCAAAATCCACCCACTTTCTGATGCTTATAAGGTGTTGA
____________________________________________________________
consensus AGAGTTGACTGGGTGCTGTGAGCAAAATCCACCCACTTTCTGATGCTTATAAGGTGTTGA
. : . : . : . : . : . :
rJMSF032I08+ GAAAAGATGATATCATTCTCTCATTTGATGGCATACCTATAGCCAATGACGGAACAGTTC
rJMFF010E08+ ACGGAACAGTTC
rJMFF022C23+ TATAGCCAATGACGGAACAGTTC
rJMFF004A03+ AAAGATGATATCATTCTCTCATTTGATGNCATAGNTATAGCCAATGACGGANCAGTTC
____________________________________________________________
consensus GAAAAGATGATATCATTCTCTCATTTGATGGCATAGCTATAGCCAATGACGGAACAGTTC
. : . : . : . : . : . :
rJMSF032I08+ ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
rJMFF010E08+ ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTNTATGAAGAAACCTAATG
rJMFF022C23+ ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
rJMFF004A03+ ATTTTCGAACCAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
____________________________________________________________
consensus ATTTTCGAAACAGAGAGCGAATAACATTTGATCACTTGGTTTCTATGAAGAAACCTAATG
. : . : . : . : . : . :
rJMSF032I08+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
rJMFF010E08+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
rJMFF022C23+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
rJMFF004A03+ AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCANGAGTTTAGCATCAAACTTT
____________________________________________________________
consensus AAACTGCAGTACTCAAAGTACTGAGAAATGGTGAGAAGCATGAGTTTAGCATCAAACTTT
. : . : . : . : . : . :
rJMSF032I08+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF010E08+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF022C23+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF004A03+ TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
rJMFF044N22+ TGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
____________________________________________________________
consensus TTCCACTGAAACCCCTTGTTCCGGTTCATCAATTTGATAAGCTTCCCAGTTTTTTCATTT
. : . : . : . : . : . :
rJMSF049O16+ AGACT
rJMSF032I08+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
rJMFF010E08+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
rJMFF022C23+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
rJMFF004A03+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
JMSF049O16- AGACT
rJMFF044N22+ TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
____________________________________________________________
consensus TTGCTGGTCTTGTCTTCATTCCTTTAACTCAACCATACCTTCATGAGTATGGAGAAGACT
. : . : . : . : . : . :
rJMSF049O16+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTTAGGAAACTTCCAACAAAAC
rJMSF032I08+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
rJMFF010E08+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
rJMFF022C23+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
rJMFF004A03+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
JMSF049O16- GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTTAGGAAACTTCCAACAAAAC
rJMFF044N22+ GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
____________________________________________________________
consensus GGTACAATACCTCACCTCGGCGGTTGTGTGAAAGAGCACTCAGGAAACTTCCAACAAAAC
. : . : . : . : . : . :
rJMSF049O16+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMSF032I08+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF010E08+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF022C23+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF004A03+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
JMSF049O16- CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
rJMFF044N22+ CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
____________________________________________________________
consensus CTGGAGAACAACTTGTTATTCTTTCTCAGGTCTTGTTAGATGATATTAATACTGGGTATG
. : . : . : . : . : . :
rJMSF049O16+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMSF032I08+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF010E08+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF022C23+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF004A03+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
JMSF049O16- AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
rJMFF044N22+ AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
____________________________________________________________
consensus AGCGTCTTGCAGAATTGCAGGTCAATAAGGTTAATGGTGTTGAAGTTGAGAATTTGAAAC
. : . : . : . : . : . :
rJMSF049O16+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMSF032I08+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF010E08+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF022C23+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF004A03+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
JMSF049O16- ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
rJMFF044N22+ ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
____________________________________________________________
consensus ACTTACGCAAGCTTGTGGAGGATAATAGCAAAGAGAGAATAAGGTTCGATCTGGATGATG
. : . : . : . : . : . :
rJMSF049O16+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMSF032I08+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF010E08+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF022C23+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF004A03+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
JMSF049O16- AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
rJMFF044N22+ AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
____________________________________________________________
consensus AGAGGGTGATTGTTTTGAACTACGATTTGGCAAAAGTAGCCACTTCCCGTATACTAAAAC
. : . : . : . : . : . :
rJMSF049O16+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMSF032I08+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF010E08+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF022C23+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF004A03+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
JMSF049O16- GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
rJMFF044N22+ GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
____________________________________________________________
consensus GCCATAGAATACCTTATGCTATGTCTAGTGATCTTATCAATGATGAATGTGCACCTGCAC
. : . : . : . : . : . :
rJMSF049O16+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMSF032I08+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF010E08+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF022C23+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF004A03+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
JMSF049O16- TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
rJMFF044N22+ TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
____________________________________________________________
consensus TTGAGTTGGCTTGCTCAAACTGATTTTTCTTCAAACTTCTATTCTTTCTTACTGAAATTT
. : . : . : . : . : . :
rJMSF049O16+ TGTATTTAAAAA
rJMSF032I08+ TGTATTTAAAAA
rJMFF010E08+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAA
rJMFF022C23+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAAT
rJMFF004A03+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAAT
JMSF049O16- TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAATCTCTATGCA
rJMFF044N22+ TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAATCTCTATGCATTG
____________________________________________________________
consensus TGTATTTTAAAAACTCACCATTTCAGTTATTAAATCTTAGAATATAATCTCTATGCATTG
. : . : . : . : . : . :
rJMFF044N22+ GCTGAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus GCTGAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG