Contig 011167:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF041P18-                ATTAACTTTTATAGATTATATATATTAAATAGGATTTCAAAATTAATCTAATCA
                      ____________________________________________________________
consensus                   ATTAACTTTTATAGATTATATATATTAAATAGGATTTCAAAATTAATCTAATCA
 
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rJMFF041P18-          ACATTCAACACCGCCGCAAAAACAACGTTTGTCTCCCTACAACTGCTTCCACTAGATTCT
                      ____________________________________________________________
consensus             ACATTCAACACCGCCGCAAAAACAACGTTTGTCTCCCTACAACTGCTTCCACTAGATTCT
 
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rJMFF041P18-          CTCCCCTCTCTCGCTTATCTCTCACGCTCTATCTCACTCTCTCCTCCACTTCCTCACTCC
                      ____________________________________________________________
consensus             CTCCCCTCTCTCGCTTATCTCTCACGCTCTATCTCACTCTCTCCTCCACTTCCTCACTCC
 
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rJMFF041P18-          TTCCATGGCTGAGCTACAGCCGTCGGACGTCCCCGTGGCCGCCGCTCCACCGCCCTCCGC
JMFF044B04-            TCCATGGCTGAGCTACAGCCGTCGGACGTCCCCGTGGCCGCCGCTCCACCGCCCTCCGC
                      ____________________________________________________________
consensus             TTCCATGGCTGAGCTACAGCCGTCGGACGTCCCCGTGGCCGCCGCTCCACCGCCCTCCGC
 
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rJMFF041P18-          CGTGGCCGCCGCCGCGTCCACAGCGCCGGCTCCCCCTCCAGCCGAAGCAGCCGCCGCCGC
JMFF044B04-           CGTGGCCGCCGCCGCGTCCACAGCGCCGGCTCCCCCTCCAGCCGAAGCAGCCGCCGCCGC
                      ____________________________________________________________
consensus             CGTGGCCGCCGCCGCGTCCACAGCGCCGGCTCCCCCTCCAGCCGAAGCAGCCGCCGCCGC
 
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rJMFF041P18-          CACGAACAGCGGCGCGGCGGCCAACAGTTTGGGGCAAGGGCTGGCTCCGAAGCGGCAGCG
JMFF044B04-           CACGAACAGCGGCGCGGCGGCCAACAGTTTGGGGCAAGGGCTGGCTCCGAAGCGGCAGCG
                      ____________________________________________________________
consensus             CACGAACAGCGGCGCGGCGGCCAACAGTTTGGGGCAAGGGCTGGCTCCGAAGCGGCAGCG
 
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rJMFF041P18-          GCGGCCCAGCGTGAGATTGGGCGAGATCGGGGAGTCCCCTTACGACGCGCAGCCGCGGCG
JMFF044B04-           GCGGCCCAGCGTGAGATTGGGCGAGATCGGGGAGTCCCCTTACGACGCGCAGCCGCGGCG
                      ____________________________________________________________
consensus             GCGGCCCAGCGTGAGATTGGGCGAGATCGGGGAGTCCCCTTACGACGCGCAGCCGCGGCG
 
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rJMFF041P18-          GGGGCCGAAGACGTGGCGCTTCCACAAGGACCCGTCTCTGGCAGCTAAGACCTCCAAGAT
JMFF044B04-           GGGGCCGAAGACGTGGCGCTTCCACAAGGACCCGTCTCTGGCAGCTAAGACCTCCAAGAT
JMFF041P18+                                   CAAGGACCCGTCTCTGGCAGCTAAGACCTCCAAGAT
                      ____________________________________________________________
consensus             GGGGCCGAAGACGTGGCGCTTCCACAAGGACCCGTCTCTGGCAGCTAAGACCTCCAAGAT
 
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rJMFF041P18-          CCGACCCTTAACCAACCTCGTAAACGGCGCCCCCTCGGCCGGGGATAATTACGACGAGGC
JMFF044B04-           CCGACCCTTAACCAACCTCGTAAACGGCGCCCCCTCGGCCGGGGATAATTACGACGAGGC
JMFF041P18+           CCGACCCTTAACCAACCTCGTAAACGGCGCCCCCTCGGCCGGGGATAATTACGACGAGGC
                      ____________________________________________________________
consensus             CCGACCCTTAACCAACCTCGTAAACGGCGCCCCCTCGGCCGGGGATAATTACGACGAGGC
 
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rJMFF041P18-          CAACGTGAACGAGGAGAACAATTTCGGGTTCGATTTGGGGAATCGGAAGCCCAAGATGAA
JMFF044B04-           CAACGTGAACGAGGAGAACAATTTCGGGTTCGATTTGGGGAATCGGAAGCCCAAGATGAA
JMFF041P18+           CAACGTGAACGAGGAGAACAATTTCGGGTTCGATTTGGGGAATCGGAAGCCCAAGATGAA
                      ____________________________________________________________
consensus             CAACGTGAACGAGGAGAACAATTTCGGGTTCGATTTGGGGAATCGGAAGCCCAAGATGAA
 
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rJMFF041P18-          GCAGCAGC                                                    
JMFF044B04-           GCAGCAGCGGCCCACCAAGCGGGCGCGCACCAATTGGACCGCGTCGTCCTCCAAATTCGA
JMFF041P18+           GCAGCAGCGGCCCACCAAGCGGGCGCGCACCAATTGGACCGCGTCGTCCTCCAAATTCGA
                      ____________________________________________________________
consensus             GCAGCAGCGGCCCACCAAGCGGGCGCGCACCAATTGGACCGCGTCGTCCTCCAAATTCGA
 
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JMFF044B04-           CGCCGTGAACGGCGGAATTGAAGGCGAGAGCTTCTTCCGCGAGGAGAAAGACAACGAAGA
JMFF041P18+           CGCCGTGAACGGCGGAATTGAAGGCGAGAGCTTCTTCCGCGAGGAGAAAGACAACGAAGA
                      ____________________________________________________________
consensus             CGCCGTGAACGGCGGAATTGAAGGCGAGAGCTTCTTCCGCGAGGAGAAAGACAACGAAGA
 
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JMFF044B04-           GTTCCGCGATTTCGAGCCCGAGGGCTCCGAGAGCCCATTGAAAGAGCAGAGCCCGGTTAA
JMFF041P18+           GTTCCGCGATTTCGAGCCCGAGGGCTCCGAGAGCCCATTGAAAGAGCAGAGCCCGGTTAA
                      ____________________________________________________________
consensus             GTTCCGCGATTTCGAGCCCGAGGGCTCCGAGAGCCCATTGAAAGAGCAGAGCCCGGTTAA
 
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JMFF044B04-           TTCCATGGAAAACCTAGGCCTCCAGTATTGGGACCGCCGGG                   
JMFF041P18+           TTCCATGGAAAACCTAGGCCTCCAGTATTGGGACCGCCGGGCCAATAGGGCACACCTTTC
rJMFF044B04+                                              CCGGGCCAATAGGGCACACCTTTC
                      ____________________________________________________________
consensus             TTCCATGGAAAACCTAGGCCTCCAGTATTGGGACCGCCGGGCCAATAGGGCACACCTTTC
 
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JMFF041P18+           GGAAAGCCGAGATAACGATAATCTCAACAACGGAGGAATTCACACCGAAATGAATTCCCA
rJMFF044B04+          GGAAAGCCGAGATAACGATAATCTCAACAACGGAGGAATTCACACCGAAATGAATTCCCA
                      ____________________________________________________________
consensus             GGAAAGCCGAGATAACGATAATCTCAACAACGGAGGAATTCACACCGAAATGAATTCCCA
 
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JMFF041P18+           GGACCGGAGTTCCGGCGTGAGGGACTGGTTAATCGGCCTCGGCCTCGGCCGGTACTCCCC
rJMFF044B04+          GGACCGGAGTTCCGGCGTGAGGGACTGGTTAATCGGCCTCGGCCTCGGCCGGTACTCCCC
                      ____________________________________________________________
consensus             GGACCGGAGTTCCGGCGTGAGGGACTGGTTAATCGGCCTCGGCCTCGGCCGGTACTCCCC
 
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JMFF041P18+           CGTTTTCGAGATACACGAGGTAGATGACGAGGTTTTGCCGATGTTAACGTTGGAAGATCT
rJMFF044B04+          CGTTTTCGAGATACACGAGGTAGATGACGAGGTTTTGCCGATGTTAACGTTGGAAGATCT
                      ____________________________________________________________
consensus             CGTTTTCGAGATACACGAGGTAGATGACGAGGTTTTGCCGATGTTAACGTTGGAAGATCT
 
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JMFF041P18+           CAAGGACATGGGGATTAACGCCGTCGGCTCCCGCCGGAAAATGTACACTGCCATCCTGAA
rJMFF044B04+          CAAGGACATGGGGATTAACGCCGTCGGCTCCCGCCGGAAAATGTACACTGCCATCCTGAA
                      ____________________________________________________________
consensus             CAAGGACATGGGGATTAACGCCGTCGGCTCCCGCCGGAAAATGTACACTGCCATCCTGAA
 
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JMFF041P18+           GCTCC                                                       
rJMFF044B04+          GCTCCGGAAAGGATTTTCGTGAGTCCCAGAACTAGATATATATATAAATATGCAGTTAAC
                      ____________________________________________________________
consensus             GCTCCGGAAAGGATTTTCGTGAGTCCCAGAACTAGATATATATATAAATATGCAGTTAAC
 
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rJMFF044B04+          TCTAATGGGTTTTCTCTTTTTTTTTTTTTTGTTCATCTGTTTTCTGCCTTCTTTTTTCCT
                      ____________________________________________________________
consensus             TCTAATGGGTTTTCTCTTTTTTTTTTTTTTGTTCATCTGTTTTCTGCCTTCTTTTTTCCT
 
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rJMFF044B04+          ATATTATTAACCTGAATAATGGTATAAATGCTACCTAGTTTTGGAGTTAGATTTCTTTCC
                      ____________________________________________________________
consensus             ATATTATTAACCTGAATAATGGTATAAATGCTACCTAGTTTTGGAGTTAGATTTCTTTCC
 
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rJMFF044B04+          TCGTTTTCTCATGTTTGGATATGTTTAGCTATTGTGAATATGTAATCCTTGATACACATG
                      ____________________________________________________________
consensus             TCGTTTTCTCATGTTTGGATATGTTTAGCTATTGTGAATATGTAATCCTTGATACACATG
 
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rJMFF044B04+          AAAGTGACAAGAAAAAAGGAAAGGTGATTTAGTAATGTACCATTCTCGTGATGCCAATCT
                      ____________________________________________________________
consensus             AAAGTGACAAGAAAAAAGGAAAGGTGATTTAGTAATGTACCATTCTCGTGATGCCAATCT
 
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rJMFF044B04+          TTCAAATGAAGTTTAGACATGAACTTATCATAGTCTAAAAAAAAAAAAAAAACTCTCCAG
                      ____________________________________________________________
consensus             TTCAAATGAAGTTTAGACATGAACTTATCATAGTCTAAAAAAAAAAAAAAAACTCTCCAG