Contig 011166:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043O17Sequence642003267 (2)ref|XP_011085845.1|1e-50PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]657011166 (2)ref|XP_009592532.1|3e-69PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]
JMFF047J15Sequence641003267 (2)ref|XP_011085845.1|1e-50PREDICTED: probable inactive receptor kinase At1g48480 [Sesamum indicum]534011166 (2)ref|XP_009592532.1|6e-52PREDICTED: probable inactive receptor kinase RLK902 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF043O17+             CCGAGGTAACAGACCCTCGTAAAGTGTCCCAGAAAGCGGATGTTTACAGTTTTGGCG
                      ____________________________________________________________
consensus                CCGAGGTAACAGACCCTCGTAAAGTGTCCCAGAAAGCGGATGTTTACAGTTTTGGCG
 
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rJMFF047J15+                                    AAGGCTCCTACTCATTCGTTGACGAATGAGGAAG
rJMFF043O17+          TGTTACTCCTCGAGCTGCTTACTGGGAAGGCTCCTACTCATTCGTTGACGAATGAGGAAG
                      ____________________________________________________________
consensus             TGTTACTCCTCGAGCTGCTTACTGGGAAGGCTCCTACTCATTCGTTGACGAATGAGGAAG
 
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rJMFF047J15+          GCGTTGATCTGCCCCGATGGGTGCAGTCTATAGTCCGAGAGGAGTGGAGCGCTGAGGTGT
rJMFF043O17+          GCGTTGATCTGCCCCGATGGGTGCAGTCTATAGTCCGAGAGGAGTGGAGCGCTGAGGTGT
                      ____________________________________________________________
consensus             GCGTTGATCTGCCCCGATGGGTGCAGTCTATAGTCCGAGAGGAGTGGAGCGCTGAGGTGT
 
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rJMFF047J15+          TTGATCTCGAGCTTCTTAGGTACCAAAACGTCGAGGAGGACATGGTTCAGCTCCTGCAGC
rJMFF043O17+          TTGATCTCGAGCTTCTTAGGTACCAAAACGTCGAGGAGGACATGGTTCAGCTCCTGCAGC
                      ____________________________________________________________
consensus             TTGATCTCGAGCTTCTTAGGTACCAAAACGTCGAGGAGGACATGGTTCAGCTCCTGCAGC
 
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rJMFF047J15+          TCGCGGTTGATTGCACCGCTCAGTACCCCGACCAGCGCCCTTCGATGGCCGAGGTTACTA
rJMFF043O17+          TCGCGGTTGATTGCACCGCTCAGTACCCCGACCAGCGCCCTTCGATGGCCGAGGTTACTA
                      ____________________________________________________________
consensus             TCGCGGTTGATTGCACCGCTCAGTACCCCGACCAGCGCCCTTCGATGGCCGAGGTTACTA
 
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rJMFF047J15+          GCCAAATCGAAGAGCTTTGTCGTTCTAGCTTCCAGGACTCTCATGGCGATATAATCGACG
rJMFF043O17+          GCCAAATCGAAGAGCTTTGTCGTTCTAGCTTCCAGGACTCTCATGGCGATATAATCGACG
                      ____________________________________________________________
consensus             GCCAAATCGAAGAGCTTTGTCGTTCTAGCTTCCAGGACTCTCATGGCGATATAATCGACG
 
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rJMFF047J15+          ACATAGAACAACAACCATCTGCATAATCTCAGTTGCTGCTGGAAGAAACAAAACATCCTA
rJMFF043O17+          ACATAGAACAACAACCATCTGCATAATCTCAGTTGCTGCTGGAAGAAACAAAACATCCTA
                      ____________________________________________________________
consensus             ACATAGAACAACAACCATCTGCATAATCTCAGTTGCTGCTGGAAGAAACAAAACATCCTA
 
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rJMFF047J15+          TTCCTCACATTTCCTTTTTTTTTTTTTTTTGTTCAATTCTTGATTTGGTGTTTTAGGTGT
rJMFF043O17+          TTCCTCACATTTCCTTTTTTTTTTTTTTTTGTTCAATTCTTGATTTGGTGTTTTAGGTGT
                      ____________________________________________________________
consensus             TTCCTCACATTTCCTTTTTTTTTTTTTTTTGTTCAATTCTTGATTTGGTGTTTTAGGTGT
 
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rJMFF047J15+          TTTTCTTAGAGGAGGGTGGGGATTCTGATATTATTCTTTTTTTCTTTTTCTTAAATTGTG
rJMFF043O17+          TTTTCTTAGAGGAGGGTGGGGATTCTGATATTATTCTTTTTTTCTTTTTCTTAAATTGTG
                      ____________________________________________________________
consensus             TTTTCTTAGAGGAGGGTGGGGATTCTGATATTATTCTTTTTTTCTTTTTCTTAAATTGTG
 
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rJMFF047J15+          TGAACTGTACAATAACTGTCAATTGTTTCTTTCTTGAATCTCTAGGTTTTTTGCTTCTTA
rJMFF043O17+          TGAACTGTACAATAACTGTCAATTGTTTCTTTCTTGAATCTCTAGGTTTTTTGCTTCTTA
                      ____________________________________________________________
consensus             TGAACTGTACAATAACTGTCAATTGTTTCTTTCTTGAATCTCTAGGTTTTTTGCTTCTTA
 
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rJMFF047J15+          ATACAAGATTGTTTCTGACG                                        
rJMFF043O17+          ATACAAGATTGTTTCTGACGAAAAAAAAAAAAAAAACTTCCAGGTTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             ATACAAGATTGTTTCTGACGAAAAAAAAAAAAAAAACTTCCAGGTTGATCCGCCATAAGG