Contig 011158:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001O06Sequence659011158 (10)ref|XP_010246798.1|2e-68PREDICTED: probable arabinose 5-phosphate isomerase [Nelumbo nucifera]
JMFF010G23Sequence401011158 (10)ref|XP_009625155.1|4e-56PREDICTED: probable arabinose 5-phosphate isomerase [Nicotiana tomentosiformis]580011158 (10)ref|XP_004235377.1|4e-76PREDICTED: probable arabinose 5-phosphate isomerase [Solanum lycopersicum]
JMFF025A06Sequence668011158 (10)ref|XP_010246798.1|7e-70PREDICTED: probable arabinose 5-phosphate isomerase [Nelumbo nucifera]
JMFF042M10Sequence659011158 (10)ref|XP_004235377.1|1e-90PREDICTED: probable arabinose 5-phosphate isomerase [Solanum lycopersicum]511011158 (10)ref|XP_009625155.1|1e-23PREDICTED: probable arabinose 5-phosphate isomerase [Nicotiana tomentosiformis]
JMSF002J10Sequence441011158 (10)ref|XP_009625155.1|3e-24PREDICTED: probable arabinose 5-phosphate isomerase [Nicotiana tomentosiformis]755011158 (10)ref|XP_004235377.1|5e-95PREDICTED: probable arabinose 5-phosphate isomerase [Solanum lycopersicum]
JMSF002M07Sequence236011158 (10)ref|XP_009625155.1|2e-25PREDICTED: probable arabinose 5-phosphate isomerase [Nicotiana tomentosiformis]746011158 (10)ref|XP_004235377.1|2e-93PREDICTED: probable arabinose 5-phosphate isomerase [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF002J10-                                        GGATTTGAGTTTTATCGCCGCTCACCATTAA
                      ____________________________________________________________
consensus                                          GGATTTGAGTTTTATCGCCGCTCACCATTAA
 
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JMSF002J10-           TGGCGAGCAAATATCAATAAAAAATAATTGTTTTTGTGCGTTTAGGTAATGTTTACCACC
                      ____________________________________________________________
consensus             TGGCGAGCAAATATCAATAAAAAATAATTGTTTTTGTGCGTTTAGGTAATGTTTACCACC
 
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JMSF002J10-           CAAGTATCTAGTCTAGCAATATCCACGGAAGAATTTCCAGAAAATGAATGATACTGTACC
                      ____________________________________________________________
consensus             CAAGTATCTAGTCTAGCAATATCCACGGAAGAATTTCCAGAAAATGAATGATACTGTACC
 
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JMSF002M07-                                                                     GA
JMSF002J10-           GTACAACAAGAGGAGTTGATGATCTATATAAAGAGTGTGAAACAAACGAAAATCAAGAGA
JMFF010G23-                                                                     GA
JMFF042M10-                                                                     GA
                      ____________________________________________________________
consensus             GTACAACAAGAGGAGTTGATGATCTATATAAAGAGTGTGAAACAAACGAAAATCAAGAGA
 
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JMSF002M07-           AAAGAAGCCGAGAAAAATGGGGTCTCTTCCACCGCCATCGCTGGAGAAGCAAGAAGGGTC
JMSF002J10-           AAAGAAGCCGAGAAAAATGGGGTCTCTTCCACCGCCATCGCTGGAGAAGCAAGAAGGGTC
JMFF010G23-           AAAGAAGCCGAGAAAAATGGGGTCTCTTCCACCGCCATCGCTGGAGAAGCAAGAAGGGTC
JMFF042M10-           AAAGAAGCCGAGAAAAATGGGGTCTCTTCCACCGCCATCGCTGGAGAAGCAAGAAGGGTC
                      ____________________________________________________________
consensus             AAAGAAGCCGAGAAAAATGGGGTCTCTTCCACCGCCATCGCTGGAGAAGCAAGAAGGGTC
 
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JMSF002M07-           CGCGGATATTGACCCGACCCATTTGCTGAGCCTCTTCAAGGCACAGCAGAAGTACATCAA
JMSF002J10-           CGCGGATATTGACCCGACCCATTTGCTGAGCCTCTTCAAGGCACAGCAGAAGTACATCAA
JMFF010G23-           CGCGGATATTGACCCGACCCATTTGCTGAGCCTCTTCAAGGCACAGCAGAAGTACATCAA
JMFF042M10-           CGCGGATATTGACCCGACCCATTTGCTGAGCCTCTTCAAGGCACAGCAGAAGTACATCAA
                      ____________________________________________________________
consensus             CGCGGATATTGACCCGACCCATTTGCTGAGCCTCTTCAAGGCACAGCAGAAGTACATCAA
 
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JMSF002M07-           CCATTTCTTCCAGAACCTCGATCTCTCCCAGACCCTCACCTTCGCGCAGGCCCTCCTCAA
JMSF002J10-           CCATTTCTTCCAGAACCTCGATCTCTCCCAGACCCTCACCTTCGCGCAGGCCCTCCTCAA
JMFF010G23-           CCATTTCTTCCAGAACCTCGATCTCTCCCAGACCCTCACCTTCGCGCAGGCCCTCCTCAA
JMFF042M10-           CCATTTCTTCCAGAACCTCGATCTCTCCCAGACCCTCACCTTCGCGCAGGCCCTCCTCAA
                      ____________________________________________________________
consensus             CCATTTCTTCCAGAACCTCGATCTCTCCCAGACCCTCACCTTCGCGCAGGCCCTCCTCAA
 
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JMSF002M07-           TGCTCAGGGCACCATCTTCTTCACCGGCGTCGGAAAGTCCGGCTTCGTC           
JMSF002J10-           TGCTCAGGGCACCATCTTCTTCACCGGCGTCGGAAAGTCCGGCTTCGTC           
JMFF010G23-           TGCTCAGGGCACCATCTTCTTCACCGGCGTCGGAAAGTCCGGCTTCGTCGCCCAGAAGAT
JMFF042M10-           TGCTCAGGGCACCATCTTCTTCACCGGCGTCGGAAAGTCCGGCTTCGTCGCCCAGAAGAT
                      ____________________________________________________________
consensus             TGCTCAGGGCACCATCTTCTTCACCGGCGTCGGAAAGTCCGGCTTCGTCGCCCAGAAGAT
 
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JMFF010G23-           CTCCCAGACGCTCGTCTCTCTGGGGATCAAGTCCGGCTTCCTCTCCCCTCTCGACGCGCT
JMFF042M10-           CTCCCAGACGCTCGTCTCTCTGGGGATCAAGTCCGGCTTCCTCTCCCCTCTCGACGCGCT
                      ____________________________________________________________
consensus             CTCCCAGACGCTCGTCTCTCTGGGGATCAAGTCCGGCTTCCTCTCCCCTCTCGACGCGCT
 
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JMFF010G23-           CCACGGCGACATCGGCATTCTGGCGCCCCGGGATCTGCTCGTCATGTTCAGCAAGAGCGG
JMFF042M10-           CCACGGCGACATCGGCATTCTGGCGCCCCGGGATCTGCTCGTCATGTTCAGCAAGAGCGG
                      ____________________________________________________________
consensus             CCACGGCGACATCGGCATTCTGGCGCCCCGGGATCTGCTCGTCATGTTCAGCAAGAGCGG
 
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JMFF010G23-           CAACACCGACNGAGCTCNTGCGCCTCGTGCCCTGC                         
JMFF042M10-           CAACACCGAC-GAGCTCATGCGCCTCGTGCCCTGCGCCAAGGCGAAGGGGGTGTTTCTGA
                      ____________________________________________________________
consensus             CAACACCGACNGAGCTCATGCGCCTCGTGCCCTGCGCCAAGGCGAAGGGGGTGTTTCTGA
 
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JMFF042M10-           TCTCCGTCACCTCTGTCACCCCCAATTCCTTGGCCGCCGTTTGCGATCTGAACGTGCATT
                      ____________________________________________________________
consensus             TCTCCGTCACCTCTGTCACCCCCAATTCCTTGGCCGCCGTTTGCGATCTGAACGTGCATT
 
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JMFF042M10-           TGCCTCTCAGAGAGAATTGTGCCCCTTCGATTTGGCCCCCGTCACCTCCACCGCTATCCA
rJMSF002M07+                                                        TCCACCGCTATCCA
rJMSF002J10+                                                CCGTCACCTCCACCGCTATCCA
                      ____________________________________________________________
consensus             TGCCTCTCAGAGAGAATTGTGCCCCTTCGATTTGGCCCCCGTCACCTCCACCGCTATCCA
 
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JMFF042M10-           GATGGTGTTCGGAGATACGGTGGCGATTGCGTTGATGGCCGCCAAGAATTTGAGCCGCGA
rJMSF002M07+          GATGGTGTTCGGAGATACGGTGGCGATTGCGTTGATGGCCGCCAAGAATTTGAGCCGCGA
rJMFF010G23+                                              GGCCGCCAAGAATTTGAGCCGCGA
rJMSF002J10+          GATGGTGTTCGGAGATACGGTGGCGATTGCGTTGATGGCCGCCAAGAATTTGAGCCGCGA
                      ____________________________________________________________
consensus             GATGGTGTTCGGAGATACGGTGGCGATTGCGTTGATGGCCGCCAAGAATTTGAGCCGCGA
 
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JMFF042M10-           CGAGTACGCCTCTAACCACCCCTCCGGCAGGATTGGNCAGAGCTTGATCTTCAA      
rJMSF002M07+          CGAGTACGCCTCTAACCACCCCTCCGGCAGGATTGGCAAGAGCTTGGTCTTCAAGGTGAA
rJMFF010G23+          CGAGTACGCCTNTAACCACCCCTCCGTCAGGATTGGCNAGAGCTTGATCTTCAAGGTGAA
rJMSF002J10+          CGAGTACGCCTCTAACCACCCCTCCGGCAGGATTGGCAAGAGCTTGATCTTCAAGGTGAA
rJMFF001O06+                                           TGGCAAGAGCTTGATCTTCAAGGTGAA
rJMFF025A06+                                     CAGGATTGGCAAGAGCTTGATCTTCAAGGTGAA
                      ____________________________________________________________
consensus             CGAGTACGCCTCTAACCACCCCTCCGGCAGGATTGGCAAGAGCTTGATCTTCAAGGTGAA
 
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rJMSF002M07+          AGATGTAATGAAGAAGAAAGAAGAACTTCCAATTTGCAATGAAGGAGATCTCATTATGGA
rJMFF010G23+          AGATGTAATGAAGAAGAAAGAAGAACTTCCAATTTNCAATGAAGGAGATNTCATTATGGA
rJMSF002J10+          AGATGTAATGAAGAAGAAAGAAGAACTTCCAATTTGCAATGAAGGAGATCTCATTATGGA
rJMFF001O06+          AGATGTAATGAAGAAGAAAGAAGAACTTCCAATTTGCAATGAAGGAGATCTCATTATGGA
rJMFF025A06+          AGATGTAATGAAGAAGAAAGAAGAACTTCCAATTTGCAATGAAGGAGATCTCATTATGGA
                      ____________________________________________________________
consensus             AGATGTAATGAAGAAGAAAGAAGAACTTCCAATTTGCAATGAAGGAGATCTCATTATGGA
 
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rJMSF002M07+          CCAGTTAGTAGAACTAACGAGCAAAGGATGTGGATGCCTCCTCGTTATTGATCACGATTA
rJMFF010G23+          CCAGTTAGTAGAACTAACGAGCAAAGGATGTGGATGCCTCNTCGTTATTGATCACGANTA
rJMSF002J10+          CCAGTTAGTAGAACTAACGAGCAAAGGATGTGGATGCCTCCTCGTTATTGATCACGATTA
rJMFF001O06+          CCAGTTAGTAGAACTAACGAGCAAAGGATGTGGATGCCTCCTCGTTATTGATCACGATTA
rJMFF025A06+          CCAGTTAGTAGAACTAACGAGCAAAGGATGTGGATGCCTCCTCGTTATTGATCACGATTA
                      ____________________________________________________________
consensus             CCAGTTAGTAGAACTAACGAGCAAAGGATGTGGATGCCTCCTCGTTATTGATCACGATTA
 
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rJMSF002M07+          TCATCTGCTGGGCACATTTACTGATGGTGACTTGCGGCGCACATTGAAATCTAGCGGCGA
rJMFF010G23+          TCATCTGCTGGGCACATTTACTGATGGTGACTTGCGGCGCACATTGAAATCTAGCGGCGA
rJMSF002J10+          TCATCTGCTGGGCACATTTACTGATGGTGACTTGCGGCGCACATTGAAATCTAGCGGCGA
rJMFF001O06+          TCATCTGCTGGGCACATTTACTGATGGTGACTTGCGGCGCACATTGAAATCTAGCGGCGA
rJMFF025A06+          TCATCTGCTGGGCACATTTACTGATGGTGACTTGCGGCGCACATTGAAATCTAGCGGCGA
rJMFF042M10+                                             GGCGCCCATTGAAATCTAGCGGCGA
                      ____________________________________________________________
consensus             TCATCTGCTGGGCACATTTACTGATGGTGACTTGCGGCGCACATTGAAATCTAGCGGCGA
 
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rJMSF002M07+          AAGGATCTTCACGCTCACAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
rJMFF010G23+          AAGGATCTTCACGCTCACAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
rJMSF002J10+          AAGGATCTTCACGCTCACAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
rJMFF001O06+          AAGGATCTTCACGCTCACAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
rJMFF025A06+          AAGGATCTTCACGCTCACAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
rJMFF042M10+          AAGGATCTTCACGCTCCCAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
                      ____________________________________________________________
consensus             AAGGATCTTCACGCTCACAGTAGGCGAGATGTGTAACAGAAAACCGAGAACAATTTGCCC
 
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rJMSF002M07+          TGATGCAATGGCAGTTGAAGCAATGCAGAAGATGGAGTCCCCGCCATCCCCTGTTCAGTT
rJMFF010G23+          TGATGCAATGGCAGTTGAAGCAATGCAGAAGATGGAGTCCCCNCCATCCCCTGTTCAGTT
rJMSF002J10+          TGATGCAATGGCAGTTGAAGCAATGCAGAAGATGGAGTCCCCGCCATCCCCTGTTCAGTT
rJMFF001O06+          TGATGCAATGGCAGTTGAAGCAATGCAGAAGATGGAGTCCCCGCCATCCCCTGTTCAGTT
rJMFF025A06+          TGATGCAATGGCAGTTGAAGCAATGCAGAAGATGGAGTCCCCGCCATCCCCTGTTCAGTT
rJMFF042M10+          TGATGCAATGGCAGTTGAAGCAATGCAGAAAATGGAGTCCCCGCCATCCCCTGTTCAGTT
                      ____________________________________________________________
consensus             TGATGCAATGGCAGTTGAAGCAATGCAGAAGATGGAGTCCCCGCCATCCCCTGTTCAGTT
 
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rJMSF002M07+          CTTGCCAGTCATCAACGATGACAACGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
rJMFF010G23+          CTTGCCAGTCATCAACGATGACAANGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
rJMSF002J10+          CTTGCCAGTCATCAACGATGACAACGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
rJMFF001O06+          CTTGCCAGTCATCAACGATGACAACGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
rJMFF025A06+          CTTGCCAGTCATCAACGATGACAACGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
rJMFF042M10+          TTTGCCAGTCATCAACGATGACAACGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
                      ____________________________________________________________
consensus             CTTGCCAGTCATCAACGATGACAACGTCGTGATTGGTATTGTGACTTTACACGGGCTCGT
 
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rJMSF002M07+          TTCGGCTGGCTTGTGAGTTGTGGTGATTCCCCTACTTCTTTCTGTCATTAGTTCAATGGT
rJMFF010G23+          TTCGGCTGGCTTNTGAGTTGTGGTGATTCCCCTANTTCTTTCTGTCATTAGTTCAATGGT
rJMSF002J10+          TTCGGCTGGCTTGTGAGTTGTGGTGATTCCCCTACTTCTTTCTGTCATTAGTTCAATGGT
rJMFF001O06+          TTCGGCTGGCTTGTGAGTTGTGGTGATTCCCCTACTTCTTTCTGTCATTAGTTCAATGGT
rJMFF025A06+          TTCGGCTGGCTTGTGAGTTGTGGTGATTCCCCTACTTCTTTCTGTCATTAGTTCAATGGT
rJMFF042M10+          TTCGGCTGGCTTGTGAGTTGTGGTGATTCCCCCACTTCTTTCTGTCATTAGTTCAATGGT
                      ____________________________________________________________
consensus             TTCGGCTGGCTTGTGAGTTGTGGTGATTCCCCTACTTCTTTCTGTCATTAGTTCAATGGT
 
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rJMSF002M07+          TATGACGATACGCATTGTATATTGTTCATTTACTGTGTTTAAATGGTGTGCGCGAGGAGA
rJMFF010G23+          TATGACGATACGCATTGTATATTGTTCATTTACTGTGTTTAAATGGNGTGCGCGAGGAGA
rJMSF002J10+          TATGACGATACGCATTGTATATTGTTCATTTACTGTGTTTAAATGGTGTGCGCGAGGAGA
rJMFF001O06+          TATGACGATACGCATTGTATATTGTTCATTTACTGTGTTTAAATGGTGTGCGCGAGGAGA
rJMFF025A06+          TATGACGATACACATTGTATATTGTTCATTTACTGTGTTTAAATGGTGTGCGCGAGGAGA
rJMFF042M10+          TATGACGATACGCCTTGTATATTGTTCATTTACTGGGTTTAAATGGGGGGCGCGAGGAGA
                      ____________________________________________________________
consensus             TATGACGATACGCATTGTATATTGTTCATTTACTGTGTTTAAATGGTGTGCGCGAGGAGA
 
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rJMSF002M07+          ATTCTATTCTATTCTTGTAATTGTTATTGGATTACACTATTGTTGTAGTGAAGAATGAGA
rJMFF010G23+          ATTCTATTC                                                   
rJMSF002J10+          ATTCTATTCTATTCTTGTAATTGTTATTGGATTACACTATTGTTGTAGTGAAGAATGAGA
rJMFF001O06+          ATTCTATTCTATTCTTGTAATTGTTATTGGATTACACTATTGTTGTAGTGAAGAATGAGA
rJMFF025A06+          ATTCTATTCTATTCTTGTAATTGTTATTGGATTACACTATTGTTGTAGTGAAGAATGAGA
rJMFF042M10+          ATTCTATTCTATTCTTGTAATTGTTATTGGATTACCCTATTGTTGTAGTGAAGAATGAAA
                      ____________________________________________________________
consensus             ATTCTATTCTATTCTTGTAATTGTTATTGGATTACACTATTGTTGTAGTGAAGAATGAGA
 
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rJMSF002M07+          AGTTTAATAGTTGTGATCTGTTAGTTGCCAGTCTCTTATAGATGGGACTGTGTAGCTTAG
rJMSF002J10+          AGTTTAATAGTTGTGATCTGTTAGTTGCCAGTCTCTTATAGATGGGACTGTGTAGCTTAG
rJMFF001O06+          AGTTTAATAGTTGTGATCTGTTAGTTGCCAGTCTCTTATAGATGGGACTGTGTAGCTTAG
rJMFF025A06+          AGTTTAATAGTTGTGATCTGTTAGTTGCCAGTCTCTTATAGATGGGACTGTGTAGCTTAG
rJMFF042M10+          AGTTTAATAGTTGTGATCTGTTAGTTGCCAGTCTTTTATAAATGGGGCTGGGTAGCTTAG
                      ____________________________________________________________
consensus             AGTTTAATAGTTGTGATCTGTTAGTTGCCAGTCTCTTATAGATGGGACTGTGTAGCTTAG
 
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rJMSF002M07+          ATTTCTAGGATT                                                
rJMSF002J10+          ATTTCTAGGATTA                                               
rJMFF001O06+          ATTTCTAGGATTATTGTAATCAGTGAGAGGCC                            
rJMFF025A06+          ATTTCTAGGATTATTGTAATCAGTGAGAGGCC                            
rJMFF042M10+          ATTTTTAGGATTATTGTAATCAGTGAGAGGCCCCCAATGTTAAGCTTTTTGCTTTCAGTT
                      ____________________________________________________________
consensus             ATTTCTAGGATTATTGTAATCAGTGAGAGGCCCCCAATGTTAAGCTTTTTGCTTTCAGTT