Contig 011150:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042C08Sequence659011150 (4)ref|XP_009793303.1|2e-54PREDICTED: 28 kDa heat- and acid-stable phosphoprotein-like [Nicotiana sylvestr624011150 (4)ref|XP_008367151.1|6e-36PREDICTED: 28 kDa heat- and acid-stable phosphoprotein-like [Malus domestica]
JMFN013I03Sequence568011150 (4)ref|XP_008367151.1|4e-33PREDICTED: 28 kDa heat- and acid-stable phosphoprotein-like [Malus domestica]
JMFN032B09Sequence604011150 (4)ref|XP_009793303.1|1e-54PREDICTED: 28 kDa heat- and acid-stable phosphoprotein-like [Nicotiana sylvestr

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-                                     TCGTCTTCTGAATTTGGCTCTCTCCCTCCTCTTC
JMFF042C08-                                ACTCATCGTCTTCTGAATTTGGCTCTCTCCCTCCTCTTC
                      ____________________________________________________________
consensus                                  ACTCATCGTCTTCTGAATTTGGCTCTCTCCCTCCTCTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           TCTTCTGTAGAAAACCTCTGAAAAAGCGCTATGGGGAGAGGAAAGTTCAAGGGAAAGCCC
JMFF042C08-           TCTTCTGTAGAAAACCTCTGAAAAAGCGCTATGGGGAGAGGAAAGTTCAAGGGAAAGCCC
                      ____________________________________________________________
consensus             TCTTCTGTAGAAAACCTCTGAAAAAGCGCTATGGGGAGAGGAAAGTTCAAGGGAAAGCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           ACTGGTCGCCGCCAGTTCTCCACTCCTGAGGAGATGAAGGCTGGTACCTCAGCGGCTCGT
JMFF042C08-           ACTGGTCGCCGCCAGTTCTCCACTCCTGAGGAGATGAAGGCTGGTACCTCAGCGGCTCGT
                      ____________________________________________________________
consensus             ACTGGTCGCCGCCAGTTCTCCACTCCTGAGGAGATGAAGGCTGGTACCTCAGCGGCTCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           CCTCGCACATTTAGAAAGGAAGAAGCCGAAGTTGAGGAAGAGGAGATATCTGAGAATGAG
JMFF042C08-           CCTCGCACATTTAGAAAGGAAGAAGCCGAAGTTGAGGAAGAGGAGATATCTGAGAATGAG
                      ____________________________________________________________
consensus             CCTCGCACATTTAGAAAGGAAGAAGCCGAAGTTGAGGAAGAGGAGATATCTGAGAATGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           TCTGGAGAGGAATCTGAAGGGTCTGATAAAGACCAGAGGCAAAAGGGTTTACAGGGCATC
JMFF042C08-           TCTGGAGAGGAATCTGAAGGGTCTGATAAAGACCAGAGGCAAAAGGGTTTACAGGGCATC
JMFN013I03+                                                                    ATC
rJMFF042C08+                                                            ACAGGGCATC
                      ____________________________________________________________
consensus             TCTGGAGAGGAATCTGAAGGGTCTGATAAAGACCAGAGGCAAAAGGGTTTACAGGGCATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           ATCGAGATTGAGAATCCTAACTTAGTGAAGGCTAAGAATCTGAAAGCCAAAGACGTGGAT
JMFF042C08-           ATCGAGATTGAGAATCCTAACTTAGTGAAGGCTAAGAATCTGAAAGCCAAAGACGTGGAT
JMFN013I03+           ATCGAGATTGAGAATCCTAACTTAGTGAAGGCTAAGAATCTGAAAGCCAAAGACGTGGAT
rJMFF042C08+          ATCGAGATTGAGAATCCTAACTTAGTGAAGGCTAAGAATCTGAAAGCCAAAGACGTGGAT
                      ____________________________________________________________
consensus             ATCGAGATTGAGAATCCTAACTTAGTGAAGGCTAAGAATCTGAAAGCCAAAGACGTGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           ATGGAGAAAACAACTGAACTTTCAAGACGTGAAAGGGAAGAGATAGAGAAGCAGAAAGCT
JMFF042C08-           ATGGAGAAAACAACTGAACTTTCAAGACGTGAAAGGGAAGAGATAGAGAAGCAGAAAGCT
JMFN013I03+           ATGGAGAAAACAACTGAACTTTCAAGACGTGAAAGGGAAGAGATAGAGAAGCAGAAAGCT
rJMFF042C08+          ATGGAGAAAACAACTGAACTTTCAAGACGTGAAAGGGAAGAGATAGAGAAGCAGAAAGCT
                      ____________________________________________________________
consensus             ATGGAGAAAACAACTGAACTTTCAAGACGTGAAAGGGAAGAGATAGAGAAGCAGAAAGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           CATGAACGTTACATGAGGCTCCAGGAACAAGGGAAAACTGAGCAAGCAAAGAAAGACTTA
JMFF042C08-           CATGAACGTTACATGAGGCTCCAGGAACAAGGGAAAACTGAGCAAGCAAAGAAAGACTTA
JMFN013I03+           CATGAACGTTACATGAGGCTCCAGGAACAAGGGAAAACTGAGCAAGCAAAGAAAGACTTA
rJMFF042C08+          CATGAACGTTACATGAGGCTCCAGGAACAAGGGAAAACTGAGCAAGCAAAGAAAGACTTA
                      ____________________________________________________________
consensus             CATGAACGTTACATGAGGCTCCAGGAACAAGGGAAAACTGAGCAAGCAAAGAAAGACTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           GAACGCTTGGCCATGATAAGGCAACAGAGAGCAGAAGCTGCTAAGAAGCGCGAAGAGGAG
JMFF042C08-           GAACGCTTGGCCATGATAAGGCAACAGAGAGCAGAAGCTGCTAAGAAGCGCGAAGAGGAG
JMFN013I03+           GAACGCTTGGCCATGATAAGGCAACAGAGAGCAGAAGCTGCTAAGAAGCGCGAAGAGGAG
rJMFF042C08+          GAACGCTTGGCCATGATAAGGCAACAGAGAGCAGAAGCTGCTAAGAAGCGCGAAGAGGAG
                      ____________________________________________________________
consensus             GAACGCTTGGCCATGATAAGGCAACAGAGAGCAGAAGCTGCTAAGAAGCGCGAAGAGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           AAAGCTGCCAAAGAACAGAAGAAACTGGAAGCGCGAAAGTGAGATTTCGTGAATGCTTAG
JMFF042C08-           AAAGCTGCCAAAGAACAGAAGAAACTGGAAGCGCGAAAGTGAGATTTCGTGAATGCTTAG
JMFN013I03+           AAAGCTGCCAAAGAACAGAAGAAACTGGAAGCGCGAAAGTGAGATTTCGTGAATGCTTAG
rJMFF042C08+          AAAGCTGCCAAAGAACAGAAGAAACTGGAAGCGCGAAAGTGAGATTTCGTGAATGCTTAG
                      ____________________________________________________________
consensus             AAAGCTGCCAAAGAACAGAAGAAACTGGAAGCGCGAAAGTGAGATTTCGTGAATGCTTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN032B09-           GAATGAATTCAAACGGATCTTCCTTACTAT                              
JMFF042C08-           GAATGAATTCAAACGGATCTTCCTTACTATTTATATGTAGCTATAACATATGAAGACTAG
JMFN013I03+           GAATGAATTCAAACGGATCTTCCTTACTATTTATATGTAGCTATAACATATGAAGACTAG
rJMFF042C08+          GAATGAATTCAAACGGATCTTCCTTACTATTTATATGTAGCTATAACATATGAAGACTAG
                      ____________________________________________________________
consensus             GAATGAATTCAAACGGATCTTCCTTACTATTTATATGTAGCTATAACATATGAAGACTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF042C08-           TAATAGGGGTGTTATGTGCA                                        
JMFN013I03+           TAATAGGGGTGTTATGTGCAAGTTTATTTTCATGCTTCTCCAAATAGATGGGTTTCCAAG
rJMFF042C08+          TAATAGGGGTGTTATGTGCAAGTTTATTTTCATGCTTCTCCAAATAGATGGGTTTCCAAG
                      ____________________________________________________________
consensus             TAATAGGGGTGTTATGTGCAAGTTTATTTTCATGCTTCTCCAAATAGATGGGTTTCCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN013I03+           TTTTCAACTTTCCTACGTTTGTACTTTTTCTCTATTGTTGCTTGTTTCCTAAAAACTTGG
rJMFF042C08+          TTTTCAACTTTCCTACGTTTGTACTTTTTCTCTATTGTTGCTTGTTTCCTAAAAACTTGG
                      ____________________________________________________________
consensus             TTTTCAACTTTCCTACGTTTGTACTTTTTCTCTATTGTTGCTTGTTTCCTAAAAACTTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN013I03+           ATACTATATTTTGTTGACATATGTGCATTTGATTGTCAGTTACGGAGTATC         
rJMFF042C08+          ATACTATATTTTGTTGACATATGTGCATTTGATTGTCAGTTACGGAGTATCATTTACTGA
                      ____________________________________________________________
consensus             ATACTATATTTTGTTGACATATGTGCATTTGATTGTCAGTTACGGAGTATCATTTACTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF042C08+          TTTAATACCTCACCAAATAGAATTTGTTACTTCAATAAAAAAAAAAAAAACTCTCCAGGG
                      ____________________________________________________________
consensus             TTTAATACCTCACCAAATAGAATTTGTTACTTCAATAAAAAAAAAAAAAACTCTCCAGGG