Contig 011144:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF033D05Sequence555006055 (2)758011144 (2)ref|XP_009777972.1|1e-38PREDICTED: UPF0481 protein At3g47200-like, partial [Nicotiana sylvestris]
JMFF041E04Sequence644006055 (2)620011144 (2)ref|XP_004236861.1|2e-35PREDICTED: putative UPF0481 protein At3g02645 isoform X1 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF033D05+                   CAAACAGTTAACAAAGAGTGGCCAACACTAGTGCATATTATCAGTGCCACG
                      ____________________________________________________________
consensus                      CAAACAGTTAACAAAGAGTGGCCAACACTAGTGCATATTATCAGTGCCACG
 
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rJMFF033D05+          GAGCTTCAAGACGTGGGAGTTATGTTTCATAACACTAGCGTAATCTACACTATGCCAAGG
                      ____________________________________________________________
consensus             GAGCTTCAAGACGTGGGAGTTATGTTTCATAACACTAGCGTAATCTACACTATGCCAAGG
 
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rJMFF033D05+          CAATACCACACAGTTTCATCCTTAAAAGAGTGCAAGGATACAACTAGCCTATTCGACATA
rJMFF041E04+                                                  CAACTAGCCTATTCGACATA
                      ____________________________________________________________
consensus             CAATACCACACAGTTTCATCCTTAAAAGAGTGCAAGGATACAACTAGCCTATTCGACATA
 
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rJMFF033D05+          ACCTTTTCGGGCGGGGTGATGAAGATTCCTTCTTTCAAAGTCGACGACTTCACTGAAATA
rJMFF041E04+          ACCTTTTCGGGCGGGGTGATGAAGATTCCTTCTTTCAAAGTCGACGACTTCACTGAAATA
                      ____________________________________________________________
consensus             ACCTTTTCGGGCGGGGTGATGAAGATTCCTTCTTTCAAAGTCGACGACTTCACTGAAATA
 
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rJMFF033D05+          TTCTTCCGAAACATGATTGCCCTGGAGCAATGCCGCACTCTAAAACCCAAATACTACACA
rJMFF041E04+          TTCTTCCGAAACATGATTGCCCTGGAGCAATGCCGCACTCTAAAACCCAAATACTACACA
                      ____________________________________________________________
consensus             TTCTTCCGAAACATGATTGCCCTGGAGCAATGCCGCACTCTAAAACCCAAATACTACACA
 
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rJMFF033D05+          GATTACGCCAGGTTGATGGACCACCTGGTGGACACCAATAAAGACGTGAGTTTGCTCCGC
rJMFF041E04+          GATTACGCCAGGTTGATGGACCACCTGGTGGACACCAATAAAGACGTGAGTTTGCTCCGC
                      ____________________________________________________________
consensus             GATTACGCCAGGTTGATGGACCACCTGGTGGACACCAATAAAGACGTGAGTTTGCTCCGC
 
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rJMFF033D05+          AAGAATGGAACCATTCACAACCTTTTAGGCGAAGATAAGAATGTGGCCGATGTGTTCAAC
rJMFF041E04+          AAGAATGGAACCATTCACAACCTTTTAGGCGAAGATAAGAATGTGGCCGATGTGTTCAAC
                      ____________________________________________________________
consensus             AAGAATGGAACCATTCACAACCTTTTAGGCGAAGATAAGAATGTGGCCGATGTGTTCAAC
 
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rJMFF033D05+          AGTGTGTGTGTTAAGGTAGATATTACCACCAACTTCTATTTTGCACCGCTCTACACAGCT
rJMFF041E04+          AGTGTGTGTGTTAAGGTAGATATTACCACCAACTTCTATTTTGCACCGCTCTACACAGCT
                      ____________________________________________________________
consensus             AGTGTGTGTGTTAAGGTAGATATTACCACCAACTTCTATTTTGCACCGCTCTACACAGCT
 
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rJMFF033D05+          CTGAATCGCCATTGTAGCAACAGACTCCTTGTGTGGAAGGCAAGACTAAAAAATGATTAT
rJMFF041E04+          CTGAATCGCCATTGTAGCAACAGACTCCTTGTGTGGAAGGCAAGACTAAAAAATGATTAT
                      ____________________________________________________________
consensus             CTGAATCGCCATTGTAGCAACAGACTCCTTGTGTGGAAGGCAAGACTAAAAAATGATTAT
 
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rJMFF033D05+          TTCTCCGATCCGTGGAAAGGGATTTCCTCTATTGCTGGTGCTATCGTCTTGTTACTTGGT
rJMFF041E04+          TTCTCCGATCCGTGGAAAGGGATTTCCTCTATTGCTGGTGCTATCGTCTTGTTACTTGGT
                      ____________________________________________________________
consensus             TTCTCCGATCCGTGGAAAGGGATTTCCTCTATTGCTGGTGCTATCGTCTTGTTACTTGGT
 
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rJMFF033D05+          GCCGCCCTCACACTCAAAAGTCTACTTTCTTAGACCCACCTCATTTCTCAATATGTGCAC
rJMFF041E04+          GCCGCCCTCACACTCAAAAGTCTACTTTCTTAGACCCACCTCATTTCTCAATATGTGCAC
                      ____________________________________________________________
consensus             GCCGCCCTCACACTCAAAAGTCTACTTTCTTAGACCCACCTCATTTCTCAATATGTGCAC
 
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rJMFF033D05+          TACTTCAACTAGCTTCAATTCATCATTAATGTGTACTTTATACTAGCTGGTCACAATAAA
rJMFF041E04+          TACTTCAACTAGCTTCAATTCATCATTAATGTGTACTTTATACTAGCTGGTCACAATAAA
                      ____________________________________________________________
consensus             TACTTCAACTAGCTTCAATTCATCATTAATGTGTACTTTATACTAGCTGGTCACAATAAA
 
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rJMFF033D05+          AGCGACGCATCTAGCTAGTTGCAAGGCTTAGTGTCTTA                      
rJMFF041E04+          AGCGACGCATCTAGCTAGTTGCAAGGCTTAGTGTCTTATGACCAGAGTTCATTAATGTGT
                      ____________________________________________________________
consensus             AGCGACGCATCTAGCTAGTTGCAAGGCTTAGTGTCTTATGACCAGAGTTCATTAATGTGT