Contig 011139:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035L17Sequence484002896 (7)ref|XP_009794858.1|88.2PREDICTED: uncharacterized protein LOC104241615 [Nicotiana sylvestris] ref|XP_00160011139 (2)
JMFF040M08Sequence488002896 (7)ref|XP_009794858.1|88.2PREDICTED: uncharacterized protein LOC104241615 [Nicotiana sylvestris] ref|XP_00186011139 (2)

Alignment

This contig is upended


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rJMFF040M08+                                                                CCNGGN
                      ____________________________________________________________
consensus                                                                   CCNGGN
 
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rJMFF035L17+                                                           TTTTTTTTTTT
rJMFF040M08+          CCCCCCNTGNANGGTNNNGNCCNTNNNGNCGGGTTCNANCCCGGGNGGNTTTTTTTTTTT
                      ____________________________________________________________
consensus             CCCCCCNTGNANGGTNNNGNCCNTNNNGNCGGGTTCNANCCCGGGNGGNTTTTTTTTTTT
 
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rJMFF035L17+          TTTCGCCCGTTTGTAATTAGTGTACTAGAGTTTGAAAACACCATGACCAATCATACAGTT
rJMFF040M08+          TTTCGCCCGTTTGTAATTAGTGTACTAGAGTTTGAAAACACCATGACCAATCATACAGTT
                      ____________________________________________________________
consensus             TTTCGCCCGTTTGTAATTAGTGTACTAGAGTTTGAAAACACCATGACCAATCATACAGTT
 
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rJMFF035L17+          GTAAAATCTTTTCACCAAACAAAATTTCTTTATACTCATGCCTCATCTTATACATCG   
rJMFF040M08+          GTAAAATCTTTTCACCAAACAAAATTTCTTTATACTCATGCCTCATCTTATACATCGATC
                      ____________________________________________________________
consensus             GTAAAATCTTTTCACCAAACAAAATTTCTTTATACTCATGCCTCATCTTATACATCGATC