Contig 011138:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040F22Sequence447013313 (9)ref|XP_009786123.1|119PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris]755011138 (2)ref|XP_006346625.1|205PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum]
JMSF034G18Sequence700013313 (9)ref|XP_009786123.1|303PREDICTED: uncharacterized protein LOC104234287 [Nicotiana sylvestris]725011138 (2)ref|XP_006346625.1|201PREDICTED: uncharacterized protein LOC102590754 [Solanum tuberosum]

Alignment

This contig is upended


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rJMSF034G18+                                               GGAGTCATGTTCTGATGCTGTGG
rJMFF040F22+                                   TGAATATTATGTGGAGTCATGTTNTGATGCTGTGG
                      ____________________________________________________________
consensus                                      TGAATATTATGTGGAGTCATGTTCTGATGCTGTGG
 
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rJMSF034G18+          TTAATGATAAATGTGTTCATACCAAAAGTGCAAGTGTAATTTTGCCAAGTGGAGGGGATG
rJMFF040F22+          TTAATGATAAATGTGTTCATACCAAAAGTGCAAGTGTAATTTTGCCAAGTGGAGGGGATG
                      ____________________________________________________________
consensus             TTAATGATAAATGTGTTCATACCAAAAGTGCAAGTGTAATTTTGCCAAGTGGAGGGGATG
 
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rJMSF034G18+          TCATCTATGCTGTTGCCCACCAGCACGCAGGAGCTATTGGTTCAACTCTTTATGGACAGG
rJMFF040F22+          TCATCTATGCTGTTGCCCACCAGCACGCAGGAGCTATTGGTTCAACTCTTTATGGACAGG
                      ____________________________________________________________
consensus             TCATCTATGCTGTTGCCCACCAGCACGCAGGAGCTATTGGTTCAACTCTTTATGGACAGG
 
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rJMSF034G18+          ATGGACGGACAATATGCTCATCCCTCCCTATTTACGGGAAGGGAAAGGAGGCTGGAAATG
rJMFF040F22+          ATGGACGGACAATATGCTCATCCCTCCCTATTTACGGGAAGGGAAAGGAGGCTGGAAATG
                      ____________________________________________________________
consensus             ATGGACGGACAATATGCTCATCCCTCCCTATTTACGGGAAGGGAAAGGAGGCTGGAAATG
 
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rJMSF034G18+          AAGCGGGATACATTGTAGGAATGACAACTTGTTATCCTCGACCTGGTTCTGTCAAGATTG
rJMFF040F22+          AAGCGGGATACATTGTAGGAATGACAACTTGTTATCCTCGACCTGGTTCTGTCAAGATTG
                      ____________________________________________________________
consensus             AAGCGGGATACATTGTAGGAATGACAACTTGTTATCCTCGACCTGGTTCTGTCAAGATTG
 
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rJMSF034G18+          TTGAGGGGGAGATGATAACCATTATGTCTAATTATAGCAATAGCCAGAGCCACACTGGAG
rJMFF040F22+          TTGAGGGGGAGATGATAACCATTATGTCTAATTATAGCAATAGCCAGAGCCACACTGGAG
                      ____________________________________________________________
consensus             TTGAGGGGGAGATGATAACCATTATGTCTAATTATAGCAATAGCCAGAGCCACACTGGAG
 
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rJMSF034G18+          TCATGGGTTTTTTCTACCTTGCTGTTGCTGAACCTTTGAAGAAACCCAACTCTATCTTGC
rJMFF040F22+          TCATGGGTTTTTTCTACCTTGCTGTTGCTGAACCTTTGAAGAAACCCAACTCTATCTTGC
                      ____________________________________________________________
consensus             TCATGGGTTTTTTCTACCTTGCTGTTGCTGAACCTTTGAAGAAACCCAACTCTATCTTGC
 
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rJMSF034G18+          ATGCTCAAAACTAGAGATAAACAGACATTTGGATTGATTTTGCCCGGTGATGCCATGATC
rJMFF040F22+          ATGCTCAAAACTAGAGATAAACAGACATTTGGATTGATTTTGCCCGGTGATGCCATGATC
                      ____________________________________________________________
consensus             ATGCTCAAAACTAGAGATAAACAGACATTTGGATTGATTTTGCCCGGTGATGCCATGATC
 
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rJMSF034G18+          CCAACAAATGGCCTTTGGGGCTTTATTTGCACCGTGTGGAATTGCAAATTGTAACAATGG
rJMFF040F22+          CCAACAAATGGCCTTTGGGGCTTTATTTGCACCGTGTGGAATTGCAAATTGTAACAATGG
                      ____________________________________________________________
consensus             CCAACAAATGGCCTTTGGGGCTTTATTTGCACCGTGTGGAATTGCAAATTGTAACAATGG
 
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rJMSF034G18+          CTACGAACCTATAGTTGTTTGAGGCGGCTGTTTCATGCTCTGGTTTACATGTTTGCTGTG
rJMFF040F22+          CTACGAACCTATAGTTGTTTGAGGCGGCTGTTTCATGCTCTGGTTTACATGTTTGCTGTG
                      ____________________________________________________________
consensus             CTACGAACCTATAGTTGTTTGAGGCGGCTGTTTCATGCTCTGGTTTACATGTTTGCTGTG
 
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rJMSF034G18+          TAATATGGAAAATGATATAGGTTGTGTGTAATAAAAATTGTGGTCCATATTTTTTTAAGT
rJMFF040F22+          TAATATGGAAAATGATATAGGTTGTGTGTAATAAAAGTTGTGGTCCATATTTTTTTAAGT
                      ____________________________________________________________
consensus             TAATATGGAAAATGATATAGGTTGTGTGTAATAAAAGTTGTGGTCCATATTTTTTTAAGT
 
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rJMSF034G18+          GAATCAAAAGGTGACATGCAAGCAGGCAATATAAAATATAATAGAATGTGGGAGTACATG
rJMFF040F22+          GAATCAAAAGGTGACATGCAAGCAGGCAATATAAAATATAATAGAATGTGGGAGTACATG
                      ____________________________________________________________
consensus             GAATCAAAAGGTGACATGCAAGCAGGCAATATAAAATATAATAGAATGTGGGAGTACATG
 
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rJMSF034G18+          TAGTATTACTCTGTAATATTACTACTTTTTTTTATCGTCTTT                  
rJMFF040F22+          TAGTATTACTCTGTAATATTACTACTTTTTTTTATCGTCTTTTGTGTTTCTTTTTAAATT
                      ____________________________________________________________
consensus             TAGTATTACTCTGTAATATTACTACTTTTTTTTATCGTCTTTTGTGTTTCTTTTTAAATT