Contig 011137:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040E11Sequence605011137 (2)ref|XP_006339914.1|3e-24PREDICTED: patatin-05-like [Solanum tuberosum]789011137 (2)ref|XP_004238176.1|2e-29PREDICTED: patatin-like protein 2 [Solanum lycopersicum]

Alignment

This contig is upended


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JMFF040E11-                                                 ACATTAAAGAAACCAACAAAAA
                      ____________________________________________________________
consensus                                                   ACATTAAAGAAACCAACAAAAA
 
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JMFF040E11-           TCTTTATCATTTCTCTTGATAACATTTTTTTTCTATATCATACCAATCCTTTGAAATGGG
                      ____________________________________________________________
consensus             TCTTTATCATTTCTCTTGATAACATTTTTTTTCTATATCATACCAATCCTTTGAAATGGG
 
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JMFF040E11-           AAACACCCAGACAACCCCATCAGCCCCATCCTCCGCCGCCAATCCCGCCACCGGAGAGTA
                      ____________________________________________________________
consensus             AAACACCCAGACAACCCCATCAGCCCCATCCTCCGCCGCCAATCCCGCCACCGGAGAGTA
 
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JMFF040E11-           CAATGCTGCGTCCATCCCTCCCGGCGGCGTTATCACCATCCTTAGCATTGACGGAGGTGG
                      ____________________________________________________________
consensus             CAATGCTGCGTCCATCCCTCCCGGCGGCGTTATCACCATCCTTAGCATTGACGGAGGTGG
 
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JMFF040E11-           CATCCGTGGCATCATCCCCGGCACCATTGTCGCTTACCTTGAAGAGGAGCTTCAAGCTTT
rJMFF040E11+                                                             TCAAGCTTT
                      ____________________________________________________________
consensus             CATCCGTGGCATCATCCCCGGCACCATTGTCGCTTACCTTGAAGAGGAGCTTCAAGCTTT
 
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JMFF040E11-           GGACGGTCCGGATGCAAGAGCAGCGGACTACTTCGATGTGATTGCCGGAACGAGCACCGG
rJMFF040E11+          GGACGGTCCGGATGCAAGAGCAGCGGACTACTTCGATGTGATTGCCGGAACGAGCACCGG
                      ____________________________________________________________
consensus             GGACGGTCCGGATGCAAGAGCAGCGGACTACTTCGATGTGATTGCCGGAACGAGCACCGG
 
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JMFF040E11-           AGGGCTGATGACCACCATGTTA-TCGGCGCCGGACAAGAACAAGCGCCCCCTCTACGCCG
rJMFF040E11+          AGGGCTGATGACCACCATGTTATTCGGCGCCGGACAAGAACAAGCGCCCCCTCTACGCCG
                      ____________________________________________________________
consensus             AGGGCTGATGACCACCATGTTATTCGGCGCCGGACAAGAACAAGCGCCCCCTCTACGCCG
 
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JMFF040E11-           GCAAGGATATTGTCCCTTTCTACAAGGAGCACGGACCAAAGATCTTCCCATCAGCAGGAA
rJMFF040E11+          GCAAGGATATTGTCCCTTTCTACAAGGAGCACGGACCAAAGATCTTCCCATCAGCAGGAA
                      ____________________________________________________________
consensus             GCAAGGATATTGTCCCTTTCTACAAGGAGCACGGACCAAAGATCTTCCCATCAGCAGGAA
 
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JMFF040E11-           TATTTGAGGTGGTGAGAGACGCAACCAGCCTGTTGGCCGGTCCCAAGTAAGACGGCAACC
rJMFF040E11+          TATTTGAGGTGGTGAGAGACGCAACCAGCCTGTTGGCCGGTCCCAAGTAAGACGGCAACC
                      ____________________________________________________________
consensus             TATTTGAGGTGGTGAGAGACGCAACCAGCCTGTTGGCCGGTCCCAAGTAAGACGGCAACC
 
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JMFF040E11-           CTTTGATTGATGTATTCTCCGTTGCAAGTGCGGACATGGTGGATTATCATATCGCCACCA
rJMFF040E11+          CTTTGATTGATGTATTCTCCGTTGCAAGTGCGGACATGGTGGATTATCATATCGCCACCA
                      ____________________________________________________________
consensus             CTTTGATTGATGTATTCTCCGTTGCAAGTGCGGACATGGTGGATTATCATATCGCCACCA
 
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JMFF040E11-           TTTTCCAGGCTCTTCAAGCCGGAGATAACTATCTCCGCATCCAG                
rJMFF040E11+          TTTTCCAGGCTCTTCAAGCCGGAGATAACTATCTCCGCATCCAGGAGGACGATTTAAAAG
                      ____________________________________________________________
consensus             TTTTCCAGGCTCTTCAAGCCGGAGATAACTATCTCCGCATCCAGGAGGACGATTTAAAAG
 
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rJMFF040E11+          GGTCGACAGCCTCGGTTGATGTTACGACAAAAGAAAATTTGGATGCACTTGAAGAGGTTG
                      ____________________________________________________________
consensus             GGTCGACAGCCTCGGTTGATGTTACGACAAAAGAAAATTTGGATGCACTTGAAGAGGTTG
 
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rJMFF040E11+          GCAAGAAGTTGTTGACGAAACCGGTTTTGAAGCTGAATCTGTTGACAGGGAAGAATGAAC
                      ____________________________________________________________
consensus             GCAAGAAGTTGTTGACGAAACCGGTTTTGAAGCTGAATCTGTTGACAGGGAAGAATGAAC
 
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rJMFF040E11+          CGGTCCCCAAAGCTGGAACAAACAAAGATGCTCTGAAAAGGTTGGCCGGTTTGCTGTCGG
                      ____________________________________________________________
consensus             CGGTCCCCAAAGCTGGAACAAACAAAGATGCTCTGAAAAGGTTGGCCGGTTTGCTGTCGG
 
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rJMFF040E11+          AGGAGAGGAGGCGCCGTACAATCGCGGCACTTAACGGCGGCAAGTAGTTAAGTTACGGTG
                      ____________________________________________________________
consensus             AGGAGAGGAGGCGCCGTACAATCGCGGCACTTAACGGCGGCAAGTAGTTAAGTTACGGTG
 
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rJMFF040E11+          TTGATCAACATTGAGATCATATGTATCGTGTGTCTTTAATTTCTGCTACTTGAATTATTG
                      ____________________________________________________________
consensus             TTGATCAACATTGAGATCATATGTATCGTGTGTCTTTAATTTCTGCTACTTGAATTATTG
 
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rJMFF040E11+          AATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCATTGGGATTGGTTACATATGT
                      ____________________________________________________________
consensus             AATAAGGCACATATCCTTCGACATGAAAAAGGTTGTGCCATTGGGATTGGTTACATATGT
 
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rJMFF040E11+          ATGCTTGTGTATTTTGTATAAACTAGTAAGTGTCCCGTGCTATGTATGGACTATTANTAA
                      ____________________________________________________________
consensus             ATGCTTGTGTATTTTGTATAAACTAGTAAGTGTCCCGTGCTATGTATGGACTATTANTAA