| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010H24 | Sequence | 537 | 013369 (10) | emb|CDX83957.1| | 3e-55 | BnaC08g16880D [Brassica napus] | 693 | 011131 (9) | gb|KDO36650.1| | 1e-75 | hypothetical protein CISIN_1g028965mg [Citrus sinensis] |
| JMFF019D09 | Sequence | 542 | 013369 (10) | emb|CDX83957.1| | 2e-54 | BnaC08g16880D [Brassica napus] | 715 | 011131 (9) | ref|XP_009354238.1| | 1e-77 | PREDICTED: probable serine incorporator [Pyrus x bretschneideri] ref|XP_00935423 |
| JMFF019N22 | Sequence | 539 | 013369 (10) | ref|XP_010532058.1| | 2e-73 | PREDICTED: serine incorporator 3 [Tarenaya hassleriana] ref|XP_010532059.1| PRED | 722 | 011131 (9) | gb|KDO36650.1| | 2e-75 | hypothetical protein CISIN_1g028965mg [Citrus sinensis] |
| JMFF020M04 | Sequence | 545 | 013369 (10) | ref|XP_010532058.1| | 5e-74 | PREDICTED: serine incorporator 3 [Tarenaya hassleriana] ref|XP_010532059.1| PRED | 691 | 011131 (9) | gb|KDO36650.1| | 1e-75 | hypothetical protein CISIN_1g028965mg [Citrus sinensis] |
| JMFF022B03 | Sequence | 501 | 013369 (10) | ref|XP_010532058.1| | 3e-74 | PREDICTED: serine incorporator 3 [Tarenaya hassleriana] ref|XP_010532059.1| PRED | 701 | 011131 (9) | ref|XP_011073234.1| | 2e-79 | PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR |
| JMFF039I24 | Sequence | 580 | 013369 (10) | ref|XP_011034606.1| | 8e-81 | PREDICTED: probable serine incorporator [Populus euphratica] ref|XP_011034607.1| | 741 | 011131 (9) | ref|XP_011073234.1| | 3e-79 | PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR |
| JMSF023I12 | Sequence | 674 | 013369 (10) | gb|KDP41926.1| | 2e-80 | hypothetical protein JCGZ_26944 [Jatropha curcas] | 740 | 011131 (9) | ref|XP_011073234.1| | 3e-79 | PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR |
| JMSF024M20 | Sequence | 636 | 013369 (10) | gb|KDP41926.1| | 6e-84 | hypothetical protein JCGZ_26944 [Jatropha curcas] | 740 | 011131 (9) | ref|XP_011073234.1| | 4e-95 | PREDICTED: probable serine incorporator [Sesamum indicum] ref|XP_011073235.1| PR |
| JMSF044A23 | Sequence | 728 | 013369 (10) | gb|KDP41926.1| | 2e-108 | hypothetical protein JCGZ_26944 [Jatropha curcas] | 738 | 011131 (9) | gb|KDO36651.1| | 2e-64 | hypothetical protein CISIN_1g028965mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
rJMSF024M20+ TGCTCCATCTGGACAAGATTGTGGGATAAACACTT
____________________________________________________________
consensus TGCTCCATCTGGACAAGATTGTGGGATAAACACTT
. : . : . : . : . : . :
rJMSF024M20+ TCTTNATAGTCATGACTCTTATTTTTATCTTCGCCTTTGCTATAGTCACACTTCATCCTT
rJMFF022B03+ GCTATAGTCACACTTCATCNTT
rJMSF023I12+ ATAGTCACACTTCATCCTT
rJMFF019D09+ ACTTCATCCTT
rJMSF044A23+ CTATAGTCACACTTCATCCTT
rJMFF019N22+ TT
rJMFF039I24+ GCTATAGTCACACTTCATCCTT
____________________________________________________________
consensus TCTTNATAGTCATGACTCTTATTTTTATCTTCGCCTTTGCTATAGTCACACTTCATCCTT
. : . : . : . : . : . :
rJMSF024M20+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMFF022B03+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMSF023I12+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMFF019D09+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMSF044A23+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMFF010H24+ TGAAAGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMFF020M04+ GAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMFF019N22+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
rJMFF039I24+ CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
____________________________________________________________
consensus CGGTGAAGGGTAGCATTTTCCCAGCTTCAGTTATATCTCTGTACTGCACATACCTTTGCT
. : . : . : . : . : . :
rJMSF024M20+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMFF022B03+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMSF023I12+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMFF019D09+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMSF044A23+ ACAGTGCACTTGCCAGTGAACCTAGGGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMFF010H24+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMFF020M04+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMFF019N22+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
rJMFF039I24+ ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
____________________________________________________________
consensus ACAGTGCACTTGCCAGTGAACCTA-GGGATTATGAATGCAATGCCCTTCATAAGCACTCA
. : . : . : . : . : . :
rJMSF024M20+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMFF022B03+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMSF023I12+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMFF019D09+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMSF044A23+ AAATCTGTTTCCACTGGTACANTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMFF010H24+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMFF020M04+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMFF019N22+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
rJMFF039I24+ AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
____________________________________________________________
consensus AAATCTGTTTCCACTGGTACACTAACCCTAGGGCTGCTCACAACTGTATTATCTGTTGTC
. : . : . : . : . : . :
rJMSF024M20+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMFF022B03+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMSF023I12+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMFF019D09+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMSF044A23+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMFF010H24+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMFF020M04+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMFF019N22+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
rJMFF039I24+ TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
____________________________________________________________
consensus TACTCTGCTGTCCGTGCTGGATCTTCTACAACTTTGCTTTCCCCTCCTAGCTCACCACGT
. : . : . : . : . : . :
rJMSF024M20+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMFF022B03+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMSF023I12+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMFF019D09+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMSF044A23+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMFF010H24+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMFF020M04+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMFF019N22+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
rJMFF039I24+ GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
____________________________________________________________
consensus GCAGGTGGCGGGAAACCTTTGCTACCATTAGACAAGGCGGATGAGCACGAGGAGATGGAG
. : . : . : . : . : . :
rJMSF024M20+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMFF022B03+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMSF023I12+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMFF019D09+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMSF044A23+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMFF010H24+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMFF020M04+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMFF019N22+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
rJMFF039I24+ AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
____________________________________________________________
consensus AAATCAAAGGCTGTTACATATTCATATTCATTCTTCCACATTATCTTCTCTCTTGCTAGC
. : . : . : . : . : . :
rJMSF024M20+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMFF022B03+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMSF023I12+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMFF019D09+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMSF044A23+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMFF010H24+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMFF020M04+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMFF019N22+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
rJMFF039I24+ ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
____________________________________________________________
consensus ATGTATTCCGCAATGCTGCTCACAGGCTGGTCGACCTCTGTTGGGGAGAGCGGGAAATTG
. : . : . : . : . : . :
rJMSF024M20+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMFF022B03+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMSF023I12+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMFF019D09+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMSF044A23+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMFF010H24+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMFF020M04+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMFF019N22+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
rJMFF039I24+ GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
____________________________________________________________
consensus GTGGACGTTGGATGGGCATCGGTTTGGGTTAGAGTTGTGACTGGGTGGGTGACTGCTGCT
. : . : . : . : . : . :
rJMSF024M20+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMFF022B03+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMSF023I12+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMFF019D09+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMSF044A23+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMFF010H24+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMFF020M04+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMFF019N22+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
rJMFF039I24+ TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
____________________________________________________________
consensus TTATTTCTCTGGTCTCTGGTTGCTCCAATTCTGTTCCCTGATCGGGACTTCTGAGCATCA
. : . : . : . : . : . :
rJMSF024M20+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMFF022B03+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMSF023I12+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMFF019D09+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMSF044A23+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMFF010H24+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMFF020M04+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMFF019N22+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
rJMFF039I24+ TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
____________________________________________________________
consensus TAAGGATGTTGCATAGGAAATCCATATGAAGATAATGACTGAATGTTTATATATTTTCCA
. : . : . : . : . : . :
rJMSF024M20+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGAT
rJMFF022B03+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMSF023I12+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMFF019D09+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMSF044A23+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMFF010H24+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMFF020M04+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMFF019N22+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
rJMFF039I24+ TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
____________________________________________________________
consensus TGACATTCCTGTTGTCTGTGTTAAAACATCTCCTTTTCATGACGATTGATCGACATGTTG
. : . : . : . : . : . :
rJMFF022B03+ GTCTTGCAAGT
rJMSF023I12+ GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAAATGGAAGTG
rJMFF019D09+ GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAA
rJMSF044A23+ GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAAATGGAAGTG
rJMFF010H24+ GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAA
rJMFF020M04+ GTCTTGCAAGTTGGACAAAGTACTTTTGA
rJMFF019N22+ GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAA
rJMFF039I24+ GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAAATGGAAGTGTAGAAGAAGTGCCA
____________________________________________________________
consensus GTCTTGCAAGTTGGACAAAGTACTTTTGATGTCTTAAATGGAAGTGTAGAAGAAGTGCCA