Contig 011130:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038P19Sequence435010325 (3)ref|XP_009761391.1|9e-67PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial isoform X2 [Nicotiana 721011130 (3)gb|EYU46078.1|5e-92hypothetical protein MIMGU_mgv1a006555mg [Erythranthe guttata]
JMFF048K23Sequence555010325 (3)gb|EYU46078.1|2e-77hypothetical protein MIMGU_mgv1a006555mg [Erythranthe guttata]461011130 (3)ref|XP_009761392.1|6e-27PREDICTED: uncharacterized protein LOC104213559 isoform X3 [Nicotiana sylvestri
JMSF005E20Sequence448013433 (7)ref|XP_011094071.1|4e-29PREDICTED: ethanolamine-phosphate cytidylyltransferase-like [Sesamum indicum] r549011130 (3)ref|XP_009761392.1|1e-53PREDICTED: uncharacterized protein LOC104213559 isoform X3 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF038P19+                                                                    TT
                      ____________________________________________________________
consensus                                                                       TT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF038P19+          NTGAGAGATACAAGACTCGAGAATTCTTTGATTTGCCAGCCCCAGCAAAGAAACATTCAT
                      ____________________________________________________________
consensus             NTGAGAGATACAAGACTCGAGAATTCTTTGATTTGCCAGCCCCAGCAAAGAAACATTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+                                                            TTCAACGGCC
rJMFF038P19+          GGTCGGATCTTTGGAGGATTTCTGATGCACAGGGCATTTGAATTAGCGTTTTCAACGGCC
                      ____________________________________________________________
consensus             GGTCGGATCTTTGGAGGATTTCTGATGCACAGGGCATTTGAATTAGCGTTTTCAACGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          TATGCTTTTGCTGGCATGATGCCATCC-TTATGGAAGTTGACCATGTTGATTTCCTAAGA
rJMFF038P19+          TATGCTTTTGCTGGCATGATGCCATCCTTTATGGAAGTTGACCATGTTGATTTCCTAAGA
                      ____________________________________________________________
consensus             TATGCTTTTGCTGGCATGATGCCATCCTTTATGGAAGTTGACCATGTTGATTTCCTAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          CCTGTAGATGTTGGAGACTTCTTGCGTTTCAAATCATGTGTTTTGTACACTGAATACGAG
rJMFF038P19+          CCTGTAGATGTTGGAGACTTCTTGCGTTTCAAATCATGTGTTTTGTACACTGAATACGAG
                      ____________________________________________________________
consensus             CCTGTAGATGTTGGAGACTTCTTGCGTTTCAAATCATGTGTTTTGTACACTGAATACGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          CACACAGATCAGCCACTGATTAATATCGAAGTTGTTGCTCATGTCACAAGGCCAGAACTG
rJMFF048K23+                           GATTAATATGGAAGTTGTTGCTCATGTCACAAGGCCAGAACTG
rJMFF038P19+          CACACAGATCAGCCACTGATTAATATCGAAGTTGTTGCTCATGTCACAAGGCCAGAACTG
                      ____________________________________________________________
consensus             CACACAGATCAGCCACTGATTAATATCGAAGTTGTTGCTCATGTCACAAGGCCAGAACTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          AGATCCAGTGAGGTTTCCAATAAGTTCTACTTCACATTCACTGTCCGCCCAGAGGCTAAG
rJMFF048K23+          AGATCCAGTGAGGTTTCCAATAAGTTTTACTTCACATTCACTGTCCGCCCAGAGGCTAAG
rJMFF038P19+          AGATCCAGTGAGGTTTCCAATAAGTTCTACTTCACATTCACTGTCCGCCCAGAGGCTAAG
                      ____________________________________________________________
consensus             AGATCCAGTGAGGTTTCCAATAAGTTCTACTTCACATTCACTGTCCGCCCAGAGGCTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          GCTCAAAATAATCAATTTATGATTCGGAAGGTGGTTCCAGCCACAGAAGAGGAAGCACGG
rJMFF048K23+          GCTCAAAATAATCAATTTATGATTCGGAAGGTGGTTCCAGCCACAGAAGAGGAAGCACGG
rJMFF038P19+          GCTCAAAATAATCAATTTATGATTCGGAAGGTGGTTCCAGCCACAGAAGAGGAAGCACGG
                      ____________________________________________________________
consensus             GCTCAAAATAATCAATTTATGATTCGGAAGGTGGTTCCAGCCACAGAAGAGGAAGCACGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          ACCATCATTGAACGCATGGATGCAGATTTGTTGCAGGCGAACAAGTAACATCTATATGAA
rJMFF048K23+          ACCATCATTGAACGCGTGGATGCAGATTTGTTGCAGGCGAACAAGTAACATCTATATGAA
rJMFF038P19+          ACCATCATTGAACGCATGGATGCAGATTTGTTGCAGGCGAACAAGTAACATCTATATGAA
                      ____________________________________________________________
consensus             ACCATCATTGAACGCATGGATGCAGATTTGTTGCAGGCGAACAAGTAACATCTATATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          ATCAGGAAAGTTGGATTACCAATTCAACTTGTTATAGATCATACAATATATATATATCTA
rJMFF048K23+          ATCAGGAAAGTTGGATTACCAATTCAACTTGTTATAGATCATACAATATATATATATCTA
rJMFF038P19+          ATCAGGAAAGTTGGATTACCAATTCAACTTGTTATAGATCATACAATATATATATATCTA
                      ____________________________________________________________
consensus             ATCAGGAAAGTTGGATTACCAATTCAACTTGTTATAGATCATACAATATATATATATCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          TTTATAAGCCAGAGGGAGCCAGGGAGGATGCTGGTAAATACCTCTGGACATCAAAGAGGA
rJMFF048K23+          TTTATAAGCCAGAGGGAGCCAGGGAGGATGCTGGTAAATACCTCTGGACATCAAAGAGGA
rJMFF038P19+          TTTATAAGCCAGAGGGAGCCAGGGAGGATGCTGGTAAATACCTCTGGACATCAAAGAGGA
                      ____________________________________________________________
consensus             TTTATAAGCCAGAGGGAGCCAGGGAGGATGCTGGTAAATACCTCTGGACATCAAAGAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF005E20+          TATTTGCTTTTACTGTATTCTCTTTGCAACCCTGATTCTCTGTCAATTCTGCCATTTTTA
rJMFF048K23+          TATTTGCTTTTCCCGTATTCTCTTTGCAA-CCTGATTCTCTGTCAATTCTGCCATTTTTA
rJMFF038P19+          TATTTGCTTTTACTGTATTCTCTTTGCAA-CCTGATTCTCTGTCAATTCTGCCATTTTTA
                      ____________________________________________________________
consensus             TATTTGCTTTTACTGTATTCTCTTTGCAA-CCTGATTCTCTGTCAATTCTGCCATTTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF048K23+          AATTCTGGGGAATGAGCAGTGACATTCTAACTATTCTCTAGGCATAAGATT         
rJMFF038P19+          AATTCTGGGGAATGAGCAGTGACATTCTAACTATTCTCTAGGCATAAGATTGGAAGCAAA
                      ____________________________________________________________
consensus             AATTCTGGGGAATGAGCAGTGACATTCTAACTATTCTCTAGGCATAAGATTGGAAGCAAA