Contig 011128:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001E16Sequence551001657 (14)ref|XP_009596867.1|8e-87PREDICTED: cell division cycle protein 48 homolog [Nicotiana tomentosiformis]646011128 (8)ref|XP_007207287.1|4e-84hypothetical protein PRUPE_ppa001607m1g, partial [Prunus persica] gb|EMJ08486.1|
JMFF017D13Sequence527001657 (14)ref|XP_009786785.1|1e-81PREDICTED: cell division cycle protein 48 homolog [Nicotiana sylvestris] gb|ACS689011128 (8)ref|XP_009787355.1|4e-73PREDICTED: cell division cycle protein 48 homolog [Nicotiana sylvestris]
JMFF017L14Sequence603001657 (14)ref|XP_009596867.1|1e-99PREDICTED: cell division cycle protein 48 homolog [Nicotiana tomentosiformis]759011128 (8)ref|XP_009786804.1|6e-90PREDICTED: cell division cycle protein 48 homolog, partial [Nicotiana sylvestri
JMFF019A10Sequence553001657 (14)ref|XP_009786785.1|7e-87PREDICTED: cell division cycle protein 48 homolog [Nicotiana sylvestris] gb|ACS705011128 (8)ref|XP_009787355.1|4e-124PREDICTED: cell division cycle protein 48 homolog [Nicotiana sylvestris]
JMFF022J24Sequence466001657 (14)gb|KDO49337.1|1e-67hypothetical protein CISIN_1g0036232mg, partial [Citrus sinensis] gb|KDO49338.1|731011128 (8)ref|XP_009787355.1|2e-131PREDICTED: cell division cycle protein 48 homolog [Nicotiana sylvestris]
JMFF038J16Sequence551001657 (14)ref|XP_009596867.1|7e-87PREDICTED: cell division cycle protein 48 homolog [Nicotiana tomentosiformis]552011128 (8)ref|XP_009593345.1|2e-78PREDICTED: cell division cycle protein 48 homolog [Nicotiana tomentosiformis]
JMFS104B07Sequence600011128 (8)ref|NP_001142062.1|2e-124uncharacterized protein LOC100274218 [Zea mays] gb|ACF87566.1| unknown [Zea mays
JMSF024E23Sequence663001657 (14)ref|XP_009786785.1|2e-115PREDICTED: cell division cycle protein 48 homolog [Nicotiana sylvestris] gb|ACS753011128 (8)ref|XP_009786804.1|3e-127PREDICTED: cell division cycle protein 48 homolog, partial [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS104B07- TCCTTCTGCTTTGCGTGAGACAGTTGTTGAAGTGCCCAAT
                      ____________________________________________________________
consensus TCCTTCTGCTTTGCGTGAGACAGTTGTTGAAGTGCCCAAT
 
. : . : . : . : . : . :
JMFS104B07- GTCAGCTGGCAAGATATTGGAGGCCTTGAAAATGTTAAGAGAGAGCTTCAAGAGACTGTT
                      ____________________________________________________________
consensus GTCAGCTGGCAAGATATTGGAGGCCTTGAAAATGTTAAGAGAGAGCTTCAAGAGACTGTT
 
. : . : . : . : . : . :
JMFS104B07- CAATATCCTGTGGAACACCCAGAGAAATTCGAGAAATTTGGCATGTCACCTTCCAAAGGT
                      ____________________________________________________________
consensus CAATATCCTGTGGAACACCCAGAGAAATTCGAGAAATTTGGCATGTCACCTTCCAAAGGT
 
. : . : . : . : . : . :
JMFS104B07- GTTCTTTTCTATGGTCCCCCAGGATGTGGGAAAACTCTACTGGCCAAGGCAATAGCAAAT
                      ____________________________________________________________
consensus GTTCTTTTCTATGGTCCCCCAGGATGTGGGAAAACTCTACTGGCCAAGGCAATAGCAAAT
 
. : . : . : . : . : . :
JMFS104B07- GAATGTCAAGCCAACTTCATTAGTGTTAAAGGGCCAGAATTGCTCACCATGTGGTTTGGA
                      ____________________________________________________________
consensus GAATGTCAAGCCAACTTCATTAGTGTTAAAGGGCCAGAATTGCTCACCATGTGGTTTGGA
 
. : . : . : . : . : . :
JMFS104B07- GAGAGTGAGGCCAATGTTCGAGAAATTTTTGACAAGGCTAGAGGATCAGCCCCATGTGTT
rJMFF022J24+ ATCAGCGCCATGTGTT
                      ____________________________________________________________
consensus GAGAGTGAGGCCAATGTTCGAGAAATTTTTGACAAGGCTAGAGGATCAGCGCCATGTGTT
 
. : . : . : . : . : . :
JMFS104B07- CTGTTCTTTGATGAGCTTGACTCTATTGCCACTCAGAGAGGAAGCAGTGTTGGAGATGCT
rJMFF022J24+ CTCTTCTTTGATGAGCTTGACTCGATTGCCACTCAGAGGGGAAGCAGCGTCGGGGATGCT
rJMSF024E23+ TCGGGGATGCT
rJMFF019A10+ ATGAGCTTGACTCGATTGCCACTCAGAGGGGAAGCAGCGTCGGGGATGCT
rJMFF017L14+ GACTCGATTGCCACTCAGAGGGGAAGCAGCGTCGGGGATGCT
                      ____________________________________________________________
consensus CTGTTCTTTGATGAGCTTGACTCGATTGCCACTCAGAGGGGAAGCAGCGTCGGGGATGCT
 
. : . : . : . : . : . :
JMFS104B07- GGTGGTGCAGCTGATCGAGTTCTTAACCAACTTCTGACTGAAATGGATGGCATGACTGCA
rJMFF022J24+ GGTGGTGCAGCTGATCGGGTTCTTAACCAACTTCTAACTGAAATGGATGGCATGACTGCA
rJMSF024E23+ GGTGGTGCAGCTGATCGGGTTCTTAACCAACTTCTAACTGAAATGGATGGCATGACTGCA
rJMFF019A10+ GGTGGTGCAGCTGATCGGGTTCTTAACCAACTTCTAACTGAAATGGATGGCATGACTGCA
rJMFF017L14+ GGTGGTGCAGCTGATCGGGTTCTTAACCAACTTCTAACTGAAATGGATGGCATGACTGCA
                      ____________________________________________________________
consensus GGTGGTGCAGCTGATCGGGTTCTTAACCAACTTCTAACTGAAATGGATGGCATGACTGCA
 
. : . : . : . : . : . :
JMFS104B07- -AAGAAGACTGTTTTCATAATTGGGGCTACAAATAGGCCTGATATAATTGATCCTGCTCT
rJMFF022J24+ -AAAAAGACTGTTTTCATAATTGGGGCTACAAACAGACCTGACATAATTGACCCTGCACT
rJMSF024E23+ -AAAAAGACTGTTTTCATAATTGGGGCTACAAACAGACCTGACATAATTGACCCTGCACT
rJMFF019A10+ -AAAAAGACTGTTTTCATAATTGGGGCTACAAACAGACCTGACATAATTGACCCTGCACT
rJMFF017L14+ NNAAAAGACTGTTTTCATAATTGGGGCTACAAACAGACCTGACATAATTGACCCTGCACT
                      ____________________________________________________________
consensus -AAAAAGACTGTTTTCATAATTGGGGCTACAAACAGACCTGACATAATTGACCCTGCACT
 
. : . : . : . : . : . :
JMFS104B07- TCTTCGCCCTGGCCGACTTGATCAGTTAATTTATATTCCTCTTCCTGATGAAGATTCACG
rJMFF022J24+ CCTTCGTCCTGGCAGACTTGATCAATTAATTTATATCCCTCTCCCTGATGAGGATTCACG
rJMSF024E23+ CCTTCGTCCTGGCAGACTTGATCAATTAATTTATATCCCTCTCCCTGATGAGGATTCACG
rJMFF017D13+ TGGCAGACTTGATCAATTAATTTATATCCCTCTCCCTGATGAGGATTCACG
rJMFF001E16+ GATGAGGATTCACG
rJMFF019A10+ CCTTCGTCCTGGCAGACTTGATCAATTAATTTATATCCCTCTCCCTGATGAGGATTCACG
rJMFF017L14+ CCTTCGTCCTGGCAGACTTGATCAATTAATTTATATCCCTCTCCCTGATGAGGATTCACG
rJMFF038J16+ TGATGAGGATTCACG
                      ____________________________________________________________
consensus CCTTCGTCCTGGCAGACTTGATCAATTAATTTATATCCCTCTCCCTGATGAGGATTCACG
 
. : . : . : . : . : . :
JMFS104B07- CCATCAGATCTTCAAGGCTTG
rJMFF022J24+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
rJMSF024E23+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
rJMFF017D13+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
rJMFF001E16+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
rJMFF019A10+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
rJMFF017L14+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
rJMFF038J16+ CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
                      ____________________________________________________________
consensus CCACCAGATTTTCAAGGCTTGCCTTAGAAAATCTCCTCTTTCAAAAGATATTGATCTGCG
 
. : . : . : . : . : . :
rJMFF022J24+ AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
rJMSF024E23+ AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
rJMFF017D13+ AGCTCTTGCAAAATACACTCATGGATTTCNGTGGAGCTGATATTACAGAAATCTGCCAGC
rJMFF001E16+ AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
rJMFF019A10+ AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
rJMFF017L14+ AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
rJMFF038J16+ AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
                      ____________________________________________________________
consensus AGCTCTTGCAAAATACACTCATGGATTT-AGTGGAGCTGATATTACAGAAATCTGCCAGC
 
. : . : . : . : . : . :
rJMFF022J24+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
rJMSF024E23+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
rJMFF017D13+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
rJMFF001E16+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
rJMFF019A10+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
rJMFF017L14+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
rJMFF038J16+ GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
                      ____________________________________________________________
consensus GAGCCTGCAAATATGCCATTAGGGAGAACATTGAGAAAGATATAGAGAGGGAGAAGAGGA
 
. : . : . : . : . : . :
rJMFF022J24+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
rJMSF024E23+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
rJMFF017D13+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
rJMFF001E16+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
rJMFF019A10+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
rJMFF017L14+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGGCGGATTAAG
rJMFF038J16+ GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
                      ____________________________________________________________
consensus GAAGTGAGAATCCTGATTCCATGGATGAGGATGTTGAGGATGAAATATCGG-AGATTAAG
 
. : . : . : . : . : . :
rJMFF022J24+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
rJMSF024E23+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
rJMFF017D13+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
rJMFF001E16+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
rJMFF019A10+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
rJMFF017L14+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
rJMFF038J16+ CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
                      ____________________________________________________________
consensus CCTGCACATTTTGAGGAGTCCATGAAGTATGCTCGTCGCAGCGTTAGTGATGCTGATATA
 
. : . : . : . : . : . :
rJMFF022J24+ CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
rJMSF024E23+ CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
rJMFF017D13+ CGCAAGTAGCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
rJMFF001E16+ CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
rJMFF019A10+ CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
rJMFF017L14+ CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
rJMFF038J16+ CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
                      ____________________________________________________________
consensus CGCAAGTACCAGGCATTTGCTCAGACGTTGCAGCAGTCTCGAGGCTTTGGAACCGAGTTC
 
. : . : . : . : . : . :
rJMFF022J24+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGAGCTGACCCGTTTGCGACATCCACT
rJMSF024E23+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGAGCTGACCCGTTTGCGACATCCACT
rJMFF017D13+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGAGCTGACCCGTTTGCGACATCCACT
rJMFF001E16+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGAGCTGACCCGTTTGCGACATCCACT
rJMFF019A10+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGAGCTGACCCGTTTGCGACATCCACT
rJMFF017L14+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGA-CTGACCCGTTTGCGACATCCACT
rJMFF038J16+ CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGA-CTGACCCGTTTGCGACATCCACT
                      ____________________________________________________________
consensus CGCTTTGCTGAGTCAGGATCCGGCGGTGCTTCCGGAGCTGACCCGTTTGCGACATCCACT
 
. : . : . : . : . : . :
rJMFF022J24+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAGACATGTTAGAATGTCCTCCTACCC
rJMSF024E23+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAG
rJMFF017D13+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAG
rJMFF001E16+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAG
rJMFF019A10+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAGACATGTTAGAATGTCCTCCTACCC
rJMFF017L14+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAGACATGTTAGAATGTCCTCCTACCCTT
rJMFF038J16+ GCTGGAGCCGATGAAGATGACTTGTATAGTTAAGACATGTTAGAATGTCCTCCTACCCTT
                      ____________________________________________________________
consensus GCTGGAGCCGATGAAGATGACTTGTATAGTTAAGACATGTTAGAATGTCCTCCTACCCTT
 
. : . : . : . : . : . :
rJMFF017L14+ GTTATTTTTTTGCAATGACACTTCTGCTTCATTCATTGCTCCCATGACTACTGATTAAC
rJMFF038J16+ GTTATTTTTTTGCAATGACACTTCTGCTTCATTCATTGCTCCCATGACTACTGATTAACT
                      ____________________________________________________________
consensus GTTATTTTTTTGCAATGACACTTCTGCTTCATTCATTGCTCCCATGACTACTGATTAACT