Contig 011126:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026O01Sequence563011126 (5)ref|XP_009629608.1|5e-67PREDICTED: transcription factor BTF3 homolog 4-like [Nicotiana tomentosiformis]715011126 (5)ref|XP_011078804.1|4e-77PREDICTED: transcription factor BTF3 homolog 4-like [Sesamum indicum]
JMFF038H08Sequence503011126 (5)gb|ABM55742.1|9e-63putative transcription factor Btf3 [Capsicum annuum]726011126 (5)ref|XP_011078804.1|2e-77PREDICTED: transcription factor BTF3 homolog 4-like [Sesamum indicum]
JMFN042I02Sequence638011126 (5)ref|XP_011078804.1|1e-76PREDICTED: transcription factor BTF3 homolog 4-like [Sesamum indicum]

Alignment

This contig is upended


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rJMFF026O01-                                                                TCATAT
                      ____________________________________________________________
consensus                                                                   TCATAT
 
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rJMFF026O01-          TCAGTACACACCCAAGGATAGGAAAGATCTCAAATCACTTAAAATGGAACAAATTTTAAT
rJMFF038H08-                                                                   AAT
                      ____________________________________________________________
consensus             TCAGTACACACCCAAGGATAGGAAAGATCTCAAATCACTTAAAATGGAACAAATTTTAAT
 
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rJMFF026O01-          TTTATTTTTGTCCCTCATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
JMFN042I02+                          CATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
rJMFF038H08-          TTTATTTTTGTCCCTCATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
                      ____________________________________________________________
consensus             TTTATTTTTGTCCCTCATCAGCAGCAGCTTCAAAGGTTTCACCATCCACGAGTTGGGGCA
 
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rJMFF026O01-          CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
JMFN042I02+           CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
JMFF026O01+                         TGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
rJMFF038H08-          CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
                      ____________________________________________________________
consensus             CCTCATCGTCATCTTGTTGAGATGCATTTGCACCCGTAGCTGCATCTGCAGTGTCAGCAA
 
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rJMFF026O01-          TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
JMFF038H08+                                  TGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
JMFN042I02+           TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
JMFF026O01+           TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
rJMFF038H08-          TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
                      ____________________________________________________________
consensus             TACCCGGCATTTGCTTTTGGAACTGCTCCGCTAACTTCTTCAAGTTCTCAAGATTGTCGG
 
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rJMFF026O01-          GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
JMFF038H08+           GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
JMFN042I02+           GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
JMFF026O01+           GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
rJMFF038H08-          GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
                      ____________________________________________________________
consensus             GACCTAATTGGTGAATAATTTCAGGGAGAATATCTTGCAATTTCTTAGTTTGAGGAGAGC
 
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rJMFF026O01-          CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
JMFF038H08+           CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
JMFN042I02+           CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
JMFF026O01+           CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
rJMFF038H08-          CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
                      ____________________________________________________________
consensus             CGCTCACAACCCAAGTATTTGCAGCAATTGAAGCTTGAACTTTTGGATTAATAAACTGGA
 
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rJMFF026O01-          TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
JMFF038H08+           TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
JMFN042I02+           TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
JMFF026O01+           TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
rJMFF038H08-          TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
                      ____________________________________________________________
consensus             TAACTACATCCTCCTTGAAAATGTTCACCTCTTCTATGGCAGGAATTGCATTCACCCCGA
 
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rJMFF026O01-          TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
JMFF038H08+           TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
JMFN042I02+           TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
JMFF026O01+           TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
rJMFF038H08-          TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
                      ____________________________________________________________
consensus             TTCTCTTGAGAGTACTTTGAAGTCTTTTGTCATCCGTAGTAGTAGCTTTGTGAACTGCCT
 
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rJMFF026O01-          TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
JMFF038H08+           TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
JMFN042I02+           TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
JMFF026O01+           TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
rJMFF038H08-          TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
                      ____________________________________________________________
consensus             TCTTCTTTCTCCTCATAGTTCCCTTGCCACCGGTCCGGACAGAGCCGGCCATCCTTTGTA
 
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rJMFF026O01-          GCTTTTCTACATTCATCTCG                                        
JMFF038H08+           GCTTTTCTACATTCATCTCG                                        
JMFN042I02+           GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
JMFF026O01+           GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
rJMFF038H08-          GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
                      ____________________________________________________________
consensus             GCTTTTCTACATTCATCTCGACGACGATGCTTGAGGCGGCTGCAGACCGGGGGCGAGAGC
 
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JMFN042I02+           AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGTTGAAATGTC
JMFF026O01+           AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGTTGAAATGTC
rJMFF038H08-          AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGNTGAAATGTC
                      ____________________________________________________________
consensus             AGCGACGGCAAGAGTGGCTGAGGGCGAGAGTGGCGACAGTTTGGCTAAGGTTGAAATGTC
 
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JMFN042I02+           TTTGAAAGGACTACAGTCAAGAA                                     
JMFF026O01+           TTTGAAAGGACTACAGTCAAGAAACTAAAACCTTAAC                       
rJMFF038H08-          TTTGAAAGGACTACAGTCAAGAAACTAAAACCCTAACAGCCAATATCGGTTCTCGACGAA
                      ____________________________________________________________
consensus             TTTGAAAGGACTACAGTCAAGAAACTAAAACCTTAACAGCCAATATCGGTTCTCGACGAA