| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF038A13 | Sequence | 480 | 003696 (2) | ref|XP_009622782.1| | 5e-79 | PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Nicot | 672 | 011124 (3) | ref|XP_004239811.1| | 1e-74 | PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X3 |
| JMSF009D23 | Sequence | 406 | 014595 | 743 | 011124 (3) | ref|XP_004229250.2| | 4e-108 | PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Solan | |||
| JMSF025P14 | Sequence | 679 | 003696 (2) | ref|XP_009622782.1| | 3e-118 | PREDICTED: eukaryotic translation initiation factor 2 subunit gamma-like [Nicot | 754 | 011124 (3) | ref|XP_004239811.1| | 1e-108 | PREDICTED: eukaryotic translation initiation factor 2 subunit 3-like isoform X3 |
This contig is upended
. : . : . : . : . : . :
rJMSF009D23+ TCAGNGGTGGCGTAGCTGGTGGCAGTATCTTGAAGGGTGTTTTGA
____________________________________________________________
consensus TCAGNGGTGGCGTAGCTGGTGGCAGTATCTTGAAGGGTGTTTTGA
. : . : . : . : . : . :
rJMSF009D23+ AGGTTAANCAAAAAATCGAGGTTCGTCCTGGTATTGTTGTCANGGATGAGAANGGNAACA
rJMSF025P14+ GTCAAGGATGAGAATGGAAACA
____________________________________________________________
consensus AGGTTAANCAAAAAATCGAGGTTCGTCCTGGTATTGTTGTCAAGGATGAGAATGGAAACA
. : . : . : . : . : . :
rJMSF009D23+ TCAAATGCACCCCCATATACTCTAGGATAGTTTCATTATACNCTGAGCAGAATGAACTCC
rJMSF025P14+ TCAAATGCACACCTATATACTCTAGGATAGTTTCATTGTATGCTGAGCAGAATGAACTCC
____________________________________________________________
consensus TCAAATGCACCCCTATATACTCTAGGATAGTTTCATTGTATGCTGAGCAGAATGAACTCC
. : . : . : . : . : . :
rJMSF009D23+ AATTTGCCGTGCCTGGAGGATTAATTGGAGTTGGCACAACCATGGACCCAACGCTGACAC
rJMSF025P14+ AGTTTGCTGTGCCTGGAGGCTTAATTGGAGTTGGCACAACCATGGACCCCACACTGACAC
rJMFF038A13+ CTGACAC
____________________________________________________________
consensus AGTTTGCTGTGCCTGGAGGCTTAATTGGAGTTGGCACAACCATGGACCCCACGCTGACAC
. : . : . : . : . : . :
rJMSF009D23+ GTGCTGATCGATTGGTGGGACAAGTCCTTGNTGAGGTTGGGTCACTTCCAGACATTTTTA
rJMSF025P14+ GTGCTGATCGATTGGTGGGACAAGTCCTTGGTGAGGTTGGGTCACTTCCAGACATTTATA
rJMFF038A13+ GTGGTGATCGATTGGTGGGACAAGTCCTTGGTGAGGTTGGGTCACTTCCAGACATTTATA
____________________________________________________________
consensus GTGCTGATCGATTGGTGGGACAAGTCCTTGGTGAGGTTGGGTCACTTCCAGACATTTATA
. : . : . : . : . : . :
rJMSF009D23+ GTGAGCTAGAGGTGAANTTCTTTTTGNTGCGACGCCTTTTGGGTGTCAGANCAAAAGACA
rJMSF025P14+ GTGAGCTAGAGGTGAATTTCTTTCTGTTGCGACGCCTTTTGGGTGTCAGAACAAAAGACA
rJMFF038A13+ GTGAGCTAGAGGTGAATTTCTTTCTGTTGCGACGCCTTTTGGGTGTCAGAACAAAAGACA
____________________________________________________________
consensus GTGAGCTAGAGGTGAATTTCTTTCTGTTGCGACGCCTTTTGGGTGTCAGAACAAAAGACA
. : . : . : . : . : . :
rJMSF009D23+ CAGAAAAACAGGGCAAGGTCNCAAAGTTGACAAAGGGAGAAATTTTAATGTTGAATATAG
rJMSF025P14+ CAGAAAAGCAGGGCAAGGTGACCAAGTTGACAAAGGGAGAAATACTAATGTTGAATATAG
rJMFF038A13+ CAGAAAAGCAGGGCAAGGTGACCAAGTTGACAAAGGGAGAAATACTAATGTTGAATATAG
____________________________________________________________
consensus CAGAAAAGCAGGGCAAGGTGACCAAGTTGACAAAGGGAGAAATACTAATGTTGAATATAG
. : . : . : . : . : . :
rJMSF009D23+ GATCTATGTCTACTGGAGCTCGTGTCGTTGCCGTCAAGAATGTCTTTGCAAAGCTTCAGT
rJMSF025P14+ GATCTATGTCAACTGGGGCCCGTGTCGTTGCTGTCAAGAATGTGTTTGCAAAACTTCAGT
rJMFF038A13+ GATCTATGTCAACTGGGGCCCGTGTCGTTGCTGTCAAGAATGTGTTTGCAAAACTTCAGT
____________________________________________________________
consensus GATCTATGTCAACTGGGGCCCGTGTCGTTGCTGTCAAGAATGTGTTTGCAAAACTTCAGT
. : . : . : . : . : . :
rJMSF009D23+ TGACNTCCCCCGTGTGCACCAGCAANGGCGAGAAAATTGCTCTCNGTCGGAGAATTGAGA
rJMSF025P14+ TGACATCTCCTGTGTGCACCAGCAAAGGTGAGAAAATTGCTCTCAGTCGGAGAATTGAGA
rJMFF038A13+ TGACATCTCCTGTGTGCACCAGCAAAGGTGAGAAAATTGCTCTCAGTCGGAGAATTGAGA
____________________________________________________________
consensus TGACATCTCCTGTGTGCACCAGCAAAGGTGAGAAAATTGCTCTCAGTCGGAGAATTGAGA
. : . : . : . : . : . :
rJMSF009D23+ AGCATTGGCGACTTATTGGCTGGGGTCAAATTCAAGCCGGANTTACCCCTGATGTCCCCC
rJMSF025P14+ AGCATTGGCGACTTATTGGTTGGGGCCAAATTCAAGCCGGAATTACTCTTGATGTCCCCT
rJMFF038A13+ AGCATTGGCGACTTATTGGTTGGGGCCAAATTCAAGCCGGAATTACTCTTGATGTCCCCT
____________________________________________________________
consensus AGCATTGGCGACTTATTGGTTGGGGCCAAATTCAAGCCGGAATTACTCTTGATGTCCCCT
. : . : . : . : . : . :
rJMSF009D23+ CTGCCCCATNCGAGTGATGTAAGTCAACATTTTTTGGAGAACATGTGAATCTACAAAAGA
rJMSF025P14+ CTGCCCCATTCGAGTGATGTAAGTCAACA-TTTTTGGAGAACTTGTGAATCTACAAAAGA
rJMFF038A13+ CTGCCCCATTCGAGTGATGTAAGTCAACA-TTTTTGGAGAACTTGTGAATCTACAAAAGA
____________________________________________________________
consensus CTGCCCCATTCGAGTGATGTAAGTCAACA-TTTTTGGAGAACTTGTGAATCTACAAAAGA
. : . : . : . : . : . :
rJMSF009D23+ CTTGA
rJMSF025P14+ CTTGAGAGATTAAAACATGGGAGGACAAGAAACTCTGTTGGAAACAACAAAAAAAGAAAA
rJMFF038A13+ CTTGAGAGATTAAAACATGGGAGGACAAGAAACTCTGTTGGAAACAACAAAAAAAGAAAA
____________________________________________________________
consensus CTTGAGAGATTAAAACATGGGAGGACAAGAAACTCTGTTGGAAACAACAAAAAAAGAAAA
. : . : . : . : . : . :
rJMSF025P14+ GTCGGTAGAGGAGATATTGATCATTTTGAATTTTGAATACTAAATCACACTATATTGTCT
rJMFF038A13+ GTCGGTAGAGGAGATATTGATCATTTTGAATTTTGAATACTAAATCACACTATATTGTCT
____________________________________________________________
consensus GTCGGTAGAGGAGATATTGATCATTTTGAATTTTGAATACTAAATCACACTATATTGTCT
. : . : . : . : . : . :
rJMSF025P14+ GTGTTGTTTTTTCCCAATTATATTTTTCTTTTTCTACTCAACCATATTTGCCTTGTTGGA
rJMFF038A13+ GTGTTGTTTTTTCCCAATTATATTTTTCTTTTTCTACTCAA-CATATTTGCCTTGTTGGA
____________________________________________________________
consensus GTGTTGTTTTTTCCCAATTATATTTTTCTTTTTCTACTCAACCATATTTGCCTTGTTGGA
. : . : . : . : . : . :
rJMSF025P14+ GTGTTCTGTATGT
rJMFF038A13+ GTGTTCTGTATGTTGTAATTCATTAGTCTTTTGTGGATGTCAATTTCATCATATGAAGCA
____________________________________________________________
consensus GTGTTCTGTATGTTGTAATTCATTAGTCTTTTGTGGATGTCAATTTCATCATATGAAGCA