Contig 011120:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036A20Sequence537007876 (7)ref|XP_006347070.1|68.9PREDICTED: uncharacterized protein LOC102601713 [Solanum tuberosum]708011120 (2)ref|XP_009771220.1|194PREDICTED: uncharacterized protein LOC104221785 [Nicotiana sylvestris]
JMSF022A02Sequence605007876 (7)ref|XP_006347070.1|68.9PREDICTED: uncharacterized protein LOC102601713 [Solanum tuberosum]658011120 (2)ref|XP_004232845.1|166PREDICTED: uncharacterized protein LOC101266688 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF022A02+                                                   TTTTGGGTTTGCTTGTGAA
rJMFF036A20+                     GTGATCAAGAGCTCGATTTTCTTGTTGCTATTTTGGGTTTGCTTGTGAA
                      ____________________________________________________________
consensus                        GTGATCAAGAGCTCGATTTTCTTGTTGCTATTTTGGGTTTGCTTGTGAA
 
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rJMSF022A02+          TTTGGTAGAGAAGGATACNCGCAACAGATCAAGGCTTGCAGCTGCTAGTGTTTCGTTGCC
rJMFF036A20+          TTTGGTAGAGAAGGATACACGCAACAGATCAAGGCTTGCAGCTGCTAGTGTTTCGTTGCC
                      ____________________________________________________________
consensus             TTTGGTAGAGAAGGATACACGCAACAGATCAAGGCTTGCAGCTGCTAGTGTTTCGTTGCC
 
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rJMSF022A02+          CGGCATGGAAGGTTTGAAGGAGAATTGTACAGANGTGATTCCNNTATTGNGCTCTATCTT
rJMFF036A20+          CGGCATGGAAGGTTTGAAGGAGAATTGTACAGATGTGATTCCATTATTGTGCTCTATCTT
                      ____________________________________________________________
consensus             CGGCATGGAAGGTTTGAAGGAGAATTGTACAGATGTGATTCCATTATTGTGCTCTATCTT
 
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rJMSF022A02+          TTTGGNTAATCAAGGAGCNGGNGAAGCTGCTGGAGAAGGACAATTGACTTGGGATGACGA
rJMFF036A20+          TTTGGCTAATCAAGGAGCAGGTGAAGCTGCTGGAGAAGGACAATTGACTTGGGATGACGA
                      ____________________________________________________________
consensus             TTTGGCTAATCAAGGAGCAGGTGAAGCTGCTGGAGAAGGACAATTGACTTGGGATGACGA
 
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rJMSF022A02+          AGAAGCTCTATTAAAGGGGGAGAAAGAAGCCGAAAAAATGATTGTAGAAGNGTATGCAGC
rJMFF036A20+          AGAAGCTNTATTAAAGGGGGAGAAAGAAGCCGAAAAAATGATTGTAGAAGCGTATGCAGC
                      ____________________________________________________________
consensus             AGAAGCTCTATTAAAGGGGGAGAAAGAAGCCGAAAAAATGATTGTAGAAGCGTATGCAGC
 
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rJMSF022A02+          TNTCCTCCTCGCATTTCTTTCAACCGAAAGTAAGAGCNCCCGCAACTCAATCGCCAAANG
rJMFF036A20+          TNTCCTCCTCGCATTTNTTTCAACCGAAAGTAAGAGCACCCGCAACTCAATCGCCAAATG
                      ____________________________________________________________
consensus             TNTCCTCCTCGCATTTCTTTCAACCGAAAGTAAGAGCACCCGCAACTCAATCGCCAAATG
 
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rJMSF022A02+          TNTTCCTGATCGGAGCTTGGCTGTTCTNGTCCCCGTGTTGGAGAGATTTGTGGATTTTCA
rJMFF036A20+          TNTTCCTGATCGGAGCTTGGCTGTTNTCGTCCCCGTGTTGGAGAGATTTGTGGATTTTCA
                      ____________________________________________________________
consensus             TNTTCCTGATCGGAGCTTGGCTGTTCTCGTCCCCGTGTTGGAGAGATTTGTGGATTTTCA
 
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rJMSF022A02+          TCTCTCNCTGAACATGATCTCCCCGGAGACTCNCTNTGCAGTGCTCGAGGTCATCGAATC
rJMFF036A20+          TCTCTCACTGAACATGATCTCCCCGGAGACTCACTNTGCAGTGCTCGAGGTCATCGAATC
                      ____________________________________________________________
consensus             TCTCTCACTGAACATGATCTCCCCGGAGACTCACTNTGCAGTGCTCGAGGTCATCGAATC
 
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rJMSF022A02+          GNGTAGGATCCCGNGAACTAATACCGCGATTAGCNTGGTCCCCGCGCAAGGATAACAAGC
rJMFF036A20+          GTGTAGGATCCCGTGAACTAATACCGCGATTAGCATGGTCCCCGCGCAAGGATAACAAGC
                      ____________________________________________________________
consensus             GTGTAGGATCCCGTGAACTAATACCGCGATTAGCATGGTCCCCGCGCAAGGATAACAAGC
 
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rJMSF022A02+          NCAGATCGCGNGAAACGATCCTTTTTTTTTTTCATAGTATGATAGGATCTGTATATTCTG
rJMFF036A20+          ACAGATCGCGAGAAACGATCC-TTTTTTTTTTCATAGTATGATAGGATCTGTATATTCTG
                      ____________________________________________________________
consensus             ACAGATCGCGAGAAACGATCCTTTTTTTTTTTCATAGTATGATAGGATCTGTATATTCTG
 
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rJMSF022A02+          CGTCTTCCTTTGAATCCTTCAATCTTGTAATTATGGTTATATTTTTGATTCTTTTACTTG
rJMFF036A20+          CGTCTTCCTTTGAATCCTTCAATCTTGTAATTATGGTTATATTTTTGATTCTTTTACTTG
                      ____________________________________________________________
consensus             CGTCTTCCTTTGAATCCTTCAATCTTGTAATTATGGTTATATTTTTGATTCTTTTACTTG
 
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rJMSF022A02+          TTTCTCCCCATTTCTTGTATACGAACAAACACAATCTT                      
rJMFF036A20+          TTTCTCCCCATTTCTTGTATACGAACAAACACAATCTTTCAATTCTAACACTCGTAGAAG
                      ____________________________________________________________
consensus             TTTCTCCCCATTTCTTGTATACGAACAAACACAATCTTTCAATTCTAACACTCGTAGAAG