Contig 011116:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF034M14+                        CCAAGAAAACGAGTCGATAATGAGACTGAACTATTACCCGCCGTGC
                      ____________________________________________________________
consensus                           CCAAGAAAACGAGTCGATAATGAGACTGAACTATTACCCGCCGTGC
 
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rJMFF034M14+          CGGAAACCGGAGCTGACGTTAGGCACCGGCCCCCATTGCGATCCCACGTCACTCACCATC
                      ____________________________________________________________
consensus             CGGAAACCGGAGCTGACGTTAGGCACCGGCCCCCATTGCGATCCCACGTCACTCACCATC
 
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rJMFF034M14+          CTCCACCAAGACACCGTCGGTGGGCTGCAAGTGTTTGTGGACAACCAGTGGCGCTCCATC
                      ____________________________________________________________
consensus             CTCCACCAAGACACCGTCGGTGGGCTGCAAGTGTTTGTGGACAACCAGTGGCGCTCCATC
 
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rJMSF006J11+                                              GACACTTTCATGGCACTATCGAAT
rJMFF034M14+          CCCCCCAATTTCAACGCCTTTGTCGTCAACATCGGCGACACTTTCATGGCACTATCGAAT
                      ____________________________________________________________
consensus             CCCCCCAATTTCAACGCCTTTGTCGTCAACATCGGCGACACTTTCATGGCACTATCGAAT
 
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rJMSF006J11+          GGGAGGTATAAAAGTTGTTTGCGCAGGGCAGTGGTGAACAGCAAGAGTCCCAGGAAATCA
rJMFF034M14+          GGGAGGTATAAAAGTTGTTTGCACAGGGCAGTGGTGAACAGCAAGAGTCCCAGGAAATCA
                      ____________________________________________________________
consensus             GGGAGGTATAAAAGTTGTTTGCGCAGGGCAGTGGTGAACAGCAAGAGTCCCAGGAAATCA
 
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rJMSF006J11+          CTGGCTTTCTTTCTGTGCCCAAAGAAGGATAAGGTGGTGAGGCCACCAAACGAACTGGTG
rJMFF034M14+          CTGGCTTTCTTTCTGTGCCCAAAGAAGGATAAGGTGGTGAGGCCACCAAACGAACTGGTG
                      ____________________________________________________________
consensus             CTGGCTTTCTTTCTGTGCCCAAAGAAGGATAAGGTGGTGAGGCCACCAAACGAACTGGTG
 
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rJMSF006J11+          GACTCCAGCAATCCAAGAGTATATCCAGATTTCACTTGGCCCACCCTTCTTGAATTCACC
rJMFF034M14+          GACTCCAGCAATCCAAGAGTATATCCAGATTTCACTTGGCCCACCCTTCTT-AATTCACC
                      ____________________________________________________________
consensus             GACTCCAGCAATCCAAGAGTATATCCAGATTTCACTTGGCCCACCCTTCTTGAATTCACC
 
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rJMSF006J11+          CAAAAGCATTATAGAGCAGACATGAACACCCTGCAATCCTTCTCCACTTGGCTAGCTTCA
rJMFF034M14+          CAAAAGCATTATAGAGCAGACATGAACACCCTGCAATCCTTCTCCACTTGGCTAGCTTCA
                      ____________________________________________________________
consensus             CAAAAGCATTATAGAGCAGACATGAACACCCTGCAATCCTTCTCCACTTGGCTAGCTTCA
 
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rJMSF006J11+          ACTCATCCCAACAAAACTATATAATATTCAATTCATTGATTGATTGAAGATGATGATGAA
rJMFF034M14+          ACTCATCCCAACAAAACTATATAATATTCAATTCATTGATTGATTGAAGATGATGATGAA
                      ____________________________________________________________
consensus             ACTCATCCCAACAAAACTATATAATATTCAATTCATTGATTGATTGAAGATGATGATGAA
 
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rJMSF006J11+          TTGAAGAAGAAGAAGAAGAGCCGATATACTATTATATATATGCATGCTNCTACTAGCTAT
rJMFF034M14+          TTGAAGAAGAAGAAGAAGAGCCGATATACTATTATATATATGCATGCTACTACTAGCTAT
                      ____________________________________________________________
consensus             TTGAAGAAGAAGAAGAAGAGCCGATATACTATTATATATATGCATGCTACTACTAGCTAT
 
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rJMSF006J11+          CCGATCCCTACAATTCCATGAAGATATAAATATGTGAATCAGTGCCCTTAGCTTTCCGAT
rJMFF034M14+          CCGATCCCTACAATTCCATGAAGATATAAATATGTGAATCAGTGCCCTTAGCTTTCCGAT
                      ____________________________________________________________
consensus             CCGATCCCTACAATTCCATGAAGATATAAATATGTGAATCAGTGCCCTTAGCTTTCCGAT
 
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rJMSF006J11+          CTCTCGTGGCGCCGGAAAATGATGATGACGAAAGGAAAATATATAATTAAGGGCGTTTCT
rJMFF034M14+          CTCTCGTGGCGCCGGAAAATGATGATGACGAAAGGAAAATATATAATTAAGGGCGTTTCT
                      ____________________________________________________________
consensus             CTCTCGTGGCGCCGGAAAATGATGATGACGAAAGGAAAATATATAATTAAGGGCGTTTCT
 
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rJMSF006J11+          CATTTCAAAA                                                  
rJMFF034M14+          CATTTCAAAACTTGTACTGTGGAACCGAAATATAGAGGGAAAATTTTTATATATATAATA
                      ____________________________________________________________
consensus             CATTTCAAAACTTGTACTGTGGAACCGAAATATAGAGGGAAAATTTTTATATATATAATA