| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006I20 | Sequence | 552 | 011112 (7) | ref|XP_009618777.1| | 6e-23 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloropla | 761 | 011112 (7) | ref|XP_004240889.1| | 174 | PREDICTED: uncharacterized protein LOC101263617 [Solanum lycopersicum] |
| JMFF033O12 | Sequence | 752 | 011112 (7) | ref|XP_004240889.1| | 174 | PREDICTED: uncharacterized protein LOC101263617 [Solanum lycopersicum] | |||||
| JMFF035D18 | Sequence | 576 | 011112 (7) | ref|XP_009618777.1| | 9e-43 | PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloropla | 702 | 011112 (7) | ref|XP_004240889.1| | 174 | PREDICTED: uncharacterized protein LOC101263617 [Solanum lycopersicum] |
| JMSF007D22 | Sequence | 326 | 011112 (7) | ref|XP_009785832.1| | 1e-14 | PREDICTED: uncharacterized protein LOC104234041 isoform X3 [Nicotiana sylvestri | 793 | 011112 (7) | ref|XP_004240889.1| | 196 | PREDICTED: uncharacterized protein LOC101263617 [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
JMFF006I20- GAATCTATA
____________________________________________________________
consensus GAATCTATA
. : . : . : . : . : . :
JMFF006I20- GCGAGACGAGACGAGCGCACGTTAGCAGGGAGCCAAGGGACAGCATACGGTTAGGAGAGT
____________________________________________________________
consensus GCGAGACGAGACGAGCGCACGTTAGCAGGGAGCCAAGGGACAGCATACGGTTAGGAGAGT
. : . : . : . : . : . :
JMFF006I20- GGGTGAAGAAAGAAATGAGAGTGACGGACATTTCAAAGCAGTGCTTCAGATTCTCTTTGT
____________________________________________________________
consensus GGGTGAAGAAAGAAATGAGAGTGACGGACATTTCAAAGCAGTGCTTCAGATTCTCTTTGT
. : . : . : . : . : . :
JMFF006I20- TTTCACAGCTATCTTGCGTGCTATAAAGTTCCTTTCCATATCTCTTCTCTAAACCTCATT
____________________________________________________________
consensus TTTCACAGCTATCTTGCGTGCTATAAAGTTCCTTTCCATATCTCTTCTCTAAACCTCATT
. : . : . : . : . : . :
JMFF006I20- TATTCCTAAGTCCTAACTTCCCGGAGAGATCTGCATTTCTTTCTCCGCCGATGGAGTCAG
JMSF007D22- AAGTCCTAACTTCCCGGAGAGATCTGCATTTCTTTCTCCGCCGATGGAGTCAG
JMFF035D18- AAGTCCTAACTTCCCGGAGAGATCTGCATTTCTTTCTCCGCCGATGGAGTCAG
____________________________________________________________
consensus TATTCCTAAGTCCTAACTTCCCGGAGAGATCTGCATTTCTTTCTCCGCCGATGGAGTCAG
. : . : . : . : . : . :
JMFF006I20- CCGCCATTCTCCGCTCCCCCCACCATTGTGTTGGTAATTCTCACCTGAAGTCGATATTGG
JMSF007D22- CCGCCATTCTCCGCTCCCCCCACCATTGTGTTGGTAATTCTCACCTGAAGTCGATATTGG
JMFF035D18- CCGCCATTCTCCGCTCCCCCCACCATTGTGTTGGTAATTCTCACCTGAAGTCGATATTGG
____________________________________________________________
consensus CCGCCATTCTCCGCTCCCCCCACCATTGTGTTGGTAATTCTCACCTGAAGTCGATATTGG
. : . : . : . : . : . :
JMFF006I20- ATATGGCTGGTGTGGTTCCCATGAATAGTGCTGCATTCTCCAACAGAAGTGGCTTGACAT
JMSF007D22- ATATGGCTGGTGTGGTTCCCATGAATAGTGCTGCATTCTCCAACAGAAGTGGCTTGACAT
JMFF035D18- ATATGGCTGGTGTGGTTCCCATGAATAGTGCTGCATTCTCCAACAGAAGTGGCTTGACAT
____________________________________________________________
consensus ATATGGCTGGTGTGGTTCCCATGAATAGTGCTGCATTCTCCAACAGAAGTGGCTTGACAT
. : . : . : . : . : . :
JMFF006I20- TTGGTGGGAAGCTCATTTGTTCGCGAAACAGGCACAACAGATTAGTAATGTCATCTGCAA
JMSF007D22- TTGGTGGGAAGCTCATTTGTTCGCGAAACAGGCACAACAGATTAGTAATGTCATCTGCAA
JMFF035D18- TTGGTGGGAAGCTCATTTGTTCGCGAAACAGGCACAACAGATTAGTAATGTCATCTGCAA
____________________________________________________________
consensus TTGGTGGGAAGCTCATTTGTTCGCGAAACAGGCACAACAGATTAGTAATGTCATCTGCAA
. : . : . : . : . : . :
JMFF006I20- AGACACCAGAAACTGTACCAGCAAATTTGAATGGAGCAGCTGTTCTGAGTCATAGCCAAC
JMSF007D22- AGACACCAGAAACTGTACCAGCAAATTTGAATG
JMFF035D18- AGACACCAGAAACTGTACCAGCAAATTTGAATGGAGCAGCTGTTCTGAGTCATAGCCAAC
____________________________________________________________
consensus AGACACCAGAAACTGTACCAGCAAATTTGAATGGAGCAGCTGTTCTGAGTCATAGCCAAC
. : . : . : . : . : . :
JMFF006I20- AAACTGTGCCAGATGAGAAGAATTCCCTGACACAAGCTATATTCCCTGATGGTTTTGAGG
JMFF035D18- AAACTGTGCCAGATGAGAAGAATTCCCTGACACAAGCTATATTCCCTGATGGTTTTGAGG
____________________________________________________________
consensus AAACTGTGCCAGATGAGAAGAATTCCCTGACACAAGCTATATTCCCTGATGGTTTTGAGG
. : . : . : . : . : . :
JMFF006I20- CCC
JMFF035D18- CCCTAATCACAGAAGTCTGTGATGACACAGAAATTGCTGAGTTGAAACTTAAGGCTGGGG
____________________________________________________________
consensus CCCTAATCACAGAAGTCTGTGATGACACAGAAATTGCTGAGTTGAAACTTAAGGCTGGGG
. : . : . : . : . : . :
JMFF035D18- ATTTTGAGATGCACCTATTGCGGAAAATTGAGGCTACAGCAGTCCCAGCGCCAGTTGTCT
____________________________________________________________
consensus ATTTTGAGATGCACCTATTGCGGAAAATTGAGGCTACAGCAGTCCCAGCGCCAGTTGTCT
. : . : . : . : . : . :
JMFF035D18- CTCCCACACCACCACCTAGTCCAAGTCAACCAGTGGTTGACTCATTGCCTGCCGCTTCTT
rJMFF006I20+ GTCCAAGTCAACCAGTGGTTGACTCATTGCCTGCCGCTTCTT
rJMFF033O12+ ACCAGTGGTTGACTCATTGCCTGCCGCTTCTT
____________________________________________________________
consensus CTCCCACACCACCACCTAGTCCAAGTCAACCAGTGGTTGACTCATTGCCTGCCGCTTCTT
. : . : . : . : . : . :
JMFF035D18- CAGCATCTCCATCAAAACCATCTGAAAAATCTAGCCCATTT
rJMFF035D18+ CCCATTTATAAATGTCTCTTCCGAGA
rJMSF007D22+ CCCATTTATAAATGTCTCTTCCGAGA
rJMFF006I20+ CAGCATCTCCATCAAAACCATCTGAAAAATCTAGCCCATTTATAAATGTCTCTTCCGAGA
rJMFF033O12+ CAGCATCTCCATCAAAACCATCTGAAAAATCTAGCCCATTTATAAATGTCTCTTCCGAGA
____________________________________________________________
consensus CAGCATCTCCATCAAAACCATCTGAAAAATCTAGCCCATTTATAAATGTCTCTTCCGAGA
. : . : . : . : . : . :
rJMFF035D18+ AGTCAACAAAGTTAGCTGCACTAGAGGCTTCCGGATCTAGTGGTTATGTCCTAGTATTAT
rJMSF007D22+ AGTCAACAAAGTTAGCTGCACTAGAGGCTTCCGGATCTAGTGGTTATGTCCTAGTATTAT
rJMFF006I20+ AGTCAACAAAGTTAGCTGCACTAGAGGCTTCCGGATCTAGTGGTTATGTCCTAGTATTAT
rJMFF033O12+ AGTCAACAAAGTTAGCTGCACTAGAGGCTTCCGGATCTAGTGGTTATGTCCTAGTATTAT
____________________________________________________________
consensus AGTCAACAAAGTTAGCTGCACTAGAGGCTTCCGGATCTAGTGGTTATGTCCTAGTATTAT
. : . : . : . : . : . :
rJMFF035D18+ CTCAAGCTGTTGGCTCGTTTCGAAGGGCTAGAACTTCAAAGGGAAAGAAGCTACCACTTG
rJMSF007D22+ CTCAAGCTGTTGGCTCGTTTCGAAGGGCTAGAACTTCAAAGGGAAAGAAGCTACCACTTG
rJMFF006I20+ CTCAAGCTGTTGGCTCGTTTCGAAGGGCTAGAACTTCAAAGGGAAAGAAGCTACCACTTG
rJMFF033O12+ CTCAAGCTGTTGGCTCGTTTCGAAGGGCTAGAACTTCAAAGGGAAAGAAGCTACCACTTG
____________________________________________________________
consensus CTCAAGCTGTTGGCTCGTTTCGAAGGGCTAGAACTTCAAAGGGAAAGAAGCTACCACTTG
. : . : . : . : . : . :
rJMFF035D18+ CTTGCAAGGAGGGCGATATTATAAAAGCAGGACAAACTATTGGCTTTCTGGATCAGTTTG
rJMSF007D22+ CTTGCAAGGAGGGCGATATTATAAAAGCAGGACAAACTATTGGCTTTCTGGATCAGTTTG
rJMFF006I20+ CTTGCAAGGAGGGCGATATTATAAAAGCAGGACAAACTATTGGCTTTCTGGATCAGTTTG
rJMFF033O12+ CTTGCAAGGAGGGCGATATTATAAAAGCAGGACAAACTATTGGCTTTCTGGATCAGTTTG
____________________________________________________________
consensus CTTGCAAGGAGGGCGATATTATAAAAGCAGGACAAACTATTGGCTTTCTGGATCAGTTTG
. : . : . : . : . : . :
rJMFF035D18+ GTTCTGAGGTTCCAGTCAAAGCAGATGTGGCTGGAAAAGTCTTGAAGATCCTCTATGATG
rJMSF007D22+ GTTCTGAGGTTCCAGTCAAAGCAGATGTGGCTGGAAAAGTCTTGAAGATCCTCTATGATG
rJMFF006I20+ GTTCTGAGGTTCCAGTCAAAGCAGATGTGGCTGGAAAAGTCTTGAAGATCCTCTATGATG
rJMFF033O12+ GTTCTGAGGTTCCAGTCAAAGCAGATGTGGCTGGAAAAGTCTTGAAGATCCTCTATGATG
____________________________________________________________
consensus GTTCTGAGGTTCCAGTCAAAGCAGATGTGGCTGGAAAAGTCTTGAAGATCCTCTATGATG
. : . : . : . : . : . :
rJMFF035D18+ ATGGAGAAGCTGTTGGCTATGGAGATCCGCTTGTTGCTGTGCTGCCATAGTTTCATGGTA
rJMSF007D22+ ATGGAGAAGCTGTTGGCTATGGAGATCCGCTTGTTGCTGTGCTGCCATAGTTTCATGGTA
rJMFF006I20+ ATGGAGAAGCTGTTGGCTATGGAGATCCGCTTGTTGCTGTGCTGCCATAGTTTCATGGTA
rJMFF033O12+ ATGGAGAAGCTGTTGGCTATGGAGATCCGCTTGTTGCTGTGCTGCCATAGTTTCATGGTA
____________________________________________________________
consensus ATGGAGAAGCTGTTGGCTATGGAGATCCGCTTGTTGCTGTGCTGCCATAGTTTCATGGTA
. : . : . : . : . : . :
rJMFF035D18+ TGAACCGAAGATTTTTGTGGCAATACTATGTTGTGTTGGTTCACATTTTAAGAGATCAAG
rJMSF007D22+ TGAACCGAAGATTTTTGTGGCAATACTATGTTGTGTTGGTTCACATTTTAAGAGATCAAG
rJMFF006I20+ TGAACCGAAGATTTTTGTGGCAATACTATGTTGTGTTGGTTCACATTTTAAGAGATCAAG
rJMFF033O12+ TGAACCGAAGATTTTTGTGGCAATACTATGTTGTGTTGGTTCACATTTTAAGAGATCAAG
____________________________________________________________
consensus TGAACCGAAGATTTTTGTGGCAATACTATGTTGTGTTGGTTCACATTTTAAGAGATCAAG
. : . : . : . : . : . :
rJMFF035D18+ CAGACGAGTTCTTAGTTTTCTAGTAATTCTCCGCTATTCCAAGTTTGCATCATAATCTTG
rJMSF007D22+ CAGACGAGTTCTTAGTTTTCTAGTAATTCTCCGCTATTCCAAGTTTGCATCATAATCTTG
rJMFF006I20+ CAGACGAGTTCTTAGTTTTCTAGTAATTCTCCGCTATTCCAAGTTTGCATCATAATCTTG
rJMFF033O12+ CAGACGAGTTCTTAGTTTTCTAGTAATTCTCCGCTATTCCAAGTTTGCATCATAATCTTG
____________________________________________________________
consensus CAGACGAGTTCTTAGTTTTCTAGTAATTCTCCGCTATTCCAAGTTTGCATCATAATCTTG
. : . : . : . : . : . :
rJMFF035D18+ ATTTGGTAGAATAGGGTATAGATGGGTGGTGTTTACTGTTGTTACTTTTTGAGAGCTAAG
rJMSF007D22+ ATTTGGTAGAATAGGGTATAGATGGGTGGTGTTTACTGTTGTTACTTTTTGAGAGCTAAG
rJMFF006I20+ ATTTGGTAGAATAGGGTATAGATGGGTGGTGTTTACTGTTGTTACTTTTTGAGAGCTAAG
rJMFF033O12+ ATTTGGTAGAATAGGGTATAGATGGGTGGTGTTTACTGTTGTTACTTTTTGAGAGCTAAG
____________________________________________________________
consensus ATTTGGTAGAATAGGGTATAGATGGGTGGTGTTTACTGTTGTTACTTTTTGAGAGCTAAG
. : . : . : . : . : . :
rJMFF035D18+ TTTGCTATTGATCCAGAATAAGTGATTTTCCACTATTTGGCATGATGCTATGGATCCTCA
rJMSF007D22+ TTTGCTATTGATCCAGAATAAGTGATTTTCCACTATTTGGCATGATGCTATGGATCCTCA
rJMFF006I20+ TTTGCTATTGATCCAGAATAAGTGATTTTCCACTATTTGGCATGATGCTATGGATCCTCA
rJMFF033O12+ TTTGCTATTGATCCAGAATAAGTGATTTTCCACTATTTGGCATGATGCTATGGATCCTCA
____________________________________________________________
consensus TTTGCTATTGATCCAGAATAAGTGATTTTCCACTATTTGGCATGATGCTATGGATCCTCA
. : . : . : . : . : . :
rJMFF035D18+ ATGAACCTTTTCTACAGATGTGGCGAACATTAACGTGAATATTA
rJMSF007D22+ ATGAACCTTTTCTACAGATGTGGCGAAC
rJMFF006I20+ ATGAACCTTTTCTACAGATGTGGCGAACATTAACGTGAATATTAATGAACATTTTTTTGT
rJMFF033O12+ ATGAACCTTTTCTACAGATGTGGCGAACATTAACGTGAATATTAATGAACATTTTTTTGT
____________________________________________________________
consensus ATGAACCTTTTCTACAGATGTGGCGAACATTAACGTGAATATTAATGAACATTTTTTTGT
. : . : . : . : . : . :
rJMFF006I20+ TTAGAACAGTGAAAAACATCCATTACTGTATGGGTATTCATTATAAATATTACGAACAC
rJMFF033O12+ TTAGAACAGTGAAAAACATCCATTACTGTATGGGTATTCATTATAAATATTACGAACACT
____________________________________________________________
consensus TTAGAACAGTGAAAAACATCCATTACTGTATGGGTATTCATTATAAATATTACGAACACT