Contig 011107:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006O04Sequence621005914 (4)gb|KJB52135.1|9e-97hypothetical protein B456_008G247500 [Gossypium raimondii]785011107 (4)ref|XP_009780084.1|6e-133PREDICTED: signal peptide peptidase-like 2 [Nicotiana sylvestris]
JMFF009N22Sequence544005914 (4)emb|CDP12033.1|5e-71unnamed protein product [Coffea canephora]251011107 (4)gb|EYU38342.1|7e-12hypothetical protein MIMGU_mgv1a004184mg [Erythranthe guttata]
JMFF032J02Sequence528005914 (4)emb|CDP12033.1|1e-66unnamed protein product [Coffea canephora]688011107 (4)ref|XP_009780084.1|1e-113PREDICTED: signal peptide peptidase-like 2 [Nicotiana sylvestris]
JMFF033P07Sequence569005914 (4)emb|CDP12033.1|5e-77unnamed protein product [Coffea canephora]788011107 (4)ref|XP_009780084.1|6e-133PREDICTED: signal peptide peptidase-like 2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF006O04+                                                              TTCTGCAT
rJMFF033P07+                                                             GTTCTGCAT
                      ____________________________________________________________
consensus                                                                GTTCTGCAT
 
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rJMFF006O04+          AGCTATTGCAGTNNTATGGGCAGTCTACAGAACATCATCATTTGCATGGATAGGTCAAGA
rJMFF033P07+          AGCTATTGCAGTTTTATGGGTAGTCTACAGAACATCATCATTTGCATGGATAGGTCAAGA
                      ____________________________________________________________
consensus             AGCTATTGCAGTTTTATGGGTAGTCTACAGAACATCATCATTTGCATGGATAGGTCAAGA
 
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rJMFF006O04+          TGTACTTGGCATTGCGCTTATTATCACTGTTCTTCAGATTGTACGGATACNTAATCTTAA
rJMFF033P07+          TGTACTTGGCATTGCGCTTATTATCACTGTTCTTCAGATTGTACGGATACCTAATCTTAA
rJMFF032J02+                                          TTCAGATTGTACGGATACCTAATCTTAA
                      ____________________________________________________________
consensus             TGTACTTGGCATTGCGCTTATTATCACTGTTCTTCAGATTGTACGGATACCTAATCTTAA
 
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rJMFF006O04+          GGTGGGAACAGTACTACTGGGTTGCGCCTTCTTGTACGACATATTTTGGGTGTTTGCTTC
rJMFF033P07+          GGTGGGAACAGTACTACTGGGTTGCGCCTTCTTGTACGACATATTTTGGGTGTTTGCTTC
rJMFF032J02+          GGTGGGAACAGTACTACTGGGTTGCGCCTTCTTGTACGACATATTTTGGGTGTTTGCTTC
                      ____________________________________________________________
consensus             GGTGGGAACAGTACTACTGGGTTGCGCCTTCTTGTACGACATATTTTGGGTGTTTGCTTC
 
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rJMFF006O04+          CAAGAAGCTGTTCCATGAAAGTGTGATGATTGTGGTAGCTCGTGGTGATAGAAGCGGCGA
rJMFF033P07+          CAAGAAGCTGTTCCATGAAAGTGTGATGATTGTGGTAGCTCGTGGTGATAGAAGCGGCGA
rJMFF032J02+          CAAGAAGCTGTTCCATGAAAGTGTGATGATTGTGGTAGCTCGTGGTGATAGAAGCGGCGA
                      ____________________________________________________________
consensus             CAAGAAGCTGTTCCATGAAAGTGTGATGATTGTGGTAGCTCGTGGTGATAGAAGCGGCGA
 
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rJMFF006O04+          GGATGGTATTCCTATGCTACTGAAGATTCCACGCCTATTTGATCCCTGGGGTGGTTATAG
rJMFF033P07+          GGATGGTATTCCTATGCTACTGAAGATTCCACGCNTATTTGATCCCTGGGGTGGTTATAG
rJMFF032J02+          GGATGGTATTCCTATGCTACTGAAGATTCCACGCCTATTTGATCCCTGGGGTGGTTATAG
                      ____________________________________________________________
consensus             GGATGGTATTCCTATGCTACTGAAGATTCCACGCCTATTTGATCCCTGGGGTGGTTATAG
 
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rJMFF006O04+          CATCATAGGCTTTGGCGACATCCTTNTACCAGGACTGCTGGTTTCATTTTCACTGAGGTA
rJMFF033P07+          CATCATAGGCTTTGGNGACATCCTTCTACCAGGACTGNTGGTTTCATTTTCACTGAGGTA
rJMFF032J02+          CATCATAGGCTTTGGCGACATCCTTCTACCAGGACTGCTGGTTTCATTTTCACTGAGGTA
                      ____________________________________________________________
consensus             CATCATAGGCTTTGGCGACATCCTTCTACCAGGACTGCTGGTTTCATTTTCACTGAGGTA
 
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rJMFF006O04+          TGATTGGCTTGCAAAGAAGAATCTCCGAGCTGGTTACTTTCTGTGGGCAATGCTTGCTTA
rJMFF033P07+          TGATTGGCTTGCAAAGAAGAATCTCCGAGCTGGTTACTTTCTGTGGGCAATGCTTGCTTA
rJMFF032J02+          TGATTGGCTTGCAAAGAAGAATCTCCGAGCTGGTTACTTTCTGTGGGCAATGCTTGCTTA
                      ____________________________________________________________
consensus             TGATTGGCTTGCAAAGAAGAATCTCCGAGCTGGTTACTTTCTGTGGGCAATGCTTGCTTA
 
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rJMFF006O04+          TGGATTAGGCCTTCTCGTTACATATGTAGCGTTGAACCTTATGGATGGCCATGGCCAACC
rJMFF033P07+          TGGATTAGGCCTTCTCGTTACATATGTAGCGTTGAACCTTATGGATGGCCATGGCCAACC
rJMFF032J02+          TGGATTAGGCCTTCTCGTTACATATGTAGCGTTGAACCTTATGGATGGCCATGGCCAACC
                      ____________________________________________________________
consensus             TGGATTAGGCCTTCTCGTTACATATGTAGCGTTGAACCTTATGGATGGCCATGGCCAACC
 
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rJMFF006O04+          CGCACTTCTTTACATCGTTCCATTTACCCTCGGGACGTTTCTGGCATTGGGTAGAAAGCG
rJMFF009N22+                                                    GGCATTGGGTAGAAAGCG
rJMFF033P07+          CGCACTTCTTTACATCGTTCCATTTACCCTCGGGACGTTTCTGGCATTGGGTAGAAAGCG
rJMFF032J02+          CGCACTTCTTTACATCGTTCCATTTACCCTCGGGACGTTTCTGGCATTGGGTAGAAAGCG
                      ____________________________________________________________
consensus             CGCACTTCTTTACATCGTTCCATTTACCCTCGGGACGTTTCTGGCATTGGGTAGAAAGCG
 
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rJMFF006O04+          AGGAGACCTTAAGATTCTGTGGACGAGGGGAGAACCGGAAAGGGTGTGCCCGCACATACG
rJMFF009N22+          AGGAGNCCTTAAGATTCTGTGGACGAGGGGAGAACCGGAAAGGGTGTGCCCGCACATACG
rJMFF033P07+          AGGAGACCTTAAGATTCTGTGGACGAGGGGAGAACCGGAAAGGGTGTGCCCGCACATACG
rJMFF032J02+          AGGAGACCTTAAGATTCTGTGGACGAGGGGAGAACCGGAAAGGGTGTGCCCGCACATACG
                      ____________________________________________________________
consensus             AGGAGACCTTAAGATTCTGTGGACGAGGGGAGAACCGGAAAGGGTGTGCCCGCACATACG
 
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rJMFF006O04+          CCTCGAATCAACCCACGAATCGGATGAAGAAAAATGAAGTGTATAGCTCTTAATAATTAG
rJMFF009N22+          CCTCGAATCAACCCACGAATCGGATGAAGAAAAATGAAGTGTATAGCTCTTAATAATTAG
rJMFF033P07+          CCTCGAATCAACCCACGAATCGGATGAAGAAAAATGAAGTGTATAGCTCTTAATAATTAG
rJMFF032J02+          CCTCGAATCAACCCACGAATCGGATGAAGAAAAATGAAGTGTATAGCTCTTAATAATTAG
                      ____________________________________________________________
consensus             CCTCGAATCAACCCACGAATCGGATGAAGAAAAATGAAGTGTATAGCTCTTAATAATTAG
 
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rJMFF006O04+          CTGNTAAAATGCATATGTTATTGCCACGAAGAAATGTTATGGTAAACAGGAACCAGCTGT
rJMFF009N22+          CTGCTAAAATGCATATGTTATTGCCACGAAGAAATGTTATGGTAAACAGGAACCAGCTGT
rJMFF033P07+          CTGCTAAAATGCATATGTTATTGCCACGAAGAAATGTTATGGTAAACAGGAACCAGCTGT
rJMFF032J02+          CTGCTAAAATGCATATGTTATTGCCACGAAGAAATGTTATGGTAAACAGGAACCAGCTGT
                      ____________________________________________________________
consensus             CTGCTAAAATGCATATGTTATTGCCACGAAGAAATGTTATGGTAAACAGGAACCAGCTGT
 
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rJMFF006O04+          TTATTGTCTGGNTAAATCTGCAAATGATATGAACACTTATATTCAAGTTAA         
rJMFF009N22+          TTATTGTCTGGCTAAATCTGCAAATGATATGAACACTTATATTCAAGTTAA         
rJMFF033P07+          TTATTGTCTGGCTAAATCTGCAAATGATATGAACACTTATATTCAAGTTAA         
rJMFF032J02+          TTATTGTCTGGCTAAATCTGCAAATGATATGAACACTTATATTCAAGTTAATGGACAATT
                      ____________________________________________________________
consensus             TTATTGTCTGGCTAAATCTGCAAATGATATGAACACTTATATTCAAGTTAATGGACAATT