Contig 011104:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF032C11+                                                             TTCAAAGNT
                      ____________________________________________________________
consensus                                                                TTCAAAGNT
 
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rJMFF027L17+                                TTTCAAGTTGAGCCAATCAATTACGGGTCTGTTAGAAA
rJMFF032C11+          CGTTTCTCTTCAGAATTCAAGCTTTCAAGTTGAGCCAATCAATTACGGGTCTGTTAGAAA
                      ____________________________________________________________
consensus             CGTTTCTCTTCAGAATTCAAGCTTTCAAGTTGAGCCAATCAATTACGGGTCTGTTAGAAA
 
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rJMFF027L17+          GCAATGGTGTGATAAGAGGACCATATTCCCTAAAGGATTTCAAAGCCGTGTAAAGTTTTT
rJMFF032C11+          GCAATGGTGTGATAAGAGGACCATATTCCNTAAAGGATTTCAAAGCCGTGTAAAGTTTTT
                      ____________________________________________________________
consensus             GCAATGGTGTGATAAGAGGACCATATTCCCTAAAGGATTTCAAAGCCGTGTAAAGTTTTT
 
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rJMFF027L17+          CAGTGTTTTTGATCCAACGAAATACACCAGTTATATATCTGAGGTTTGTGACGGTGGACT
rJMFF032C11+          CAGTGTTTTTGATCCAACGAAATACACCAGTTATATATCTGAGGTTTGTGACGGTGGACT
                      ____________________________________________________________
consensus             CAGTGTTTTTGATCCAACGAAATACACCAGTTATATATCTGAGGTTTGTGACGGTGGACT
 
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rJMFF027L17+          TCTTGGACCTCTATTTAAGGTGACTTTAGAACACTGTTCTACTATAAGCTATACATGTTC
rJMFF032C11+          TCTTGGACCTCTATTTAAGGTGACTTTAGAACACTGTTCTACTATAAGCTATACATGTTC
                      ____________________________________________________________
consensus             TCTTGGACCTCTATTTAAGGTGACTTTAGAACACTGTTCTACTATAAGCTATACATGTTC
 
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rJMFF027L17+          TTCAGCTGAGAAATGCTGGGAAATGATGGTGCAGAGACTGAACAACGAAATAATGAGGCA
rJMFF032C11+          TTCAGCTGAGAAATGCTGGGAAATGATGGTGCAGAGACTGAACAACGAAATAATGAGGCA
                      ____________________________________________________________
consensus             TTCAGCTGAGAAATGCTGGGAAATGATGGTGCAGAGACTGAACAACGAAATAATGAGGCA
 
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rJMFF027L17+          AACCGTTTTAGGGAAGCAAGGACTCCCCCCGTTGCAAACTGGAGATAGAATTAACGGGCT
rJMFF032C11+          AACCGTTTTAGGGAAGCAAGGACTCCCCCCGTTGCAAACTGGAGATAGAATTAACGGGCT
                      ____________________________________________________________
consensus             AACCGTTTTAGGGAAGCAAGGACTCCCCCCGTTGCAAACTGGAGATAGAATTAACGGGCT
 
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rJMFF027L17+          TGAAATGTTTGGGTTCTTATCCCCGCATATCATTAAGGAGATTGAATCGCTTGATCCTGA
rJMFF032C11+          TGAAATGTTTGGGTTCTTATCCCCGCATATCATTAAGGAGATTGAATCGCTTGATCCTGA
                      ____________________________________________________________
consensus             TGAAATGTTTGGGTTCTTATCCCCGCATATCATTAAGGAGATTGAATCGCTTGATCCTGA
 
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rJMFF027L17+          CCATGAATGCATGGAGTACTGGAGTCAGAAGCTGCAGCCTCCGGGATTTAGCCAGCACGA
rJMFF032C11+          CCATGAATGCATGGAGTACTGGAGTCAGAAGCTGCAGCCTCCGGGATTTAGCCAGCACGA
                      ____________________________________________________________
consensus             CCATGAATGCATGGAGTACTGGAGTCAGAAGCTGCAGCCTCCGGGATTTAGCCAGCACGA
 
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rJMFF027L17+          TGTCAAACCAAGCTCAAATGTCGAGGAAAGAAGCCAAGATTCTGGAGTCGATTTGGCCGC
rJMFF032C11+          TGTCAAACCAAGCTCAAATGTCGAGGAAAGAAGCCAAGATTCTGGAGTCGATTTGGCCGC
                      ____________________________________________________________
consensus             TGTCAAACCAAGCTCAAATGTCGAGGAAAGAAGCCAAGATTCTGGAGTCGATTTGGCCGC
 
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rJMFF027L17+          TAAACGAATACTAGGTAGCAATAGTCATTTATCTGATGACAACGTGAAAACTGCGCTGCA
rJMFF032C11+          TAAACGAATACTAGGTAGCAATAGTCATTTATCTGATGACAACGTGAAAACTGCGCTGCA
                      ____________________________________________________________
consensus             TAAACGAATACTAGGTAGCAATAGTCATTTATCTGATGACAACGTGAAAACTGCGCTGCA
 
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rJMFF027L17+          TAGATTTTTCAGTAAAGCAAATCCACAAGAGTTGGAGATGATGCATAGAGTATTGTGCAG
rJMFF032C11+          TAGATTTTTCAGTAAAGCAAATCCACAAGAGTTGGAGATGATGCATAGAGTATTGTGCAG
                      ____________________________________________________________
consensus             TAGATTTTTCAGTAAAGCAAATCCACAAGAGTTGGAGATGATGCATAGAGTATTGTGCAG
 
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rJMFF027L17+          CGGATCAAGTAGCCCGGACTGGAGAACAGCAGTTGCTGTCCTGGATGAGATGCAGAAGAA
rJMFF032C11+          CGGATCAAGTAGCCCGGACTGGAGAACAGCAGTTGCTGTCCTGGATGAGATGCAGAAGAA
                      ____________________________________________________________
consensus             CGGATCAAGTAGCCCGGACTGGAGAACAGCAGTTGCTGTCCTGGATGAGATGCAGAAGAA
 
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rJMFF027L17+          AGGTGAAACAAAACATAGGGACTAATCATTTCTTTTGTTCTTAAGGTTCATATCTTCAGC
rJMFF032C11+          AGGTGAAACAAAACATAGGGACTAATCATTTCTTTTGTTCTTAAGGTTCATATCTTCAGC
                      ____________________________________________________________
consensus             AGGTGAAACAAAACATAGGGACTAATCATTTCTTTTGTTCTTAAGGTTCATATCTTCAGC