| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF031P14 | Sequence | 645 | 006561 (4) | ref|XP_004245533.1| | 4e-95 | PREDICTED: probable GABA transporter 2 [Solanum lycopersicum] | 757 | 011103 (3) | gb|AHF58601.1| | 8e-92 | proline transporter 4 [Chrysanthemum lavandulifolium] |
| JMSF026A12 | Sequence | 689 | 006561 (4) | emb|CDP12134.1| | 1e-99 | unnamed protein product [Coffea canephora] | 741 | 011103 (3) | gb|AHF58601.1| | 3e-99 | proline transporter 4 [Chrysanthemum lavandulifolium] |
| JMSF028G14 | Sequence | 689 | 006561 (4) | emb|CDP12134.1| | 1e-99 | unnamed protein product [Coffea canephora] | 762 | 011103 (3) | ref|XP_009599656.1| | 5e-131 | PREDICTED: probable GABA transporter 2 isoform X3 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF028G14+ GCTGCCATTTTGGAAATGGTATTCTGCCTGAAATACAG
____________________________________________________________
consensus GCTGCCATTTTGGAAATGGTATTCTGCCTGAAATACAG
. : . : . : . : . : . :
rJMSF028G14+ GCAACTCTTGCTCCACCAGTAACANGAAAGATGGTGAAAGGGCTCACAATGTGTTACTCT
____________________________________________________________
consensus GCAACTCTTGCTCCACCAGTAACANGAAAGATGGTGAAAGGGCTCACAATGTGTTACTCT
. : . : . : . : . : . :
rJMSF028G14+ GTGATTCTTGTCACCTTCTATTCTGCTGCGGTGTCTGGATATTGGGCATTTGGAAACAAG
rJMSF026A12+ GGAAACAAG
____________________________________________________________
consensus GTGATTCTTGTCACCTTCTATTCTGCTGCGGTGTCTGGATATTGGGCATTTGGAAACAAG
. : . : . : . : . : . :
rJMSF028G14+ TCCAATTCAAACATCCTCAAGAGCTTAATGCCAGATGATGGACCTTCATTGGCTCCAACA
rJMSF026A12+ TCCAATTCAAACATCCTCAAGAGCTTAATGCCAGATGATGGACCTTCATTGGCTCCAACA
rJMFF031P14+ CTTAATGCCAGATGATGGACCTTCATTGGCTCCAACA
____________________________________________________________
consensus TCCAATTCAAACATCCTCAAGAGCTTAATGCCAGATGATGGACCTTCATTGGCTCCAACA
. : . : . : . : . : . :
rJMSF028G14+ TGGGTATTAGGTCTTGGGGTTATGTTTGTTCTTCTTCAGCTCTTCGCTATTGCCCTGGTG
rJMSF026A12+ TGGGTATTAGGTCTTGGGGTTATGTTTGTTCTTCTTCAGCTCTTCGCTATTGCCCTGGTG
rJMFF031P14+ TGGGTATTAGGTCTTGGGGTTATGTTTGTTCTTCTTCAGCTCTTCGCTATTGCCCTGGTG
____________________________________________________________
consensus TGGGTATTAGGTCTTGGGGTTATGTTTGTTCTTCTTCAGCTCTTCGCTATTGCCCTGGTG
. : . : . : . : . : . :
rJMSF028G14+ TATTCTCAGGTGGCCTATGAAATAATGGAAACAAAATCTGCAGATGTGAACAAAGGGATG
rJMSF026A12+ TATTCTCAGGTGGCCTATGAAATAATGGAAACAAAATCTGCAGATGTGAACAAAGGGATG
rJMFF031P14+ TATTCTCAGGTGGCCTATGAAATAATGGAAACAAAATCTGCAGATGTGAACAAAGGGATG
____________________________________________________________
consensus TATTCTCAGGTGGCCTATGAAATAATGGAAACAAAATCTGCAGATGTGAACAAAGGGATG
. : . : . : . : . : . :
rJMSF028G14+ TTCTCTAAGAGAAACTTAATTCCGAGGATAATTCTCCGGTCACTGTACATGGCACTGTGT
rJMSF026A12+ TTCTCTAAGAGAAACTTAATTCCGAGGATAATTCTCCGGTCACTGTACATGGCACTGTGT
rJMFF031P14+ TTCTCTAAGAGAAACTTAATTCCGAGGATAATTCTCCGGTCACTGTACATGGCACTGTGT
____________________________________________________________
consensus TTCTCTAAGAGAAACTTAATTCCGAGGATAATTCTCCGGTCACTGTACATGGCACTGTGT
. : . : . : . : . : . :
rJMSF028G14+ GGGTTTTTTGCAGCTATGTTACCATTCTTTGGGGACATCAATGGCGTAGTTGGAGCAATT
rJMSF026A12+ GGGTTTTTTGCAGCTATGTTACCATTCTTTGGGGACATCAATGGCGTAGTTGGAGCAATT
rJMFF031P14+ GGGTTTTTTGCAGCTATGTTACCATTCTTTGGGGACATCAATGGCGTAGTTGGAGCAATT
____________________________________________________________
consensus GGGTTTTTTGCAGCTATGTTACCATTCTTTGGGGACATCAATGGCGTAGTTGGAGCAATT
. : . : . : . : . : . :
rJMSF028G14+ GGGTTCATCCCTCTGGATTTCATTCTCCCAATGCTCCTCTACAACATGACTTTCAAACCC
rJMSF026A12+ GGGTTCATCCCTCTGGATTTCATTCTCCCAATGCTCCTCTACAACATGACTTTCAAACCC
rJMFF031P14+ GGGTTCATCCCTCTGGATTTCATTCTCCCAATGCTCCTCTACAACATGACTTTCAAACCC
____________________________________________________________
consensus GGGTTCATCCCTCTGGATTTCATTCTCCCAATGCTCCTCTACAACATGACTTTCAAACCC
. : . : . : . : . : . :
rJMSF028G14+ TCCAAGTCATCCCTAACCTTCTGGATTAACAACTTAATCATTATAGTGTTCACAGGTGCA
rJMSF026A12+ TCCAAGTCATCCCTAACCTTCTGGATTAACAACTTAATCATTATAGTGTTCACAGGTGCA
rJMFF031P14+ TCCAAGTCATCCCTAACCTTCTGGATTAACAACTTAATCATTATAGTGTTCACAGGTGCA
____________________________________________________________
consensus TCCAAGTCATCCCTAACCTTCTGGATTAACAACTTAATCATTATAGTGTTCACAGGTGCA
. : . : . : . : . : . :
rJMSF028G14+ GGACTTCTGGGCGCATTCTCTTCTATAAGGAAGTTGATCCTTGATGCCAATAAATTCAAG
rJMSF026A12+ GGACTTCTGGGCGCATTCTCTTCTATAAGGAAGTTGATCCTTGATGCCAATAAATTCAAG
rJMFF031P14+ GGACTTCTGGGCGCATTCTCTTCTATAAGGAAGTTGATCCTTGATGCCAATAAATTCAAG
____________________________________________________________
consensus GGACTTCTGGGCGCATTCTCTTCTATAAGGAAGTTGATCCTTGATGCCAATAAATTCAAG
. : . : . : . : . : . :
rJMSF028G14+ CTGTTCAGTAGTGACGTTGTGGACTGACAACATTGTTGTATAAATTTGTCTCTATAAATA
rJMSF026A12+ CTGTTCAGTAGTGACGTTGTGGACTGACAACATTGTTGTATAAATTTGTCTCTATAAATA
rJMFF031P14+ CTGTTCAGTAGTGACGTTGTGGACTGACAACATTGTTGTATAAATTTGTCTCTATAAATA
____________________________________________________________
consensus CTGTTCAGTAGTGACGTTGTGGACTGACAACATTGTTGTATAAATTTGTCTCTATAAATA
. : . : . : . : . : . :
rJMSF028G14+ GAAATGAATGCTCTGATCTTAGCTAGCTAGCTAAGCTAGCTTGTGCTTCATGTAATGTAA
rJMSF026A12+ GAAATGAATGCTCTGATCTTAGCTAGCTAGCTAAGCTAGCTTGTGCTTCATGTAATGTAA
rJMFF031P14+ GAAATGAATGCTCTGATCTTAGCTAGCTAGCTAAGCTAGCTTGTGCTTCATGTAATGTAA
____________________________________________________________
consensus GAAATGAATGCTCTGATCTTAGCTAGCTAGCTAAGCTAGCTTGTGCTTCATGTAATGTAA
. : . : . : . : . : . :
rJMSF028G14+ TACT
rJMSF026A12+ TACTTAGCTCTAAACAGTTTGAATGTATAGACGTATAGTATACTACAAAGAAATGAGAAG
rJMFF031P14+ TACTTAGCTCTAAACAGTTTGAATGTATAGACGTATAGTATACTACAAAGAAATGAGAAG
____________________________________________________________
consensus TACTTAGCTCTAAACAGTTTGAATGTATAGACGTATAGTATACTACAAAGAAATGAGAAG
. : . : . : . : . : . :
rJMSF026A12+ AAAATGGACGGTGCATGGTGTAGAGAGTTTTGAGGTGAATACACGCAATCATGCAAAAAT
rJMFF031P14+ AAAATGGACGGTGCATGGTGTAGAGAGTTTTGAGGTGAATACACGCAATCATGCAAAAAT
____________________________________________________________
consensus AAAATGGACGGTGCATGGTGTAGAGAGTTTTGAGGTGAATACACGCAATCATGCAAAAAT
. : . : . : . : . : . :
rJMSF026A12+ TGTGGAGGAGTT
rJMFF031P14+ TGTGGAGGAGTTCACGTGTAGAACAATTGACTCCTTCAATTGTGAATCAATTAAGCCACA
____________________________________________________________
consensus TGTGGAGGAGTTCACGTGTAGAACAATTGACTCCTTCAATTGTGAATCAATTAAGCCACA