| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024I10 | Sequence | 435 | 003594 (13) | emb|CAN76413.1| | 1e-81 | hypothetical protein VITISV_043812 [Vitis vinifera] | 747 | 011101 (9) | ref|XP_006357255.1| | 2e-112 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
| JMFF026F20 | Sequence | 614 | 003594 (13) | emb|CDP05334.1| | 2e-118 | unnamed protein product [Coffea canephora] | 759 | 011101 (9) | ref|XP_009786961.1| | 3e-97 | PREDICTED: conserved oligomeric Golgi complex subunit 7 [Nicotiana sylvestris] |
| JMFF030J06 | Sequence | 383 | 003594 (13) | emb|CAN76413.1| | 8e-69 | hypothetical protein VITISV_043812 [Vitis vinifera] | 723 | 011101 (9) | ref|XP_006357255.1| | 5e-107 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
| JMFF031I22 | Sequence | 562 | 003594 (13) | emb|CDP05334.1| | 2e-101 | unnamed protein product [Coffea canephora] | 774 | 011101 (9) | ref|XP_006357255.1| | 2e-113 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
| JMSF011O01 | Sequence | 310 | 003594 (13) | emb|CDP05334.1| | 4e-47 | unnamed protein product [Coffea canephora] | 753 | 011101 (9) | ref|XP_006357255.1| | 1e-115 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
| JMSF012F09 | Sequence | 236 | 003594 (13) | emb|CDP05334.1| | 2e-23 | unnamed protein product [Coffea canephora] | 789 | 011101 (9) | ref|XP_009786961.1| | 6e-97 | PREDICTED: conserved oligomeric Golgi complex subunit 7 [Nicotiana sylvestris] |
| JMSF020D16 | Sequence | 676 | 003594 (13) | ref|XP_004238762.1| | 1e-134 | PREDICTED: conserved oligomeric Golgi complex subunit 7 [Solanum lycopersicum] | 757 | 011101 (9) | ref|XP_006357255.1| | 4e-116 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
| JMSF024K24 | Sequence | 695 | 003594 (13) | emb|CAN76413.1| | 5e-130 | hypothetical protein VITISV_043812 [Vitis vinifera] | 771 | 011101 (9) | ref|XP_006357255.1| | 1e-109 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
| JMSF045B23 | Sequence | 140 | 003594 (13) | gb|KDP22425.1| | 3e-04 | hypothetical protein JCGZ_26256 [Jatropha curcas] | 744 | 011101 (9) | ref|XP_006357255.1| | 7e-110 | PREDICTED: conserved oligomeric Golgi complex subunit 7-like [Solanum tuberosum |
This contig is upended
. : . : . : . : . : . :
rJMSF020D16+ T
____________________________________________________________
consensus T
. : . : . : . : . : . :
rJMSF020D16+ TCTCAACGGGTTACGTCTTTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
rJMSF011O01+ TCAACGGGTTACGTCTTTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
rJMFF026F20+ TGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
rJMFF030J06+ GTTTATGATGTACTTATA
rJMSF045B23+ GTTAATGAGCTTGTTTATGATGTACTTATA
rJMSF024K24+ TTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
rJMFF024I10+ TTTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
rJMSF012F09+ CTTTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
rJMFF031I22+ CAACGGGTTACGTCTTTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
____________________________________________________________
consensus TCTCAACGGGTTACGTCTTTTGCAGATGCTGTTAATGAGCTTGTTTATGATGTACTTATA
. : . : . : . : . : . :
rJMSF020D16+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMSF011O01+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMFF026F20+ TCAAAAGTACGACAACACTTCCAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMFF030J06+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMSF045B23+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMSF024K24+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMFF024I10+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMSF012F09+ TCAAAAGTACGACAACACTTCCAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
rJMFF031I22+ TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
____________________________________________________________
consensus TCAAAAGTACGACAACACTT-CAATGATTTATCTCGTTTGCCTATATGGTCTTCTGTAGA
. : . : . : . : . : . :
rJMSF020D16+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMSF011O01+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMFF026F20+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMFF030J06+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMSF045B23+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMSF024K24+ AGAGCATAGTGCTCGTCCCCCCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMFF024I10+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMSF012F09+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
rJMFF031I22+ AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
____________________________________________________________
consensus AGAGCATAGTGCTCGTCCCCTCCCAACATTCAGTGCATATCCTCAGTCTTATGTTACTAA
. : . : . : . : . : . :
rJMSF020D16+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMSF011O01+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMFF026F20+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMFF030J06+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMSF045B23+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMSF024K24+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMFF024I10+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMSF012F09+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
rJMFF031I22+ TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
____________________________________________________________
consensus TGTTGGTGAGTATCTTCTGACGTTACCCCAACAATTAGAGCCTCTTGCAGAGGGAATTTC
. : . : . : . : . : . :
rJMSF020D16+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMSF011O01+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMFF026F20+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMFF030J06+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMSF045B23+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMSF024K24+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMFF024I10+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
rJMSF012F09+ CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTCGCTACTGAATGGATGTTTAAGGT
rJMFF031I22+ CAATTNTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
____________________________________________________________
consensus CAATTCTGATGCCAATGCTGATGAGGCCCAGTACTTTGCTACTGAATGGATGTTTAAGGT
. : . : . : . : . : . :
rJMSF020D16+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMSF011O01+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMFF026F20+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMFF030J06+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMSF045B23+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMSF024K24+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMFF024I10+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMSF012F09+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
rJMFF031I22+ TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
____________________________________________________________
consensus TGCAGAAGGTGCTACTGCTCTTTATGTGGATCAATTGCGTGGCATTCAGTATATCACCGA
. : . : . : . : . : . :
rJMSF020D16+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMSF011O01+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMFF026F20+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMFF030J06+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMSF045B23+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMSF024K24+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMFF024I10+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMSF012F09+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
rJMFF031I22+ TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
____________________________________________________________
consensus TCGTGGAGCGCAGCAACTCTCTGTTGATATTGAGTACTTAAGTAATGTGCTTTCAGCTCT
. : . : . : . : . : . :
rJMSF020D16+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMSF011O01+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMFF026F20+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMFF030J06+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMSF045B23+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMSF024K24+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMFF024I10+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMSF012F09+ ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
rJMFF031I22+ ATCGATGGCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
____________________________________________________________
consensus ATCGATGCCCGTTCCTCCAGTTCTTGCCACCTTCCATTCATGTCTCTCAACTCCAAGAAG
. : . : . : . : . : . :
rJMSF020D16+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMSF011O01+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMFF026F20+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMFF030J06+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMSF045B23+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMSF024K24+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMFF024I10+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMSF012F09+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
rJMFF031I22+ TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
____________________________________________________________
consensus TCAGCTCAAGGAACTTGTAAAATCTGATTCTGGAAATCAGCTTGATCTACCCACTGCCAA
. : . : . : . : . : . :
rJMSF020D16+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMSF011O01+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMFF026F20+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMFF030J06+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMSF045B23+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMSF024K24+ CCTTGTGTGCAAAATGTGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMFF024I10+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMSF012F09+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
rJMFF031I22+ CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
____________________________________________________________
consensus CCTTGTGTGCAAAATGCGCCGTGTTAGTTTGGAGTAATGGCACAATGATTGGAGCATTCC
. : . : . : . : . : . :
rJMSF020D16+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMSF011O01+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMFF026F20+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMFF030J06+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMSF045B23+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMSF024K24+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMFF024I10+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMSF012F09+ TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
rJMFF031I22+ TACTGTTC--ATACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
____________________________________________________________
consensus TACTGTTCAGAGACCCTGTAAGGTTCACCCTTTCTGGGCCAGTATACTTCGTTGGGTGTG
. : . : . : . : . : . :
rJMSF020D16+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMSF011O01+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMFF026F20+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMFF030J06+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMSF045B23+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMSF024K24+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMFF024I10+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMSF012F09+ TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
rJMFF031I22+ TGGTTTAAGAATTATGTTACCACGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
____________________________________________________________
consensus TGGTTTAAGAATTATGTTACCCCGTATCATATTCTGCTTGTGCTGGGGAAAAAGGGAGGA
. : . : . : . : . : . :
rJMSF020D16+ TAGGCTGGAATTTTTTTTTCCCCAATC
rJMSF011O01+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTT
rJMFF026F20+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACTATACGAAATTG
rJMFF030J06+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACTA
rJMSF045B23+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACTATA
rJMSF024K24+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACTATACGAAATTG
rJMFF024I10+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACT
rJMSF012F09+ TAGGCTGGAA-TTTTTTTTCCCCAATCATGCATTTTTGTTGTACTATACGAAATTG
rJMFF031I22+ TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACTATACGAAATTGGTGT
____________________________________________________________
consensus TAGGCTGGAATTTTTTTTTCCCCAATCATGCATTTTTGTTGTACTATACGAAATTGGTGT