Contig 011098:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF002J04-                                  GATTTCAGTTGCTGCTGCTGCTGCTTCCTTCCTCTCC
JMFF031D21-                GGGGAAACTATGGGCTCTGATTTCAGTTGCTGCTGCTGCTGCTTCCTTCCTCTCC
                      ____________________________________________________________
consensus                  GGGGAAACTATGGGCTCTGATTTCAGTTGCTGCTGCTGCTGCTTCCTTCCTCTCC
 
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JMFF002J04-           TCCGGTAAGACAGACGCAAAGGAGAAAGAATAAACAAAACAAGGTTCCATTTTTTCTGCT
JMFF031D21-           TCCGGTAAGACAGACGCAAAGGAGAAAGAATAAACAAAACAAGGTTCCATTTTTTCTGCT
                      ____________________________________________________________
consensus             TCCGGTAAGACAGACGCAAAGGAGAAAGAATAAACAAAACAAGGTTCCATTTTTTCTGCT
 
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JMFF002J04-           CGCACTCTCTCCTACTTCTTTGCTTTCTGTGCTGCGATATTCTCAGATGGGTCAACAAAC
JMFF031D21-           CGCACTCTCTCCTACTTCTTTGCTTTCTGTGCTGCGATATTCTCAGATGGGTCAACAAAC
                      ____________________________________________________________
consensus             CGCACTCTCTCCTACTTCTTTGCTTTCTGTGCTGCGATATTCTCAGATGGGTCAACAAAC
 
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JMFF002J04-           AGCTGATTCTAAAGTTGGAGATTATGGGGCAAATACTGAAAGTAGTGTGCCCAATTCTGA
JMFF031D21-           AGCTGATTCTAAAGTTGGAGATTATGGGGCAAATACTGAAAGTAGTGTGCCCAATTCTGA
                      ____________________________________________________________
consensus             AGCTGATTCTAAAGTTGGAGATTATGGGGCAAATACTGAAAGTAGTGTGCCCAATTCTGA
 
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JMFF002J04-           CAAACAACCATCAGATCTTGTAGCTGCTAAAAGCATTCCACAGTGTGAAAATTTAGCCCC
JMFF031D21-           CAAACAACCATCAGATCTTGTAGCTGCTAAAAGCATTCCACAGTGTGAAAATTTAGCCCC
                      ____________________________________________________________
consensus             CAAACAACCATCAGATCTTGTAGCTGCTAAAAGCATTCCACAGTGTGAAAATTTAGCCCC
 
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JMFF002J04-           TAAATCTATTATAAGTACAGCATCTCAAAAGAATAATGGCCCCGCCGGTGAAGCTTCTAA
JMFF031D21-           TAAATCTATTATAAGTACAGCATCTCAAAAGAATAATGGCCCCGCCGGTGAAGCTTCTAA
                      ____________________________________________________________
consensus             TAAATCTATTATAAGTACAGCATCTCAAAAGAATAATGGCCCCGCCGGTGAAGCTTCTAA
 
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JMFF002J04-           AATTTGTGGTTCTAAAAGATCCAACCCAGATTGCCCTGTAAACTCTCTTCAAAGCCAATG
JMFF031D21-           AATTTGTGGTTCTAAAAGATCCAACCCAGATTGCCCTGTAAACTCTCTTCAAAGCCAATG
                      ____________________________________________________________
consensus             AATTTGTGGTTCTAAAAGATCCAACCCAGATTGCCCTGTAAACTCTCTTCAAAGCCAATG
 
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JMFF002J04-           CCCTACAAGCAATTCTGGAAATGGGCATCTTGTATATGTCAGGAGAAGACCCGATGCTGA
JMFF031D21-           CCCTACAAGCAATTCTGGAAATGGGCATCTTGTATATGTCAGGAGAAGACCCGATGCTGA
rJMFF002J04+                                                 CAGGAGAAGACCCGATGCTGA
                      ____________________________________________________________
consensus             CCCTACAAGCAATTCTGGAAATGGGCATCTTGTATATGTCAGGAGAAGACCCGATGCTGA
 
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JMFF002J04-           ATTAGGTAAAAGTACAACTTCCGAGGATCAACATTGTGTTTCTGATCGCCTTGGAG---G
JMFF031D21-           ATTAGGTAAAAGTACAACTTCCGAGGATCAACATTGTGTTTCTGATCGCCTTGGAGGAAG
rJMFF002J04+          ATTAGGTAAAAGTACAACTTCCGAGGATCAACATTGTGTTTCTGATCGCCTTGGAG---G
                      ____________________________________________________________
consensus             ATTAGGTAAAAGTACAACTTCCGAGGATCAACATTGTGTTTCTGATCGCCTTGGAG---G
 
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JMFF002J04-           AAGAAGACCCCCCGATGCTGAATTAGATAAAAGTACAACTTCTGAGGATCAAC       
JMFF031D21-           AAGAAGACCCCCCGATGCTGAATTAGATAAAAGTACAACTTCTGAGGATCAAC       
rJMFF002J04+          AAGAAGACCCCCCGATGCTGAATTAGATAAAAGTACAACTTCTGAGGATCAACGTGAGCA
                      ____________________________________________________________
consensus             AAGAAGACCCCCCGATGCTGAATTAGATAAAAGTACAACTTCTGAGGATCAACGTGAGCA
 
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rJMFF002J04+          GAAAAGATTTGGCGAACAGGATGAAAAAGTCCAACAAGAAGTTCAGATTAAGGAATCTAG
rJMFF031D21+                             GATGAAAAAGTCCAACAAGAAGTTCAGATTAAGGAATCTAG
                      ____________________________________________________________
consensus             GAAAAGATTTGGCGAACAGGATGAAAAAGTCCAACAAGAAGTTCAGATTAAGGAATCTAG
 
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rJMFF002J04+          CAATTGTTTACCCAAAGTTTTAGAAATTCCAAAGGCTTCCTTGGTATGCTACTTGCCTAT
rJMFF031D21+          CAATTGTTTACCCAAAGTTTTAGAAATTCCAAAGGCTTCCTTGGTATGCTACTTGCCTAT
                      ____________________________________________________________
consensus             CAATTGTTTACCCAAAGTTTTAGAAATTCCAAAGGCTTCCTTGGTATGCTACTTGCCTAT
 
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rJMFF002J04+          GAAACCTTCAGCGGGTTCTTCTACCGAGAAGTGCAAGAACAATTATCCATTATCTAATTT
rJMFF031D21+          GAAACCTTCAGCGGGTTCTTCTACCGAGAAGTGCAAGAACAATTATCCATTATCTAATTT
                      ____________________________________________________________
consensus             GAAACCTTCAGCGGGTTCTTCTACCGAGAAGTGCAAGAACAATTATCCATTATCTAATTT
 
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rJMFF002J04+          AAGTAATCTCCATACCACTTCTACGAATCATCTGTTGGATACTCCAAAGAGAGCAAAACT
rJMFF031D21+          AAGTAATCTCCATACCACTTCTACGAATCATCTGTTGGATACTCCAAAGAGAGCAAAACT
                      ____________________________________________________________
consensus             AAGTAATCTCCATACCACTTCTACGAATCATCTGTTGGATACTCCAAAGAGAGCAAAACT
 
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rJMFF002J04+          TAAAGAGTGGGAAGAGCGATATTGCCGATTGCAGAATTTGTTGAATAGTTTGGAGCAATC
rJMFF031D21+          TAAAGAGTGGGAAGAGCGATATTGCCGATTGCAGAATTTGTTGAATAGTTTGGAGCAATC
                      ____________________________________________________________
consensus             TAAAGAGTGGGAAGAGCGATATTGCCGATTGCAGAATTTGTTGAATAGTTTGGAGCAATC
 
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rJMFF002J04+          AAAGCAAGAGGATTACATCCAGATGCTTAGATCACTCTCTTCAGTTGAGCTTAGTAAACA
rJMFF031D21+          AAAGCAAGAGGATTACATCCAGATGCTTAGATCACTCTCTTCAGTTGAGCTTAGTAAACA
                      ____________________________________________________________
consensus             AAAGCAAGAGGATTACATCCAGATGCTTAGATCACTCTCTTCAGTTGAGCTTAGTAAACA
 
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rJMFF002J04+          TGCTGTTGAACTGGAGAAGAGGTCAATACAGCTTGCCTTGGAGGAAGCAAAAGAAATGCG
rJMFF031D21+          TGCTGTTGAACTGGAGAAGAGGTCAATACAGCTTGCCTTGGAGGAAGCAAAAGAAATGCG
                      ____________________________________________________________
consensus             TGCTGTTGAACTGGAGAAGAGGTCAATACAGCTTGCCTTGGAGGAAGCAAAAGAAATGCG
 
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rJMFF002J04+          ATGGGTCAAAGTGTTGGATGTACTGGGGAAGGATTGGAATTCCAGAGCATGCTAGCAAGG
rJMFF031D21+          ATGGGTCAAAGTGTTGGATGTACTGGGGAAGGATTGGAATTCCAGAGCATGCTAGCAAGG
                      ____________________________________________________________
consensus             ATGGGTCAAAGTGTTGGATGTACTGGGGAAGGATTGGAATTCCAGAGCATGCTAGCAAGG
 
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rJMFF002J04+          GTGAGGGTGGAGTTGAAGAGGCAGGCAGATGAGAGAAGATGTAGGAAATATATAATATAA
rJMFF031D21+          GTGAGGGTGGAGTTGAAGAGGCAGGCAGATGAGAGAAGATGTAGGAAATATATAATATAA
                      ____________________________________________________________
consensus             GTGAGGGTGGAGTTGAAGAGGCAGGCAGATGAGAGAAGATGTAGGAAATATATAATATAA
 
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rJMFF002J04+          TATACATAGCAAGTGTATTGAAGCAAAGTTTGTATAGTGTAGTATTATTCATTGCTTTGA
rJMFF031D21+          TATACATAGCAAGTGTATTGAAGCAAAGTTTGTATAGTGTAGTATTATTCATTGCTTTGA
                      ____________________________________________________________
consensus             TATACATAGCAAGTGTATTGAAGCAAAGTTTGTATAGTGTAGTATTATTCATTGCTTTGA
 
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rJMFF002J04+          AGTCAAACTAACAGTGAAAAGTAAATAATAAT                            
rJMFF031D21+          AGTCAAACTAACAGTGAAAAGTAAATAATAATGTTGTGAAGATGAGAATTGCGCTGTAGC
                      ____________________________________________________________
consensus             AGTCAAACTAACAGTGAAAAGTAAATAATAATGTTGTGAAGATGAGAATTGCGCTGTAGC
 
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rJMFF031D21+          TTTATGTGGCTTGCTGCAAAGCTGATTGATTAATTTGTTTAACTTCAATTCCAGGAACAC
                      ____________________________________________________________
consensus             TTTATGTGGCTTGCTGCAAAGCTGATTGATTAATTTGTTTAACTTCAATTCCAGGAACAC
 
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rJMFF031D21+          TTCACTCCAATTTGTAACATATACTATACTATACCGTTGTAACATACATGATATGGTGTA
                      ____________________________________________________________
consensus             TTCACTCCAATTTGTAACATATACTATACTATACCGTTGTAACATACATGATATGGTGTA