Contig 011094:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030G11Sequence568012931 (2)ref|XP_009367792.1|9e-39PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Pyrus x brets278011094 (2)
JMFF036J23Sequence577012931 (2)ref|XP_009367792.1|3e-38PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Pyrus x brets737011094 (2)ref|XP_009620976.1|8e-81PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Nicotiana tom

Alignment

This contig is upended


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rJMFF036J23+                                                                    TG
                      ____________________________________________________________
consensus                                                                       TG
 
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rJMFF036J23+          GCTGACTTTGGTTTCGCAAGGCTGGCAGCTGATAGCGAGTCTGGAGCCACACATGTTTCT
                      ____________________________________________________________
consensus             GCTGACTTTGGTTTCGCAAGGCTGGCAGCTGATAGCGAGTCTGGAGCCACACATGTTTCT
 
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rJMFF036J23+          ACCCAAGTCAAAGGAACTGCTGGCTACTTGGACCCAGAATATCTCAGAACCTATCAGCTT
                      ____________________________________________________________
consensus             ACCCAAGTCAAAGGAACTGCTGGCTACTTGGACCCAGAATATCTCAGAACCTATCAGCTT
 
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rJMFF036J23+          ACTGAGAAGAGTGATGTCTACTCATTTGGTGTATTGCTTGTCGAGCTTGTCACAGGCAGG
                      ____________________________________________________________
consensus             ACTGAGAAGAGTGATGTCTACTCATTTGGTGTATTGCTTGTCGAGCTTGTCACAGGCAGG
 
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rJMFF036J23+          CGACCCATTGAGCCTACACGAGAACTCAAAGAGCGAATAACTGCTAGATGGGCTGTGAAA
                      ____________________________________________________________
consensus             CGACCCATTGAGCCTACACGAGAACTCAAAGAGCGAATAACTGCTAGATGGGCTGTGAAA
 
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rJMFF036J23+          AAATTCACTGAAGGAGATGCAATTTTAATTCTGGATCCAAGACTAGAAAGATCTGCTGCA
                      ____________________________________________________________
consensus             AAATTCACTGAAGGAGATGCAATTTTAATTCTGGATCCAAGACTAGAAAGATCTGCTGCA
 
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rJMFF036J23+          AATAGTATGATTGCAGAAAGAATTCTTGAATTAGCTTTACTATGCTTGGCTCCTCACAGA
                      ____________________________________________________________
consensus             AATAGTATGATTGCAGAAAGAATTCTTGAATTAGCTTTACTATGCTTGGCTCCTCACAGA
 
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rJMFF036J23+          CATAGCCGGCCTGCAATGAGGAAGTGCACGGAGATTCTTTGGAGCATCCGCAAGGATTTA
                      ____________________________________________________________
consensus             CATAGCCGGCCTGCAATGAGGAAGTGCACGGAGATTCTTTGGAGCATCCGCAAGGATTTA
 
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rJMFF036J23+          TCAGATCCAAATACCTGTTAACTGTGTAGAAACATATGCTCATGTATGCCAAACGGAGCA
                      ____________________________________________________________
consensus             TCAGATCCAAATACCTGTTAACTGTGTAGAAACATATGCTCATGTATGCCAAACGGAGCA
 
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rJMFF036J23+          GGTTTTTATGCCACATGCTGATGGGGGAATTGTGTTCCAGGAAGCAGCAAATTGCATTCA
rJMFF030G11+                                GGGGGAATTGNGTTCCANNAAGCAGCANATTGCANTCA
                      ____________________________________________________________
consensus             GGTTTTTATGCCACATGCTGATGGGGGAATTGTGTTCCAGGAAGCAGCAAATTGCATTCA
 
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rJMFF036J23+          GGAAGGTGGCTCTTTTCTGTTGATTTTTATTGTATGAGCTGCACAGAAGAATATTAAGAA
rJMFF030G11+          GGAAGGTGGCTCTNTTNNGTTGATTTNTATGGTATGAGCTGCACAGNAGAATANTAAGAA
                      ____________________________________________________________
consensus             GGAAGGTGGCTCTTTTCTGTTGATTTTTATTGTATGAGCTGCACAGAAGAATATTAAGAA
 
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rJMFF036J23+          GTAAGTTTCTTGAGGAAATACTTGAATGCAAGTACTTCAATATTTAGCAAGATTGTATAG
rJMFF030G11+          GTNAGTNTNNNGAGGAAATANTNNAANGCAAGTACTTCAATANNTAGCAAGATTGTANAG
                      ____________________________________________________________
consensus             GTAAGTTTCTTGAGGAAATACTTGAATGCAAGTACTTCAATATTTAGCAAGATTGTATAG
 
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rJMFF036J23+          AAGAATTTGTTGAATGATGTATCGTACTTGTGCATAGGAGATTCATTTGTGGACACAATA
rJMFF030G11+          AAGAATNNNTNGAATGATGTATCGTATCNGNGCATAGGNGATTCATTNNTNGACACAATA
                      ____________________________________________________________
consensus             AAGAATTTGTTGAATGATGTATCGTATTTGTGCATAGGAGATTCATTTGTGGACACAATA
 
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rJMFF036J23+          AAGAATTT                                                    
rJMFF030G11+          AAGAATTTNANTTATGTNATGGGATGNATTTCCTCTTCTTNTCCTCTCCTCATGATATTC
                      ____________________________________________________________
consensus             AAGAATTTNANTTATGTNATGGGATGNATTTCCTCTTCTTNTCCTCTCCTCATGATATTC