Contig 011094:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030G11Sequence568012931 (2)ref|XP_009367792.1|9e-39PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Pyrus x brets278011094 (2)
JMFF036J23Sequence577012931 (2)ref|XP_009367792.1|3e-38PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Pyrus x brets737011094 (2)ref|XP_009620976.1|8e-81PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Nicotiana tom

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF036J23+ TG
                      ____________________________________________________________
consensus TG
 
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rJMFF036J23+ GCTGACTTTGGTTTCGCAAGGCTGGCAGCTGATAGCGAGTCTGGAGCCACACATGTTTCT
                      ____________________________________________________________
consensus GCTGACTTTGGTTTCGCAAGGCTGGCAGCTGATAGCGAGTCTGGAGCCACACATGTTTCT
 
. : . : . : . : . : . :
rJMFF036J23+ ACCCAAGTCAAAGGAACTGCTGGCTACTTGGACCCAGAATATCTCAGAACCTATCAGCTT
                      ____________________________________________________________
consensus ACCCAAGTCAAAGGAACTGCTGGCTACTTGGACCCAGAATATCTCAGAACCTATCAGCTT
 
. : . : . : . : . : . :
rJMFF036J23+ ACTGAGAAGAGTGATGTCTACTCATTTGGTGTATTGCTTGTCGAGCTTGTCACAGGCAGG
                      ____________________________________________________________
consensus ACTGAGAAGAGTGATGTCTACTCATTTGGTGTATTGCTTGTCGAGCTTGTCACAGGCAGG
 
. : . : . : . : . : . :
rJMFF036J23+ CGACCCATTGAGCCTACACGAGAACTCAAAGAGCGAATAACTGCTAGATGGGCTGTGAAA
                      ____________________________________________________________
consensus CGACCCATTGAGCCTACACGAGAACTCAAAGAGCGAATAACTGCTAGATGGGCTGTGAAA
 
. : . : . : . : . : . :
rJMFF036J23+ AAATTCACTGAAGGAGATGCAATTTTAATTCTGGATCCAAGACTAGAAAGATCTGCTGCA
                      ____________________________________________________________
consensus AAATTCACTGAAGGAGATGCAATTTTAATTCTGGATCCAAGACTAGAAAGATCTGCTGCA
 
. : . : . : . : . : . :
rJMFF036J23+ AATAGTATGATTGCAGAAAGAATTCTTGAATTAGCTTTACTATGCTTGGCTCCTCACAGA
                      ____________________________________________________________
consensus AATAGTATGATTGCAGAAAGAATTCTTGAATTAGCTTTACTATGCTTGGCTCCTCACAGA
 
. : . : . : . : . : . :
rJMFF036J23+ CATAGCCGGCCTGCAATGAGGAAGTGCACGGAGATTCTTTGGAGCATCCGCAAGGATTTA
                      ____________________________________________________________
consensus CATAGCCGGCCTGCAATGAGGAAGTGCACGGAGATTCTTTGGAGCATCCGCAAGGATTTA
 
. : . : . : . : . : . :
rJMFF036J23+ TCAGATCCAAATACCTGTTAACTGTGTAGAAACATATGCTCATGTATGCCAAACGGAGCA
                      ____________________________________________________________
consensus TCAGATCCAAATACCTGTTAACTGTGTAGAAACATATGCTCATGTATGCCAAACGGAGCA
 
. : . : . : . : . : . :
rJMFF036J23+ GGTTTTTATGCCACATGCTGATGGGGGAATTGTGTTCCAGGAAGCAGCAAATTGCATTCA
rJMFF030G11+ GGGGGAATTGNGTTCCANNAAGCAGCANATTGCANTCA
                      ____________________________________________________________
consensus GGTTTTTATGCCACATGCTGATGGGGGAATTGTGTTCCAGGAAGCAGCAAATTGCATTCA
 
. : . : . : . : . : . :
rJMFF036J23+ GGAAGGTGGCTCTTTTCTGTTGATTTTTATTGTATGAGCTGCACAGAAGAATATTAAGAA
rJMFF030G11+ GGAAGGTGGCTCTNTTNNGTTGATTTNTATGGTATGAGCTGCACAGNAGAATANTAAGAA
                      ____________________________________________________________
consensus GGAAGGTGGCTCTTTTCTGTTGATTTTTATTGTATGAGCTGCACAGAAGAATATTAAGAA
 
. : . : . : . : . : . :
rJMFF036J23+ GTAAGTTTCTTGAGGAAATACTTGAATGCAAGTACTTCAATATTTAGCAAGATTGTATAG
rJMFF030G11+ GTNAGTNTNNNGAGGAAATANTNNAANGCAAGTACTTCAATANNTAGCAAGATTGTANAG
                      ____________________________________________________________
consensus GTAAGTTTCTTGAGGAAATACTTGAATGCAAGTACTTCAATATTTAGCAAGATTGTATAG
 
. : . : . : . : . : . :
rJMFF036J23+ AAGAATTTGTTGAATGATGTATCGTACTTGTGCATAGGAGATTCATTTGTGGACACAATA
rJMFF030G11+ AAGAATNNNTNGAATGATGTATCGTATCNGNGCATAGGNGATTCATTNNTNGACACAATA
                      ____________________________________________________________
consensus AAGAATTTGTTGAATGATGTATCGTATTTGTGCATAGGAGATTCATTTGTGGACACAATA
 
. : . : . : . : . : . :
rJMFF036J23+ AAGAATTT
rJMFF030G11+ AAGAATTTNANTTATGTNATGGGATGNATTTCCTCTTCTTNTCCTCTCCTCATGATATTC
                      ____________________________________________________________
consensus AAGAATTTNANTTATGTNATGGGATGNATTTCCTCTTCTTNTCCTCTCCTCATGATATTC