Contig 011092:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020A01Sequence487008778 (3)emb|CDP03114.1|1e-13unnamed protein product [Coffea canephora]644011092 (3)emb|CDP03114.1|3e-44unnamed protein product [Coffea canephora]
JMFF029K19Sequence362008778 (3)emb|CDP03114.1|4e-13unnamed protein product [Coffea canephora]711011092 (3)emb|CDP03114.1|1e-38unnamed protein product [Coffea canephora]
JMFF043B07Sequence600008778 (3)emb|CDP03114.1|2e-13unnamed protein product [Coffea canephora]640011092 (3)emb|CDP03114.1|7e-39unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF020A01+ GAAAAAGGTGAAACAGCCGAT
                      ____________________________________________________________
consensus GAAAAAGGTGAAACAGCCGAT
 
. : . : . : . : . : . :
rJMFF020A01+ TTCACCGGGCGGAAAAATCGCTAACTTCNTGAATTCAATATTCAACTCATCGAGATCAAG
rJMFF029K19+ CGGAAAAATCGCTAACTTCNNGAATTCAATATTCAACTCATCGAGATCAAG
                      ____________________________________________________________
consensus TTCACCGGGCGGAAAAATCGCTAACTTCNTGAATTCAATATTCAACTCATCGAGATCAAG
 
. : . : . : . : . : . :
rJMFF020A01+ CAATAGCNTGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
rJMFF043B07+ TGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
rJMFF029K19+ CAATAGCCTGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
                      ____________________________________________________________
consensus CAATAGCCTGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
 
. : . : . : . : . : . :
rJMFF020A01+ TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
rJMFF043B07+ TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
rJMFF029K19+ TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
                      ____________________________________________________________
consensus TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
 
. : . : . : . : . : . :
rJMFF020A01+ AGCCAAATCCAAAAGGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
rJMFF043B07+ AGCCAAATCCAAAAGGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
rJMFF029K19+ AGCCAAATCCAAAAAGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
                      ____________________________________________________________
consensus AGCCAAATCCAAAAGGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
 
. : . : . : . : . : . :
rJMFF020A01+ CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
rJMFF043B07+ CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
rJMFF029K19+ CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
                      ____________________________________________________________
consensus CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
 
. : . : . : . : . : . :
rJMFF020A01+ TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
rJMFF043B07+ TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
rJMFF029K19+ TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
                      ____________________________________________________________
consensus TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
 
. : . : . : . : . : . :
rJMFF020A01+ CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
rJMFF043B07+ CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
rJMFF029K19+ CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
                      ____________________________________________________________
consensus CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
 
. : . : . : . : . : . :
rJMFF020A01+ TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
rJMFF043B07+ TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
rJMFF029K19+ TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
                      ____________________________________________________________
consensus TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
 
. : . : . : . : . : . :
rJMFF020A01+ TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
rJMFF043B07+ TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
rJMFF029K19+ TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
                      ____________________________________________________________
consensus TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
 
. : . : . : . : . : . :
rJMFF020A01+ ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
rJMFF043B07+ ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
rJMFF029K19+ ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
                      ____________________________________________________________
consensus ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
 
. : . : . : . : . : . :
rJMFF020A01+ TACGGGCTACCCTCTGTATCATA
rJMFF043B07+ TACGGGCTACCCTCTGTATCATATTCAACTTTGTTTATGAAAGCTTTGCGTTATGCTTGC
rJMFF029K19+ TACGGGCTACCCTCTGTATCATATTCAACTTTGTTTATGAAAGCTTTGCGTTATGCTTGC
                      ____________________________________________________________
consensus TACGGGCTACCCTCTGTATCATATTCAACTTTGTTTATGAAAGCTTTGCGTTATGCTTGC
 
. : . : . : . : . : . :
rJMFF043B07+ T
rJMFF029K19+ TAGTTGCTAGTATAAAGGCTAAATTAGTGTAACTTTTTTGGCAAAGAGAGAAATCAGCAT
                      ____________________________________________________________
consensus TAGTTGCTAGTATAAAGGCTAAATTAGTGTAACTTTTTTGGCAAAGAGAGAAATCAGCAT