Contig 011092:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020A01Sequence487008778 (3)emb|CDP03114.1|1e-13unnamed protein product [Coffea canephora]644011092 (3)emb|CDP03114.1|3e-44unnamed protein product [Coffea canephora]
JMFF029K19Sequence362008778 (3)emb|CDP03114.1|4e-13unnamed protein product [Coffea canephora]711011092 (3)emb|CDP03114.1|1e-38unnamed protein product [Coffea canephora]
JMFF043B07Sequence600008778 (3)emb|CDP03114.1|2e-13unnamed protein product [Coffea canephora]640011092 (3)emb|CDP03114.1|7e-39unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF020A01+                                                 GAAAAAGGTGAAACAGCCGAT
                      ____________________________________________________________
consensus                                                    GAAAAAGGTGAAACAGCCGAT
 
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rJMFF020A01+          TTCACCGGGCGGAAAAATCGCTAACTTCNTGAATTCAATATTCAACTCATCGAGATCAAG
rJMFF029K19+                   CGGAAAAATCGCTAACTTCNNGAATTCAATATTCAACTCATCGAGATCAAG
                      ____________________________________________________________
consensus             TTCACCGGGCGGAAAAATCGCTAACTTCNTGAATTCAATATTCAACTCATCGAGATCAAG
 
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rJMFF020A01+          CAATAGCNTGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
rJMFF043B07+                  TGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
rJMFF029K19+          CAATAGCCTGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
                      ____________________________________________________________
consensus             CAATAGCCTGAAGAAACACCCCGCGGAAGCCATCGAAGATTGGAGCTCAGTGACGAAGTC
 
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rJMFF020A01+          TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
rJMFF043B07+          TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
rJMFF029K19+          TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
                      ____________________________________________________________
consensus             TAGATCAGTGAAGGACTCAACAATGGCGTCCAGGTCTTGCCTGAACAAGACACCTTCCCG
 
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rJMFF020A01+          AGCCAAATCCAAAAGGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
rJMFF043B07+          AGCCAAATCCAAAAGGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
rJMFF029K19+          AGCCAAATCCAAAAAGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
                      ____________________________________________________________
consensus             AGCCAAATCCAAAAGGTCAGTGAGATTCTGCCCCGTCAGCGTCATCCTCGACGAAGATTG
 
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rJMFF020A01+          CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
rJMFF043B07+          CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
rJMFF029K19+          CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
                      ____________________________________________________________
consensus             CCAGCCCTGCGGCCACAAGAACACATACGAAAACGACAAGAATCCAATGCCATATATCCC
 
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rJMFF020A01+          TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
rJMFF043B07+          TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
rJMFF029K19+          TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
                      ____________________________________________________________
consensus             TACACATTACATTAACCACAGTTTCCGAGATTCCAGAGAAATTTACAGCAGTGACGACGA
 
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rJMFF020A01+          CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
rJMFF043B07+          CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
rJMFF029K19+          CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
                      ____________________________________________________________
consensus             CGACGAAGACGTGAGGAGCTGTACTAGCTCAGATCTGTTTGAACTGGAAAACGTCGGCTC
 
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rJMFF020A01+          TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
rJMFF043B07+          TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
rJMFF029K19+          TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
                      ____________________________________________________________
consensus             TTTCAGCCGCGTATTGGATGCAACGGCGGCGGCAGCGGCGGCGGATGAACTGCCTGTTTA
 
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rJMFF020A01+          TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
rJMFF043B07+          TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
rJMFF029K19+          TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
                      ____________________________________________________________
consensus             TGGAACCACCAGCCTTAAACTCAATCAAGCCATTGCTAATGGATTACGTTCATGATGATG
 
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rJMFF020A01+          ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
rJMFF043B07+          ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
rJMFF029K19+          ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
                      ____________________________________________________________
consensus             ATGTAACTTGATTAACAGTTCTTGGATCATTTAACTTGAGTGATTATATTATTATCTACC
 
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rJMFF020A01+          TACGGGCTACCCTCTGTATCATA                                     
rJMFF043B07+          TACGGGCTACCCTCTGTATCATATTCAACTTTGTTTATGAAAGCTTTGCGTTATGCTTGC
rJMFF029K19+          TACGGGCTACCCTCTGTATCATATTCAACTTTGTTTATGAAAGCTTTGCGTTATGCTTGC
                      ____________________________________________________________
consensus             TACGGGCTACCCTCTGTATCATATTCAACTTTGTTTATGAAAGCTTTGCGTTATGCTTGC
 
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rJMFF043B07+          T                                                           
rJMFF029K19+          TAGTTGCTAGTATAAAGGCTAAATTAGTGTAACTTTTTTGGCAAAGAGAGAAATCAGCAT
                      ____________________________________________________________
consensus             TAGTTGCTAGTATAAAGGCTAAATTAGTGTAACTTTTTTGGCAAAGAGAGAAATCAGCAT