| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028C08 | Sequence | 577 | 008051 (3) | ref|XP_009775369.1| | 2e-67 | PREDICTED: ornithine aminotransferase, mitochondrial [Nicotiana sylvestris] | 688 | 011084 (3) | ref|XP_009775369.1| | 4e-74 | PREDICTED: ornithine aminotransferase, mitochondrial [Nicotiana sylvestris] |
| JMFF031I14 | Sequence | 522 | 008051 (3) | ref|XP_009775369.1| | 6e-76 | PREDICTED: ornithine aminotransferase, mitochondrial [Nicotiana sylvestris] | 658 | 011084 (3) | ref|XP_009775369.1| | 5e-73 | PREDICTED: ornithine aminotransferase, mitochondrial [Nicotiana sylvestris] |
| JMSF045P23 | Sequence | 729 | 008051 (3) | ref|XP_009775369.1| | 2e-95 | PREDICTED: ornithine aminotransferase, mitochondrial [Nicotiana sylvestris] | 728 | 011084 (3) | ref|XP_009775369.1| | 4e-105 | PREDICTED: ornithine aminotransferase, mitochondrial [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF045P23+ CTGATGTCATAATATNGGGAAAAGCGTTGGGTGGTGGAG
____________________________________________________________
consensus CTGATGTCATAATATNGGGAAAAGCGTTGGGTGGTGGAG
. : . : . : . : . : . :
rJMSF045P23+ TGTTACCTGTAAGTGCAGTGCTAGCAGACAAAGATGTTATGCTTTGTATTCAGCCCGGAG
____________________________________________________________
consensus TGTTACCTGTAAGTGCAGTGCTAGCAGACAAAGATGTTATGCTTTGTATTCAGCCCGGAG
. : . : . : . : . : . :
rJMSF045P23+ AGCATGGAAGTACTTTCGGGGGGAATCCTTTGGCCAGCGCTGTTGGCATTGCGTCTCTAG
rJMFF031I14+ GCTGTTGGCATTGCGTCTCTAG
rJMFF028C08+ GCTGTTGGCATTGCGTCTCTAG
____________________________________________________________
consensus AGCATGGAAGTACTTTCGGGGGGAATCCTTTGGCCAGCGCTGTTGGCATTGCGTCTCTAG
. : . : . : . : . : . :
rJMSF045P23+ ACGTGATAAGAGATGAAGGACTTGCAGAGAGATCTGCTGAGATGGGAGAGCAGCTGAGGC
rJMFF031I14+ ACGTGATAAGAGATGAAGGACTTGCAGAGAGATCTGCTGAGATGGGAGAGCAGCTGAGGC
rJMFF028C08+ ACGTGATAAGAGATGAAGGACTTGCAGAGAGATCTGCTGAGATGGGAGAGCAGCTGAGGC
____________________________________________________________
consensus ACGTGATAAGAGATGAAGGACTTGCAGAGAGATCTGCTGAGATGGGAGAGCAGCTGAGGC
. : . : . : . : . : . :
rJMSF045P23+ AGCAGCTAACGAAGATTCAGCAGCGGTTTCCTGAAATCATAAAGGAAATTCGAGGAAGAG
rJMFF031I14+ AGCAGCTAACGAAGATTCAGCAGCGGTTTCCTGAAATCATAAAGGAAATTCGAGGAAGAG
rJMFF028C08+ AGCAGCTAACGAAGATTCAGCAGCGGTTTCCTGAAATCATAAAGGAAATTCGAGGAAGAG
____________________________________________________________
consensus AGCAGCTAACGAAGATTCAGCAGCGGTTTCCTGAAATCATAAAGGAAATTCGAGGAAGAG
. : . : . : . : . : . :
rJMSF045P23+ GGTTGTTCAACGCGGTAGAGCTGAACAGCAAGGCCTTGTTTCCCGTGACTGCTTACGACG
rJMFF031I14+ GGTTGTTCAACGCGGTAGAGCTGAACAGCAAGGCCTTGTTTCCCGTGACTGCTTACGACG
rJMFF028C08+ GGTTGTTCAACGCGGTAGAGCTGAACAGCAAGGCCTTGTTTCCCGTGACTGCTTACGACG
____________________________________________________________
consensus GGTTGTTCAACGCGGTAGAGCTGAACAGCAAGGCCTTGTTTCCCGTGACTGCTTACGACG
. : . : . : . : . : . :
rJMSF045P23+ TATGCCTAAAGCTGAAGGAGAGAGGGATTCTTGCCAAGCCAACTCATGATACTATAATAC
rJMFF031I14+ TATGCCTAAAGCTGAAGGAGAGAGGGATTCTTGCCAAGCCAACTCATGATACTATAATAC
rJMFF028C08+ TATGCCTAAAGCTGAAGGAGAGAGGGATTCTTGCCAAGCCAACTCATGATACTATAATAC
____________________________________________________________
consensus TATGCCTAAAGCTGAAGGAGAGAGGGATTCTTGCCAAGCCAACTCATGATACTATAATAC
. : . : . : . : . : . :
rJMSF045P23+ GTTTGACGCCCCCTCTTTCAATGAGTGACCATGAGCTTCGGCAAGGCTCAGAGGCATTGC
rJMFF031I14+ GTTTGACGCCCCCTCTTTCAATGAGTGACCATGAGCTTCGGCAAGGCTCAGAGGCATTGC
rJMFF028C08+ GTTTGACGCCCCCTCTTTCAATGAGTGACCATGAGCTTCGGCAAGGCTCAGAGGCATTGC
____________________________________________________________
consensus GTTTGACGCCCCCTCTTTCAATGAGTGACCATGAGCTTCGGCAAGGCTCAGAGGCATTGC
. : . : . : . : . : . :
rJMSF045P23+ ACGACGTTTTGGAGCTCGATCTACCAAAGATGCAGAAAGAAAAGCCAATGACGCAATCCC
rJMFF031I14+ ACGACGTTTTGGAGCTCGATCTACCAAAGATGCAGAAAGAAAAGCCAATGACGCAATCCC
rJMFF028C08+ ACGACGTTTTGGAGCTCGATCTACCAAAGATGCAGAAAGAAAAGCCAATGACGCAATCCC
____________________________________________________________
consensus ACGACGTTTTGGAGCTCGATCTACCAAAGATGCAGAAAGAAAAGCCAATGACGCAATCCC
. : . : . : . : . : . :
rJMSF045P23+ ATGCTGCATCTGTAAATGTATGTGACCGGTGTGGGCGCAATTTGTAATCTGCTGTGAATG
rJMFF031I14+ ATGCTGCATCTGTAAATGTATGTGACCGGTGTGGGCGCAATTTGTAATCTGCTGTGAATG
rJMFF028C08+ ATGCTGCATCTGTAAATGTATGTGACCGGTGTGGGCGCAATTTGTAATCTGCTGTGAATG
____________________________________________________________
consensus ATGCTGCATCTGTAAATGTATGTGACCGGTGTGGGCGCAATTTGTAATCTGCTGTGAATG
. : . : . : . : . : . :
rJMSF045P23+ ATGTGAGTCATAAGAATTGCAAGAATGTGGATTACAATAAAAAAGGAGGATGGGAAAAAG
rJMFF031I14+ ATGTGAGTCATAAGAATTGCAAGAATGTGGATTACAATAAAAAAGGAGGATGGAAAAAAG
rJMFF028C08+ ATGTGAGTCATAAGAATTGCAAGAATGTGGATTACAATAAAAAAGGAGGATGGGAAAAAG
____________________________________________________________
consensus ATGTGAGTCATAAGAATTGCAAGAATGTGGATTACAATAAAAAAGGAGGATGGGAAAAAG
. : . : . : . : . : . :
rJMSF045P23+ AGTTACAACTCCTTTGAATGGGGTGTATTAGTGAAGAAAATTAGGTTGCCTAGACCAGTA
rJMFF031I14+ AGTTACAACTCCTTTGAATGGGGTGTATTAGTGAAGAAAATTAGGTTGCCTAGACCAGTA
rJMFF028C08+ AGTTACAACTCCTTTGAATGGGGTGTATTAGTGAAGAAAATTAGGTTGCCTAGACCAGTA
____________________________________________________________
consensus AGTTACAACTCCTTTGAATGGGGTGTATTAGTGAAGAAAATTAGGTTGCCTAGACCAGTA
. : . : . : . : . : . :
rJMSF045P23+ CATTTGAAAAAT
rJMFF031I14+ CATTTGAAAAATCTGTTGTATTTTGCCCCATGTTGACATGTGAAGAAAATTACTATTCTT
rJMFF028C08+ CATTTGAAAAATCTGTTGTATTTTGCCCCATGTTGACATGTGAAGAAAATTACTATTCTT
____________________________________________________________
consensus CATTTGAAAAATCTGTTGTATTTTGCCCCATGTTGACATGTGAAGAAAATTACTATTCTT
. : . : . : . : . : . :
rJMFF031I14+ GTGTTCAGAACCCCCTAACAAAGTTGGTTAAACAAT
rJMFF028C08+ GTGTTCAGAACCCCCTAACAAAGTTGGTTAAACAATTAGCTTGATAACTGCTCAAGTTCG
____________________________________________________________
consensus GTGTTCAGAACCCCCTAACAAAGTTGGTTAAACAATTAGCTTGATAACTGCTCAAGTTCG