Contig 011082:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF038E20+                                       CCAGCTTGGGGACGAAGACCATCGGAGCTCC
                      ____________________________________________________________
consensus                                          CCAGCTTGGGGACGAAGACCATCGGAGCTCC
 
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rJMFF038E20+          GGAGTACTGCGAGGCCAACTTCACCAACTACTTCACCCACAAATTTTGGTCGGACCGGAG
                      ____________________________________________________________
consensus             GGAGTACTGCGAGGCCAACTTCACCAACTACTTCACCCACAAATTTTGGTCGGACCGGAG
 
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rJMFF038E20+          ATTTTCCGGCACCTTCAAGGGACGGAGTCCCTGCTACTTCAACACCGGCGTTATGGTCAT
                      ____________________________________________________________
consensus             ATTTTCCGGCACCTTCAAGGGACGGAGTCCCTGCTACTTCAACACCGGCGTTATGGTCAT
 
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rJMFF038E20+          AGATNTAGTCAAATGGAGGCGATTCGGGTATACGAAACGGATCGAGAGGTGGATGGAGAT
rJMFF031E16+                                          CGAAACGGATNGAGAGGTGGATGGAGAT
                      ____________________________________________________________
consensus             AGATNTAGTCAAATGGAGGCGATTCGGGTATACGAAACGGATCGAGAGGTGGATGGAGAT
 
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rJMFF038E20+          CCAGAAGACGAATCGCATNTACGAGCTAGGCTCACTGCCGCCTTTCCTANTAGTGTTCGC
rJMFF031E16+          CCAGAAGACGAATNGCATTTNCGAGNTAGGCTCNCTGCCNCCTTTCCTNNTAGTGTTCNC
                      ____________________________________________________________
consensus             CCAGAAGACGAATCGCATTTACGAGCTAGGCTCACTGCCGCCTTTCCTANTAGTGTTCGC
 
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rJMFF038E20+          CGGAGACCTAGCCCCAATTGAACACCGGTGGAACCAGCACGGCTTAGGCGGNGACAATGT
rJMFF031E16+          CGGAGACCTAGCCCCAATTGAACCCCGGNGGAACCAGCNCGGNTTAGGNGGNGACAATGT
                      ____________________________________________________________
consensus             CGGAGACCTAGCCCCAATTGAACCCCGGTGGAACCAGCACGGCTTAGGCGGNGACAATGT
 
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rJMFF038E20+          TAGAGGAAGCTGCCGCGACCTCCACCCTGGTCCGGTGAGCCTTTTGCACTGGAGCGGCAG
rJMFF031E16+          TAGAGGAAGCTGCCGNGACCTCCNCCCTGGTCCGGNGAGCCTTTTGCNCTGGAGCGGCAG
                      ____________________________________________________________
consensus             TAGAGGAAGCTGCCGCGACCTCCACCCTGGTCCGGTGAGCCTTTTGCACTGGAGCGGCAG
 
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rJMFF038E20+          CGGCAAGCCCTGGCTCCGACTCGACTNTAACAAACCCTGCCCGCTTGATTNTNTATGGTC
rJMFF031E16+          CGGCAAGCCCTGGNTCCGACTNGACTTTAACAAACCCTGCCCGCTTGATTTTTTATGGTC
rJMFF027P10+                                     TAACAAACCCTGCCCGCTTGNTTNTTTNTGGTC
                      ____________________________________________________________
consensus             CGGCAAGCCCTGGCTCCGACTCGACTTTAACAAACCCTGCCCGCTTGATTTTTTATGGTC
 
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rJMFF038E20+          ACCCTACGACCTTTACGGACATTNTACCTGAATTTCTCGCCGGTAAATTAACTTCTTTTT
rJMFF031E16+          NCCCTNCGACCTTTACGGACATTTTACCTGAATTTTTNNCCGGTAAANTAACTTNTTTTT
rJMFF027P10+          CCCCTNCGACCTTTNCGGACATTTTNCCTGAATTTTTCNCCGGTAAANTAACTTNTTTTT
                      ____________________________________________________________
consensus             CCCCTACGACCTTTACGGACATTTTACCTGAATTTTTCGCCGGTAAATTAACTTCTTTTT
 
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rJMFF038E20+          TCTATATGGTTTCATTATTTTTATCTTCCATTTTTTTTTTT                   
rJMFF031E16+          TNTATANGGTTTCANTATTTTTATNTTCATTTTTTTTTTTTTAAATTATTTTTACATTTG
rJMFF027P10+          TNTATANGGTTTCANTATTTTTATNTTCANTTTTTTTTTTTTAAATTATTTTTACATTTG
                      ____________________________________________________________
consensus             TCTATATGGTTTCATTATTTTTATCTTCATTTTTTTTTTTTTAAATTATTTTTACATTTG
 
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rJMFF031E16+          AAGAAACTTCTCTTATATTAACATAATCGCCATTGTAATGATCACTTGGAGGGTTGGGAG
rJMFF027P10+          AAGAAACTTCTCTTATATTAACATAATCGCCATTGTAATGATCACTTGGAGGGTTGGGAG
                      ____________________________________________________________
consensus             AAGAAACTTCTCTTATATTAACATAATCGCCATTGTAATGATCACTTGGAGGGTTGGGAG
 
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rJMFF031E16+          GGGATTTGTATTCTATTTCATTATTTCCT                               
rJMFF027P10+          GGGATTTGTATTCTATTTCATTATTTCCTGTGAAATAAAAGGTGACAAATTCAATTTAAA
                      ____________________________________________________________
consensus             GGGATTTGTATTCTATTTCATTATTTCCTGTGAAATAAAAGGTGACAAATTCAATTTAAA
 
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rJMFF027P10+          AGTTTAAAACGGCCCCCTGTTTTTCATGTCTATATATTTTATTGATTGTTGTAATGTTGT
                      ____________________________________________________________
consensus             AGTTTAAAACGGCCCCCTGTTTTTCATGTCTATATATTTTATTGATTGTTGTAATGTTGT
 
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rJMFF027P10+          CCAATAGTAGTCTATACTTTATAGAATGCCTCCCACATGGTTGCTCGGGAGGTCATTTCT
                      ____________________________________________________________
consensus             CCAATAGTAGTCTATACTTTATAGAATGCCTCCCACATGGTTGCTCGGGAGGTCATTTCT
 
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rJMFF027P10+          GAGTCAGGTTGTGGGGGAGTAATTTGATATTTTTTCATCTTTTCTTGTAAACTGCCTTTC
                      ____________________________________________________________
consensus             GAGTCAGGTTGTGGGGGAGTAATTTGATATTTTTTCATCTTTTCTTGTAAACTGCCTTTC