| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF027A21 | Sequence | 593 | 008069 (4) | ref|XP_009599680.1| | 5e-21 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Nicotiana tomentosifo | 749 | 011078 (3) | ref|XP_004240475.1| | 1e-27 | PREDICTED: histone-lysine N-methyltransferase SUVR2 [Solanum lycopersicum] ref| |
| JMSF030M08 | Sequence | 655 | 008069 (4) | ref|XP_009599680.1| | 2e-22 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Nicotiana tomentosifo | 735 | 011078 (3) | ref|XP_009599680.1| | 3e-27 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Nicotiana tomentosifo |
| JMSF048F01 | Sequence | 645 | 008069 (4) | ref|XP_009599680.1| | 7e-21 | PREDICTED: histone-lysine N-methyltransferase SUVR2-like [Nicotiana tomentosifo | 755 | 011078 (3) | ref|XP_004240475.1| | 1e-27 | PREDICTED: histone-lysine N-methyltransferase SUVR2 [Solanum lycopersicum] ref| |
This contig is upended
. : . : . : . : . : . :
rJMSF048F01+ AAGGAAGTTCTATCTCCTCAAATCATGTCTGCTAAAAAGCCAAGCA
rJMSF030M08+ CAAATCATGTCTGCTAAAAAGCCAAGCA
rJMFF027A21+ CAAATCATGTCTGCTAAAAAGCCAAGCA
____________________________________________________________
consensus AAGGAAGTTCTATCTCCTCAAATCATGTCTGCTAAAAAGCCAAGCA
. : . : . : . : . : . :
rJMSF048F01+ GTGAGCCTAGCAATGCACAGTCATCCAAAAAGAAATTTCATGCATTGATCAAACCTAAAG
rJMSF030M08+ GTGAGCCTAGCAATGCACAGTCATCCAAAAAGAAATTTCATGCATTGATCAAACCTAAAG
rJMFF027A21+ GTGAGCCTAGCAATGCACAGTCATCCAAAAAGAAATTTCATGCATTGATCAAACCTAAAG
____________________________________________________________
consensus GTGAGCCTAGCAATGCACAGTCATCCAAAAAGAAATTTCATGCATTGATCAAACCTAAAG
. : . : . : . : . : . :
rJMSF048F01+ AAGAGCCGGTCACTGGAGGCATGCACCAAGAAGTTCCTGTTTCAGGCACTCATGCAGTGT
rJMSF030M08+ AAGAGCCGGTCACTGGAGGCATGCACCAAGAAGTTCCTGTTTCAGGCACTCATGCAGTGT
rJMFF027A21+ AAGAGCCGGTCACTGGAGGCATGCACCAAGAAGTTCCTGTTTCAGGCACTCATGCAGTGT
____________________________________________________________
consensus AAGAGCCGGTCACTGGAGGCATGCACCAAGAAGTTCCTGTTTCAGGCACTCATGCAGTGT
. : . : . : . : . : . :
rJMSF048F01+ CAGCAAAGAAAGGTGGATCATCAAATGCAAATGGTTCGATCGGGAATGAGGATCATCCTT
rJMSF030M08+ CAGCAAAGAAAGGTGGATCATCAAATGCAAATGGTTCGATCGGGAATGAGGATCATCCTT
rJMFF027A21+ CAGCAAAGAAAGGTGGATCATCAAATGCAAATGGTTCGATCGGGAATGAGGATCATCCTT
____________________________________________________________
consensus CAGCAAAGAAAGGTGGATCATCAAATGCAAATGGTTCGATCGGGAATGAGGATCATCCTT
. : . : . : . : . : . :
rJMSF048F01+ TAGATCCGAAGATGCAATCCGGAGCTACACTAGATTTAGCTCTATCAAGCGAAGCAAGAG
rJMSF030M08+ TAGATCCGAAGATGCAATCCGGAGCTACACTAGATTTAGCTCTATCAAGCGAAGCAAGAG
rJMFF027A21+ TAGATCCGAAGATGCAATCCGGAGCTACACTAGATTTAGCTCTATCAAGCGAAGCAAGAG
____________________________________________________________
consensus TAGATCCGAAGATGCAATCCGGAGCTACACTAGATTTAGCTCTATCAAGCGAAGCAAGAG
. : . : . : . : . : . :
rJMSF048F01+ CCAATGATAAGCTGGAGGTAGCTTCCTCAACCTCTGGAGAGGTGAAAGTGATTCTGAACT
rJMSF030M08+ CCAATGATAAGCTGGAGGTAGCTTCCTCAACCTCTGGAGAGGTGAAAGTGATTCTGAACT
rJMFF027A21+ CCAATGATAAGCTGGAGGTAGCTTCCTCAACCTCTGGAGAGGTGAAAGTGATTCTGAACT
____________________________________________________________
consensus CCAATGATAAGCTGGAGGTAGCTTCCTCAACCTCTGGAGAGGTGAAAGTGATTCTGAACT
. : . : . : . : . : . :
rJMSF048F01+ GTAGCGCAGTTCTAGGAAGACCCAACTTTGAGATGCCTAGCCTAGATGCAGTGGTGAAGT
rJMSF030M08+ GTAGCGCAGTTCTAGGAAGACCCAACTTTGAGATGCCTAGCCTAGATGCAGTGGTGAAGT
rJMFF027A21+ GTAGCGCAGTTCTAGGAAGACCCAACTTTGAGATGCCTAGCCTAGATGCAGTGGTGAAGT
____________________________________________________________
consensus GTAGCGCAGTTCTAGGAAGACCCAACTTTGAGATGCCTAGCCTAGATGCAGTGGTGAAGT
. : . : . : . : . : . :
rJMSF048F01+ TGATGGAGGAGAAGTGTCTGAGTGAGTACAAAGATGTCGACCCAAAATTTTCCGTGATAA
rJMSF030M08+ TGATGGAGGAGAAGTGTCTGAGTAAGTACAAAGATGTCGACCCAAAATTTTCCGTGATAA
rJMFF027A21+ TGATGGAGGAGAAGTGTCTGAGTGAGTACAAAGATGTCGACCCAAAATTTTCCGTGATAA
____________________________________________________________
consensus TGATGGAGGAGAAGTGTCTGAGTGAGTACAAAGATGTCGACCCAAAATTTTCCGTGATAA
. : . : . : . : . : . :
rJMSF048F01+ AAGTAATGCAAGATGTTTGCGAGTGCTTCTTGGAGTTGCGTGCTCAATCTTCCATCGCTT
rJMSF030M08+ AAGTAATGCAAGATGTTTGCGAGTGCTTCTTGGAGTTGCGTGCTCAATCTTCCATCGCTT
rJMFF027A21+ AAGTAATGCAAGATGTTTGCGAGTGCTTCTTGGAGTTGCGTGCTCAATCTTCCATCGCTT
____________________________________________________________
consensus AAGTAATGCAAGATGTTTGCGAGTGCTTCTTGGAGTTGCGTGCTCAATCTTCCATCGCTT
. : . : . : . : . : . :
rJMSF048F01+ CAGAAGCAACAAGAGATGAGTAGTAGGAAGGTGCACTGCGAAAATGGCAAACTTATTATT
rJMSF030M08+ CAGAAGCAACAAGAGATGAGTAGTAGGAAGGTGCACTGCGAAAATGGCAAACTTATTATT
rJMFF027A21+ CAGAAGCAACAAGAGATGAGTAGTAGGAAGGTGCACTGCGAAAATGGCAAACTTATTATT
____________________________________________________________
consensus CAGAAGCAACAAGAGATGAGTAGTAGGAAGGTGCACTGCGAAAATGGCAAACTTATTATT
. : . : . : . : . : . :
rJMSF048F01+ CTTTTATAAAGACTTTGCTGTCAGGGAATGTTGGCTAAATATGTAGATGTTTCAAGTTTT
rJMSF030M08+ CTTTTATAAAGACTTTGCTGTCAGGGAATGTTGGCTAAATATGTAGATGTTTCAAGTTTT
rJMFF027A21+ CTTTTATAAAGACTTTGCTGTCAGGGAATGTTGGCTAAATATGTAGATGTTTCAAGTTTT
____________________________________________________________
consensus CTTTTATAAAGACTTTGCTGTCAGGGAATGTTGGCTAAATATGTAGATGTTTCAAGTTTT
. : . : . : . : . : . :
rJMSF048F01+ CTTTCTACATTAGCCATACCATCTTTTATGGTGTATCTTTGTAACCTAAAAAGAGCATGT
rJMSF030M08+ CTTTCTACATTAGCCATACCATCTTTTATGGTGTATCTTTGTAACCTAAAAAGAGCATGT
rJMFF027A21+ CTTTCTACATTAGCCATACCATCTTTTATGGTGTATCTTTGTAACCTAAAAAGAGCATGT
____________________________________________________________
consensus CTTTCTACATTAGCCATACCATCTTTTATGGTGTATCTTTGTAACCTAAAAAGAGCATGT
. : . : . : . : . : . :
rJMSF048F01+ CTCTTGTACTTTCACAGTTGGGTGGGCAGAGCCTTGTAGTGCACTGC
rJMSF030M08+ CTCTTGTACTTTCACAGTTGGGTGGGCAGAGCCTTGTAGTGCACTGC
rJMFF027A21+ CTCTTGTACTTTCACAGTTGGGTGGGCAGAGCCTTGTAGTGCACTGCTTGGTTGCACTCC
____________________________________________________________
consensus CTCTTGTACTTTCACAGTTGGGTGGGCAGAGCCTTGTAGTGCACTGCTTGGTTGCACTCC