Contig 011077:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+                                    GAAAATGGTGTGCGGGATGGGGCAAGGGGAAGTT
                      ____________________________________________________________
consensus                                       GAAAATGGTGTGCGGGATGGGGCAAGGGGAAGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GGGGTATGTCTTNCCTCATCGGATAGAGGTGGAGGTCGAGGATATGACCGTGACTCCCGT
                      ____________________________________________________________
consensus             GGGGTATGTCTTNCCTCATCGGATAGAGGTGGAGGTCGAGGATATGACCGTGACTCCCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GACAGACATGGTCAAGGCTCTCGTGATGCAGATAGTTTTGGTAGCTACCATTCTCGCAAC
rJMFF026G09+                      CAAGGCTCTCGTGATGCAGATAGTTTTGGTAGCTACCATTCTCGCAAC
                      ____________________________________________________________
consensus             GACAGACATGGTCAAGGCTCTCGTGATGCAGATAGTTTTGGTAGCTACCATTCTCGCAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          TTTAATGATAGTGTTGTACACGCTTCAGACAAACATGGTCGCAGTCAGAGCAGAAGCCCT
rJMFF026G09+          TTTAATGATAGTGTTGTACACGCTTCAGACAAACATGGTCGCAGTCAGAGCAGAAGCCCT
                      ____________________________________________________________
consensus             TTTAATGATAGTGTTGTACACGCTTCAGACAAACATGGTCGCAGTCAGAGCAGAAGCCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GTTAGGGCTTCTGGATGGAGCGGTGACAACAGGAGCCGGGGCCGCAGTCGGAGCCGTAGT
rJMFF026G09+          GTTAGGGCTTCTGGATGGAGCGGTGACAACAGGAGCCGGGGCCGCAGTCGGAGCCGTAGT
                      ____________________________________________________________
consensus             GTTAGGGCTTCTGGATGGAGCGGTGACAACAGGAGCCGGGGCCGCAGTCGGAGCCGTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GTTGAGAGGTTTAATCGATCTAATCCTTCCCGTGAAGGTCCCACAGGACGCAGTTTCCAG
rJMFF026G09+          GTTGAGAGGTTTAATCGATCTAATCCTTCCCGTGAAGGTCCCACAGGACGCAGTTTCCAG
                      ____________________________________________________________
consensus             GTTGAGAGGTTTAATCGATCTAATCCTTCCCGTGAAGGTCCCACAGGACGCAGTTTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GAGGCAGTGATACCCAGGGCAGGAACATCCTCAGTTGCCTTAAAGCAGAGATCGCCACCT
rJMFF026G09+          GAGGCAGTGATACCCAGGGCAGGAACATCCTCAGTTGCCTTAAAGCAGAGATCGCCACCT
                      ____________________________________________________________
consensus             GAGGCAGTGATACCCAGGGCAGGAACATCCTCAGTTGCCTTAAAGCAGAGATCGCCACCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          TATGATAGTGAGAACCTGAGAAGATCATATGCTAATGGTCAAAAGGACTGCGAAAGATCT
rJMFF026G09+          TATGATAGTGAGAACCTGAGAAGATCATATGCTAATGGTCAAAAGGACTGCGAAAGATCT
                      ____________________________________________________________
consensus             TATGATAGTGAGAACCTGAGAAGATCATATGCTAATGGTCAAAAGGACTGCGAAAGATCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          CCTCCACTCAAGGGGCAAAGTAACAGAGAGTACGCTAATGGATCTCATCAAACTTGTCGG
rJMFF026G09+          CCTCCACTCAAGGGGCAAAGTAACAGAGAGTACGCTAATGGATCTCATCAAACTTGTCGG
                      ____________________________________________________________
consensus             CCTCCACTCAAGGGGCAAAGTAACAGAGAGTACGCTAATGGATCTCATCAAACTTGTCGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GAGGAGGAAGAGGAAGGCATAATTCGTCCCGAGGAAGATGGCACTTACCAAGCTGCTTGA
rJMFF026G09+          GAGGAGGAAGAGGAAGGCATAATTCGTCCCGAGGAAGATGGCACTTACCAAGCTGCTTGA
                      ____________________________________________________________
consensus             GAGGAGGAAGAGGAAGGCATAATTCGTCCCGAGGAAGATGGCACTTACCAAGCTGCTTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GAATCCTCGTTAACATCCAGTAGAATTGATTGAAGTGCCTAGTGGGTGTTGGAGGGAGAT
rJMFF026G09+          GAATCCTCGTTAACATCCAGTAGAATTGATTGAAGTGCCTAGTGGGTGTTGGAGGGAGAT
                      ____________________________________________________________
consensus             GAATCCTCGTTAACATCCAGTAGAATTGATTGAAGTGCCTAGTGGGTGTTGGAGGGAGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GGGCATGTCTGTTTTCTTGGCTTGCCTTTATTGTTTTAGTGCATTTGCATACTATACTTG
rJMFF026G09+          GGGCATGTCTGTTTTCTTGGCTTGCCTTTATTGTTTTAGTGCATTTGCATACTATACTTG
                      ____________________________________________________________
consensus             GGGCATGTCTGTTTTCTTGGCTTGCCTTTATTGTTTTAGTGCATTTGCATACTATACTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          CATGCATATTGTAGTAGTTCATCTTTGGTAGAGACTTGGGCTGAACTCTGAAGTGAAAGA
rJMFF026G09+          CATGCATATTGTAGTAGTTCATCTTTGGTAGAGACTTGGGCTGAACTCTGAAGTGAAAGA
                      ____________________________________________________________
consensus             CATGCATATTGTAGTAGTTCATCTTTGGTAGAGACTTGGGCTGAACTCTGAAGTGAAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          GGACCTTGAATGGGTTACTATCCCCTGTAACAGTAGTTTTTACTCTTGCTGTGTTGACAT
rJMFF026G09+          GGACCTTGAATGGGTTACTATCCCCTGTAACAGTAGTTTTTACTCTTGCTGTGTTGACAT
                      ____________________________________________________________
consensus             GGACCTTGAATGGGTTACTATCCCCTGTAACAGTAGTTTTTACTCTTGCTGTGTTGACAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF039O04+          TGTCTANCTATGTGTTTATAGATAGAATTGGA                            
rJMFF026G09+          TGTCTA-CTATGTGTTTATAGATAGAATTGGACTGTAAGAAACAGATAGTGACGATAATG
                      ____________________________________________________________
consensus             TGTCTANCTATGTGTTTATAGATAGAATTGGACTGTAAGAAACAGATAGTGACGATAATG