Contig 011072:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF003C15+                                                CTGTTACTGTGACTTACCTGTT
                      ____________________________________________________________
consensus                                                   CTGTTACTGTGACTTACCTGTT
 
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rJMSF003C15+          CATTGCAAAACCAGCTGGGAATAAGAATGAAAGCCAAAGCTCTGAACAAGGCTACACCAG
rJMFF025G14+                AAAACAAGCTGGGAATAAGAATGAAAGCCAAAGCTCTGAACAAGGCTACACCAG
                      ____________________________________________________________
consensus             CATTGCAAAACCAGCTGGGAATAAGAATGAAAGCCAAAGCTCTGAACAAGGCTACACCAG
 
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rJMSF003C15+          TGAATCTAGCCTCACATACCTACTGGAATCTTGGTGGCCATGACAGTGGTGATATCTTGT
rJMFF025G14+          TGAATCTAGCCTCACATACNTACTGGAATCTTGGTGGCCATGACAGTGGTGATATCTTGT
                      ____________________________________________________________
consensus             TGAATCTAGCCTCACATACCTACTGGAATCTTGGTGGCCATGACAGTGGTGATATCTTGT
 
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rJMSF003C15+          CGCATACTATCCAGCTCTTCTGTTCCAAGATCACTCCTGTGGATGAAAAGCTCATCCCCA
rJMFF025G14+          CGCATACTATCCAGCTCTTCTGTTCCAAGATCACTCCTGTGGATGAAAAGCTCATCCCCA
                      ____________________________________________________________
consensus             CGCATACTATCCAGCTCTTCTGTTCCAAGATCACTCCTGTGGATGAAAAGCTCATCCCCA
 
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rJMSF003C15+          CTGGTGCCATTTCACCGGTGAAAGGGACAGCGTTTGATTTCCTGCAGGCACGGGCTATAG
rJMFF025G14+          CTGGTGCCATTTCACCGGTGAAAGGGACAGCGTTTGATTTCCTGCAGGCACGGGCTATAG
                      ____________________________________________________________
consensus             CTGGTGCCATTTCACCGGTGAAAGGGACAGCGTTTGATTTCCTGCAGGCACGGGCTATAG
 
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rJMSF003C15+          GGAGCGAGTTGAATGAGCTTCCGGGTGGATATGATATAAACTATGTTTTGGACAGCCATG
rJMFF025G14+          GGAGCGAGTTGAATGAGCTTCCGGGTGGATATGATATAAACTATGTTTTGGACAGCCATG
                      ____________________________________________________________
consensus             GGAGCGAGTTGAATGAGCTTCCGGGTGGATATGATATAAACTATGTTTTGGACAGCCATG
 
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rJMSF003C15+          GTTTGAAGCATCTGGGCAAGGCTGCTGTGGTGGTAGACAGCAAGTCGGGTAGAAAAATGG
rJMFF025G14+          GTTTGAAGCATCTGGGCAAGGCTGCTGTGGTGGTAGACAGCAAGTCGGGTAGAAAAATGG
                      ____________________________________________________________
consensus             GTTTGAAGCATCTGGGCAAGGCTGCTGTGGTGGTAGACAGCAAGTCGGGTAGAAAAATGG
 
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rJMSF003C15+          AGCTGTGGACTAACAAGCCTGGTGTTCAGTTTTACACGAGTAATATGTTGACAGATACAA
rJMFF025G14+          AGCTGTGGACTAACAAGCCTGGTGTTCAGTTTTACACGAGTAATATGTTGACAGATACAA
                      ____________________________________________________________
consensus             AGCTGTGGACTAACAAGCCTGGTGTTCAGTTTTACACGAGTAATATGTTGACAGATACAA
 
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rJMSF003C15+          AGGGGAAAGGCGGATATGTTTACAAAAAACACGCTGCATTGTGCTTGGAGACGCAAGGCT
rJMFF025G14+          AGGGGAAAGGCGGATATGTTTACAAAAAACACGCTGCGTTGTGCTTGGAGACGCAAGGCT
                      ____________________________________________________________
consensus             AGGGGAAAGGCGGATATGTTTACAAAAAACACGCTGCGTTGTGCTTGGAGACGCAAGGCT
 
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rJMSF003C15+          TTCCAGATTCTGTGAACTTCCCGAATTTCCCTTCCCAGATTGTGAATCCGGGTGAGACTT
rJMFF025G14+          TTCCAGATTCTGTGAACTTCCCGAATTTCCCTTCCCAGATTGTGAATCCGGGTGAGACTT
                      ____________________________________________________________
consensus             TTCCAGATTCTGTGAACTTCCCGAATTTCCCTTCCCAGATTGTGAATCCGGGTGAGACTT
 
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rJMSF003C15+          ATGACCATGTTATGGTTTACCGGTTCACTACTCATGATGCCTCCCACACCGGCTACTGAT
rJMFF025G14+          ATGACCATGTTATGGTTTACCGGTTCACTACTCATGATGCCTCCCACACCGGCTACTGAT
                      ____________________________________________________________
consensus             ATGACCATGTTATGGTTTACCGGTTCACTACTCATGATGCCTCCCACACCGGCTACTGAT
 
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rJMSF003C15+          AGGGATCCAACGCAATATAAAACCTACGCAAGTTAGTTTTTGTCGGGTAATTATGATCTA
rJMFF025G14+          AGGGATCCAACGCAATATAAAACCTACGCAAGTTAGTTTTTGTCGGGTAATTATGATCTA
                      ____________________________________________________________
consensus             AGGGATCCAACGCAATATAAAACCTACGCAAGTTAGTTTTTGTCGGGTAATTATGATCTA
 
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rJMSF003C15+          GGGACAGAGGCAATAGTACTTCATCTAAATTCAGCTTTCTTGGGTCCTTTTGTTAGTGGG
rJMFF025G14+          GGGACAGAGGCAATAGTACTTCATCTAAATTCAGCTTTCTTGGGTCCTTTTGTTAGTGGG
                      ____________________________________________________________
consensus             GGGACAGAGGCAATAGTACTTCATCTAAATTCAGCTTTCTTGGGTCCTTTTGTTAGTGGG
 
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rJMSF003C15+          AAAGGGTGAAGCAAATTGCTTTGTTGTGTGTATCCAATAAAAGTGTA             
rJMFF025G14+          AAAGGGTGAAGCAAATTGCTTTGTTGTGTGTATCCAATAAAAGTGTAGGGTCAAGCAATT
                      ____________________________________________________________
consensus             AAAGGGTGAAGCAAATTGCTTTGTTGTGTGTATCCAATAAAAGTGTAGGGTCAAGCAATT