Contig 011071:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025F22Sequence569007431 (2)ref|XP_004246645.1|3e-66PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum 764011071 (2)ref|XP_011094637.1|5e-50PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Sesamum
JMFF035H08Sequence571007431 (2)ref|XP_004246645.1|3e-66PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum 682011071 (2)ref|XP_011094636.1|6e-31PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Sesamum

Alignment

This contig is upended


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rJMFF025F22+                          CACGATGTGTGGAGCTACGGGATGTTCCTCTACGAGCTCATCAC
                      ____________________________________________________________
consensus                             CACGATGTGTGGAGCTACGGGATGTTCCTCTACGAGCTCATCAC
 
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rJMFF035H08+                                           GAACGAGCAGAAGCTCTTGGACTGGGT
rJMFF025F22+          GGGCAGGCGGCCATTGGATCGCAATCGTCCCAAGAACGAGCAGAAGCTCTTGGACTGGGT
                      ____________________________________________________________
consensus             GGGCAGGCGGCCATTGGATCGCAATCGTCCCAAGAACGAGCAGAAGCTCTTGGACTGGGT
 
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rJMFF035H08+          AAAGCCACACACAACAGATCCTAAGAAGTTTAGGAAGATATTAGACCCGAGACTTGAAGG
rJMFF025F22+          AAAGCCACACACAACAGATCCTAAGAAGTTTAGGAAGATATTAGACCCGAGACTTGAAGG
                      ____________________________________________________________
consensus             AAAGCCACACACAACAGATCCTAAGAAGTTTAGGAAGATATTAGACCCGAGACTTGAAGG
 
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rJMFF035H08+          GAATGTCTTAAGATCAGCTCACAAGCTCTCTCTTATTGCCAACCGCTGTTTAGTCAAGCA
rJMFF025F22+          GAATGTCTTAAGATCAGCTCACAAGCTCTCTCTTATTGCCAACCGCTGTTTAGTCAAGCA
                      ____________________________________________________________
consensus             GAATGTCTTAAGATCAGCTCACAAGCTCTCTCTTATTGCCAACCGCTGTTTAGTCAAGCA
 
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rJMFF035H08+          CCCAAAGTCACGTCCGACAATGAGCGAAGTCCTGGAAATGGTGAGCAATGTTGTCGAAGC
rJMFF025F22+          CCCAAAGTCACGTCCGACAATGAGCGAAGTCCTGGAAATGGTGAGCAATGTTGTCGAAGC
                      ____________________________________________________________
consensus             CCCAAAGTCACGTCCGACAATGAGCGAAGTCCTGGAAATGGTGAGCAATGTTGTCGAAGC
 
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rJMFF035H08+          GCCAGCGGGAATGGGGAATCCTAGACCGGCTATAAAATCCCCCGAACCCGTTCGTGCTAA
rJMFF025F22+          GCCAGCGGGAATGGGGAATCCTAGACCGGCTATAAAATCCCCCGAACCCGTTCGTGCTAA
                      ____________________________________________________________
consensus             GCCAGCGGGAATGGGGAATCCTAGACCGGCTATAAAATCCCCCGAACCCGTTCGTGCTAA
 
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rJMFF035H08+          AGAAGGAACTGAGAGAAAAGGTAAAAGAAGGATCATTAATATCAGAATTGGAGATAGTGG
rJMFF025F22+          AGAAGGAACTGAGAGAAAAGGTAAAAGAAGGATCATTAATATCAGAATTGGAGATAGTGG
                      ____________________________________________________________
consensus             AGAAGGAACTGAGAGAAAAGGTAAAAGAAGGATCATTAATATCAGAATTGGAGATAGTGG
 
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rJMFF035H08+          GTGGTTGGTTCGTATACTGTCGCTAAAACGTGCTAAGATGAACTCCTGATTGTTGCTGCA
rJMFF025F22+          GTGGTTGGTTCGTATACTGTCGCTAAAACGTGCTAAGATGAACTCCTGATTGTTGCTGCA
                      ____________________________________________________________
consensus             GTGGTTGGTTCGTATACTGTCGCTAAAACGTGCTAAGATGAACTCCTGATTGTTGCTGCA
 
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rJMFF035H08+          TTTGCATAACATGGAAGAACACTTAACTCTAGACGACTTCCCTTTAGGCGCCGCCCTTGA
rJMFF025F22+          TTTGCATAACATGGAAGAACACTTAACTCTAGACGACTTCCCTTTAGGCGCCGCCCTTGA
                      ____________________________________________________________
consensus             TTTGCATAACATGGAAGAACACTTAACTCTAGACGACTTCCCTTTAGGCGCCGCCCTTGA
 
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rJMFF035H08+          TAACAGTAGTGATCCTCAGCAGTGTGCAGAATCTCCACAAAGAAAAGCTTGCACTTTGTT
rJMFF025F22+          TAACAGTAGTGATCCTCAGCAGTGTGCAGAATCTCCACAAAGAAAAGCTTGCACTTTGTT
                      ____________________________________________________________
consensus             TAACAGTAGTGATCCTCAGCAGTGTGCAGAATCTCCACAAAGAAAAGCTTGCACTTTGTT
 
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rJMFF035H08+          AGCAGATTCTGAAGCTTTTGCAGATATATATGCAGAATGTGTAATGGTTTCTGTTAGTGG
rJMFF025F22+          AGCAGATTCTGAAGCTTTTGCAGATATATATGCAGAATGTGTAATGGTTTCTGTTAGTGG
                      ____________________________________________________________
consensus             AGCAGATTCTGAAGCTTTTGCAGATATATATGCAGAATGTGTAATGGTTTCTGTTAGTGG
 
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rJMFF035H08+          CTTTCATCTTTTCAAGCTTGGTGTTGAGATGAAAAACATTGTTAATTCTTGTACTGCCTG
rJMFF025F22+          CTTTCATCTTTTCAAGCTTGGTGTTGAGATGAAAAACATTGTTAATTCTTGTACTGCCTG
                      ____________________________________________________________
consensus             CTTTCATCTTTTCAAGCTTGGTGTTGAGATGAAAAACATTGTTAATTCTTGTACTGCCTG
 
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rJMFF035H08+          CAAACTGCAGAATTTTGTGAGATTTTGTACTCCATAAAACAAGAAATGA           
rJMFF025F22+          CAAACTGCAGAATTTTGTGAGATTTTGTACTCCATAAAACAAGAAATGAGAAAATATATG
                      ____________________________________________________________
consensus             CAAACTGCAGAATTTTGTGAGATTTTGTACTCCATAAAACAAGAAATGAGAAAATATATG