| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025A21 | Sequence | 665 | 003569 (5) | gb|KJB42837.1| | 8e-76 | hypothetical protein B456_007G169700 [Gossypium raimondii] | 698 | 011070 (5) | ref|XP_010913398.1| | 313 | PREDICTED: protein disulfide isomerase-like 2-3 [Elaeis guineensis] |
| JMSF004L17 | Sequence | 404 | 001657 (14) | gb|KDO49337.1| | 2e-54 | hypothetical protein CISIN_1g0036232mg, partial [Citrus sinensis] gb|KDO49338.1| | 329 | 011070 (5) | ref|XP_004491086.1| | 1e-27 | PREDICTED: protein disulfide isomerase-like 2-3-like [Cicer arietinum] |
| JMSF007O14 | Sequence | 214 | 003569 (5) | 780 | 011070 (5) | ref|XP_010913398.1| | 372 | PREDICTED: protein disulfide isomerase-like 2-3 [Elaeis guineensis] | |||
| JMSF009H05 | Sequence | 369 | 003569 (5) | ref|XP_011003479.1| | 137 | PREDICTED: protein disulfide isomerase-like 2-3 [Populus euphratica] | 778 | 011070 (5) | ref|XP_010913398.1| | 370 | PREDICTED: protein disulfide isomerase-like 2-3 [Elaeis guineensis] |
| JMSF046B04 | Sequence | 661 | 003569 (5) | gb|KJB42837.1| | 2e-89 | hypothetical protein B456_007G169700 [Gossypium raimondii] | 590 | 011070 (5) | ref|XP_004491086.1| | 2e-67 | PREDICTED: protein disulfide isomerase-like 2-3-like [Cicer arietinum] |
This contig is upended
. : . : . : . : . : . :
rJMSF007O14+ AGACTGTGATGC
rJMSF009H05+ CTGTGATGC
____________________________________________________________
consensus AGACTGTGATGC
. : . : . : . : . : . :
rJMSF007O14+ AGAGAAGTCTCTGATGAGCAGGTTCAGTGTCCAAGGGTTCCCTACAATTTTGGTATTTGG
rJMSF009H05+ AGAGAAGTCTCTGATGAGCAGGTTCAGTGTCCAAGGGTTCCCTACAATTTTGGTATTTGG
____________________________________________________________
consensus AGAGAAGTCTCTGATGAGCAGGTTCAGTGTCCAAGGGTTCCCTACAATTTTGGTATTTGG
. : . : . : . : . : . :
rJMSF007O14+ TGCTGACAAGGACCATCCTGTACCTTATAATGGTGCAAGGACTGCCTCTGCAATTGAATC
rJMSF009H05+ TGCTGACAAGGACCATCCTGTACCTTATAATGGTGCAAGGACTGCCTCTGCAATTGAATC
rJMFF025A21+ TTATAATGGTGCAAGGACTGCCTCTGCAATTGAATC
____________________________________________________________
consensus TGCTGACAAGGACCATCCTGTACCTTATAATGGTGCAAGGACTGCCTCTGCAATTGAATC
. : . : . : . : . : . :
rJMSF007O14+ ATATGCACTAGAGCAGCTGGAGATAAATGTTTCTCCTCCTGAAGTAACTGAATTGACTGG
rJMSF009H05+ ATATGCACTAGAGCAGCTGGAGATAAATGTTTCTCCTCCTGAAGTAACTGAATTGACTGG
rJMSF046B04+ CTCCTGAAGTAACTGAATTGACTGG
rJMFF025A21+ ATATGCACTAGAGCAGCTGGAGATAAATGTTTCTCCTCCTGAAGTAACTGAATTGACTGG
____________________________________________________________
consensus ATATGCACTAGAGCAGCTGGAGATAAATGTTTCTCCTCCTGAAGTAACTGAATTGACTGG
. : . : . : . : . : . :
rJMSF007O14+ ACCGGATGTTATGGAAGAAAAATGTAGCTCTGCTGCTCTTTGC-TTTGTGGCATTTCTCC
rJMSF009H05+ ACCGGATGTTATGGAAGAAAAATGTAGCTCTGCTGCTCTTTGC-TTTGTGGCATTTCTCC
rJMSF046B04+ ACCGGATGTTATGGAAGAAAAATGTAGCTCTGCTGCTCTTTGCTTTTGTGGCATTTCTCC
rJMFF025A21+ ACCGGATGTTATGGAAGAAAAATGTAGCTCTGCTGCTCTTTGC-TTTGTGGCATTTCTCC
____________________________________________________________
consensus ACCGGATGTTATGGAAGAAAAATGTAGCTCTGCTGCTCTTTGC-TTTGTGGCATTTCTCC
. : . : . : . : . : . :
rJMSF007O14+ CTGACATTTTGGACTCCAAGGCAGAGGGAAGGAACAAATACCTTGAGACATTGTTATCTG
rJMSF009H05+ CTGATATTTTGGACTCCAAGGCAGAGGGAAGGAACAAATACCTTGAGACATTGTTATCTG
rJMSF046B04+ CTGACATTTTGGACTCCAAGGCAGAGGGAAGGAACAAATACCTTGAGACATTGTTATCTG
rJMFF025A21+ CTGACATTTTGGACTCCAAGGCAGAGGGAAGGAACAAATACCTTGAGACATTGTTATCTG
____________________________________________________________
consensus CTGACATTTTGGACTCCAAGGCAGAGGGAAGGAACAAATACCTTGAGACATTGTTATCTG
. : . : . : . : . : . :
rJMSF007O14+ TTGCTGAGAAGTTCAAAACGAAGCCCTACAGCTATGTTTGGGCTGCTGCCGGTAAGCAAC
rJMSF009H05+ TTGCTGAGAAGTTCAAAACGAAGCCCTACAGCTATGTTTGGGCTGCTGCCGGTAAGCAAC
rJMSF046B04+ TTGCTGAGAAGTTCAAAACGAAGCCCTACAGCTATGTTTGGGCTGCTGCCGGTAAGCAAC
rJMFF025A21+ TTGCTGAGAAGTTCAAAACGAAGCCCTACAGCTATGTTTGGGCTGCTGCCGGTAAGCAAC
____________________________________________________________
consensus TTGCTGAGAAGTTCAAAACGAAGCCCTACAGCTATGTTTGGGCTGCTGCCGGTAAGCAAC
. : . : . : . : . : . :
rJMSF007O14+ CAGATCTCGAGAAGCATGTTGGTGTTGGTGGCTATGGCTATCCTGCGCTAGTAGTCCTAA
rJMSF009H05+ CAGATCTCGAGAAGCATGTTGGTGTTGGTGGCTATGGCTATCCTGCGCTAGTAGTCCTAA
rJMSF046B04+ CAGATCTCGAGAAGCATGTTGGTGTTGGTGGCTATGGCTATCCTGCGCTAGTAGTCCTAA
rJMSF004L17+ TCCTAA
rJMFF025A21+ CAGATCTCGAGAAGCATGTTGGTGTTGGTGGCTATGGCTATCCTGCGCTAGTAGTCCTAA
____________________________________________________________
consensus CAGATCTCGAGAAGCATGTTGGTGTTGGTGGCTATGGCTATCCTGCGCTAGTAGTCCTAA
. : . : . : . : . : . :
rJMSF007O14+ GTGTTAAAAACCAAGTATATGCACCCCTTAAGAGTTCATTTCAACACGACCATATTAAAG
rJMSF009H05+ GTGTTAAAAACCAAGTATATGCACCCCTTAAGAGTTCATTTCAACACGACCATATTAAAG
rJMSF046B04+ GTGTTAAAAACCAAGTATATGCACCCCTTAAGAGTTCATTTCAACACGACCATATTAAAG
rJMSF004L17+ GTGTNANAANCCANGTATATGCACCCCTTAAGAGTTCATTTCAACACGACCATATTAAAG
rJMFF025A21+ GTGTTAAAAACCAAGTATATGCACCCCTTAAGAGTTCATTTCAACACGACCATATTAAAG
____________________________________________________________
consensus GTGTTAAAAACCAAGTATATGCACCCCTTAAGAGTTCATTTCAACACGACCATATTAAAG
. : . : . : . : . : . :
rJMSF007O14+ AGTTCGTGAGAGAAATTGGAGAATTAGGGGGTAGGGGAAGAAATTTGCCTTTAACTGGCA
rJMSF009H05+ AGTTCGTGAGAGAAATTGGAGAATTAGGGGGTAGGGGAAGAAATTTGCCTTTAACTGGCA
rJMSF046B04+ AGTTCGTGAGAGAAATTGGAGAATTAGGGGGTAGGGGAAGAAATTTGCCTTTAACTGGCA
rJMSF004L17+ AGTTCGTGAGAGAAATTGGAGAATTAGGGGGTAGGGGAAGAAATTTGCCTTTAACTGGCA
rJMFF025A21+ AGTTCGTGAGAGAAATTGGAGAATTAGGGGGTAGGGGAAGAAATTTGCCTTTAACTGGCA
____________________________________________________________
consensus AGTTCGTGAGAGAAATTGGAGAATTAGGGGGTAGGGGAAGAAATTTGCCTTTAACTGGCA
. : . : . : . : . : . :
rJMSF007O14+ CCCCTACAATTGTAAAGACCGAACCTTGGGACGGTAAAGATGGGGAAATCATGGAAGAGG
rJMSF009H05+ CCCCTACAATTGTAAAGACCGAACCTTGGGACGGTAAAGATGGGGAAATCATGGAAGAGG
rJMSF046B04+ CCCCTACAATTGTAAAGACCGAACCTTGGGACGGTAAAGATGGGGAAATCATGGAAGAGG
rJMSF004L17+ CCCNTACAATTGTAAAGACCGAACCTTGGGACGGTAAAGATGGGGAAATCATGGAAGAGG
rJMFF025A21+ CCCCTACAATTGTAAAGACCGAACCTTGGGACGGTAAAGATGGGGAAATCATGGAAGAGG
____________________________________________________________
consensus CCCCTACAATTGTAAAGACCGAACCTTGGGACGGTAAAGATGGGGAAATCATGGAAGAGG
. : . : . : . : . : . :
rJMSF007O14+ ATGAGTTTTCCCTTGAAGAACTTATGGGAGATGATACAGTTAACAAGGATGAATCTTAAA
rJMSF009H05+ ATGAGTTTTCCCTTGAAGAACTTATGGGAGATGATACAGTTAACAAGGATGAATCTTAAA
rJMSF046B04+ ATGAGTTTTCCCTTGAAGAACTTATGGGAGATGATACAGTTAACAAGGATGAATCTTAAA
rJMSF004L17+ ATGAGTTTTCCCTTGAAGAACTTATGGGAGATGATACAGTTAACAAGGATGAATCTTAAA
rJMFF025A21+ ATGAGTTTTCCCTTGAAGAACTTATGGGAGATGATACAGTTAACAAGGATGAATCTTAAA
____________________________________________________________
consensus ATGAGTTTTCCCTTGAAGAACTTATGGGAGATGATACAGTTAACAAGGATGAATCTTAAA
. : . : . : . : . : . :
rJMSF007O14+ CTTCAATACTTCCTCTTTCAACATTATAAAGAATGGTACTCTCTACTTTAAATTTTTGAG
rJMSF009H05+ CTTCGATACTTCCTCTTTCAACATTATAAAGAATGGTACTCTCTACTTTAAATTTTTGAG
rJMSF046B04+ CTTCAATACTTCCTCTTTCAACATTATAAAGAATGGTACTCTCTACTTTAAATTTTTGAG
rJMSF004L17+ CTTCAATACTTCCTCTTTCAACATTATAAAGAATGGTACTCTCTACTTTAAATTTTTGAG
rJMFF025A21+ CTTCAATACTTCCTCTTTCAACATTATAAAGAATGGTACTCTCTACTTTAAATTTTTGAG
____________________________________________________________
consensus CTTCAATACTTCCTCTTTCAACATTATAAAGAATGGTACTCTCTACTTTAAATTTTTGAG
. : . : . : . : . : . :
rJMSF007O14+ GATTTAACCAGGTTAGATAATGTGTTAATATCTTGTACCTAATCAAGTT
rJMSF009H05+ GATTTAACCAGGTTAGATAATGTGTTAATATCTTGTACTTAATCAAGTT
rJMSF046B04+ GATTTAA-C
rJMSF004L17+ GATTTAA-C
rJMFF025A21+ GATTTAA-CAGGTTAGATAATGTGTTAATATCTTGTACTTAATCAAGTTTTAAACATATT
____________________________________________________________
consensus GATTTAA-CAGGTTAGATAATGTGTTAATATCTTGTACTTAATCAAGTTTTAAACATATT