Contig 011068:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-                                                         TCATGGGAGGACAA
rJMFF024F20+                                                         CATGGGAGGACAA
                      ____________________________________________________________
consensus                                                           TCATGGGAGGACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           TGATCCACCTACAATCAAATGTCAGGACAGACATCACAACCCACAGTCATGGCTGGACAA
rJMFF024F20+          TGATCCACCTACANTCAAATGTCAGGACAGACATCACAACCCACAGTCATGGCTGGACAA
                      ____________________________________________________________
consensus             TGATCCACCTACAATCAAATGTCAGGACAGACATCACAACCCACAGTCATGGCTGGACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           GGAGTTTCTCAATTTTCTGGTCAGCCGTCAGGGTTTGCTCAGATGCCAGGACAGTCTGAG
rJMFF024F20+          GGAGTTTCTCAATTTTCTGGTCAGCCGTCAGGGTTTGCTCAGATGCCAGGACAGTNTGAG
                      ____________________________________________________________
consensus             GGAGTTTCTCAATTTTCTGGTCAGCCGTCAGGGTTTGCTCAGATGCCAGGACAGTCTGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           AGATATCCTCAATCAGCAGGACATACAACACCACCCGCCATGGGAGGACAAGGATCCACT
rJMFF024F20+          AGATATCCTCAATCAGCAGGACATACAACACCACCCGCCATGGGAGGACAAGGATCCACT
                      ____________________________________________________________
consensus             AGATATCCTCAATCAGCAGGACATACAACACCACCCGCCATGGGAGGACAAGGATCCACT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           TACAATCAAATGTCAGGACAGACCGAAAGACCTCACTGGGGATTTACGCCACCATCAAAT
rJMFF024F20+          TACAATCAAATGTCAGGACAGACCGAAAGACCTCACTGGGGATTTACGCCACCATCAAAT
                      ____________________________________________________________
consensus             TACAATCAAATGTCAGGACAGACCGAAAGACCTCACTGGGGATTTACGCCACCATCAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           GTCATGGGAGGACAGCCACATGCATTTAAACAAGGATCCAATTTCGAACAAATGTCAGGA
rJMFF024F20+          GTCATGGGAGGACAGCCACATGCATTTAAACAAGGATCCAATTTCGAACAAATGTCAGGA
                      ____________________________________________________________
consensus             GTCATGGGAGGACAGCCACATGCATTTAAACAAGGATCCAATTTCGAACAAATGTCAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           CAGACTGGAAGACCTCAATGGGGACAGACACCACCATCAAACTTCATGGGAGGTGAGCCA
rJMFF024F20+          CAGACTGGAAGACCTCAATGGGGACAGACACCACCATCAAACTTCATGGGAGGTGAGCCA
                      ____________________________________________________________
consensus             CAGACTGGAAGACCTCAATGGGGACAGACACCACCATCAAACTTCATGGGAGGTGAGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           CGTGCATCTGAACAAGTGCAGGGTCATAATGTAAGACCTCAGTTTACAGAACAGGCATCA
rJMFF024F20+          CGTGCATCTGAACAAGTGCAGGGTCATAATGTAAGACCTCAGTTTACAGAACAGGCATCA
                      ____________________________________________________________
consensus             CGTGCATCTGAACAAGTGCAGGGTCATAATGTAAGACCTCAGTTTACAGAACAGGCATCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           ACTCCCTATTTTATCGAACAGCAAGGTGAACAAATGTCAGGACAGACTGGAAGACCTCAA
rJMFF024F20+          ACTCCCTATTTTATCGAACAGCAAGGTGAACAAATGTCAGGACAGACTGGAAGACCTCAA
                      ____________________________________________________________
consensus             ACTCCCTATTTTATCGAACAGCAAGGTGAACAAATGTCAGGACAGACTGGAAGACCTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           TGGGGACATACACCAACATCAAACTTCATGGGANGTGAGCCACGTGCATATGAACAAGTG
rJMFF024F20+          TGGGGACATACACCAACATCAAACTTCATGGGAGGTGAGCCACGTGCATATGAACAAGTG
                      ____________________________________________________________
consensus             TGGGGACATACACCAACATCAAACTTCATGGGAGGTGAGCCACGTGCATATGAACAAGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           CAGGGGTCGTAATGTAAGACCTCAGTTTACAGAACAGGCATCACCCTCCCTACTTTATCG
rJMFF024F20+          CA-GGGTCGTAATGTAAGACCTCAGTTTACAGAACAGGCATCA-CCTCCCTACTTTATCG
                      ____________________________________________________________
consensus             CAGGGGTCGTAATGTAAGACCTCAGTTTACAGAACAGGCATCACCCTCCCTACTTTATCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF024F20-           AAACAGCAAGGTGGACAAAGGGCTTCAGGTCAGATTGTANGACCTCATGGGG        
rJMFF024F20+          -AACAGCAAGGTGGACAAAGGGCTTCAGGTCAGATTGTAGGACCTCATGGGGCAGGGCAG
                      ____________________________________________________________
consensus             AAACAGCAAGGTGGACAAAGGGCTTCAGGTCAGATTGTAGGACCTCATGGGGCAGGGCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024F20+          GCATCACCACATGCTTCAACTGCAAGACAGGAAGATGAAGTCCCACAAATGGCCGGAAGA
                      ____________________________________________________________
consensus             GCATCACCACATGCTTCAACTGCAAGACAGGAAGATGAAGTCCCACAAATGGCCGGAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF024F20+          GTAGTGCAGTTTAATTCTTTTGGTAGATAAATCATTGTTGTCCATGCTTCTTTTTTCAGA
                      ____________________________________________________________
consensus             GTAGTGCAGTTTAATTCTTTTGGTAGATAAATCATTGTTGTCCATGCTTCTTTTTTCAGA