Contig 011067:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024A06Sequence501006347 (4)ref|XP_006349043.1|3e-25PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Solanum tuberosum]750011067 (4)gb|AGT97047.1|8e-123pheophorbide A oxygenase [Capsicum annuum]
JMFS022B06Sequence605011067 (4)gb|ABY19385.1|7e-132pheophorbide A oxygenase 2 [Nicotiana tabacum]
JMSF002D20Sequence337006347 (4)727011067 (4)gb|AFU51539.1|4e-122lethal leaf spot 1-like protein [Capsicum annuum]
JMSF037N16Sequence579006347 (4)ref|XP_006349043.1|9e-39PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Solanum tuberosum]683011067 (4)gb|AFU51539.1|8e-112lethal leaf spot 1-like protein [Capsicum annuum]

Alignment

This contig is upended


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JMFS022B06-                               ACCCTTCTACATTGATTTTGCACATCACAAGGTTACTGGT
                      ____________________________________________________________
consensus                                 ACCCTTCTACATTGATTTTGCACATCACAAGGTTACTGGT
 
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JMFS022B06-           AGGAGAGATAGAGCCAAGCCGTTGCCATTCAAAATGGAGTCTTCAGGACCTTGGGGTTAT
                      ____________________________________________________________
consensus             AGGAGAGATAGAGCCAAGCCGTTGCCATTCAAAATGGAGTCTTCAGGACCTTGGGGTTAT
 
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JMFS022B06-           GCTGGTGCAAATAGTGATAACCCTAAAATTAGTGCCAAGTTTATTGCTCCTTGCTATGCG
                      ____________________________________________________________
consensus             GCTGGTGCAAATAGTGATAACCCTAAAATTAGTGCCAAGTTTATTGCTCCTTGCTATGCG
 
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JMFS022B06-           ATGAATAAAATAGAGATTGACACAAAGCTTCCAGTTCTTGGAGATCAAAAATGGGTAATT
                      ____________________________________________________________
consensus             ATGAATAAAATAGAGATTGACACAAAGCTTCCAGTTCTTGGAGATCAAAAATGGGTAATT
 
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JMFS022B06-           TGGATTTGCTCCTTCAATGTACCCATGGCACCGGGGAAGACCCGCTCAATTGTCTGTAGT
rJMSF002D20+                                           GGGAAGACCCGCTCAATTGTCTGTAGT
rJMFF024A06+                                           GGGAAGACCCGCTCAATTGTCTGTAGT
                      ____________________________________________________________
consensus             TGGATTTGCTCCTTCAATGTACCCATGGCACCGGGGAAGACCCGCTCAATTGTCTGTAGT
 
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JMFS022B06-           GCTCGGAACTTCTTCCAGCTCACAATGCCAGGGCCTGCCTGGTGGCAGGTATTTCCGAGA
rJMSF002D20+          GCTCGGAACTTCTTCCAGCTCACAATGCCAGGGCCTGCCTGGTGGCAGGTATTTCCGAGA
rJMSF037N16+                      TTCCAGCTCACAATGCCAGGGCCTGCCTGGTGGCAGGTATTTCCGAGA
rJMFF024A06+          GCTCGGAACTTCTTCCAGCTCACAATGCCAGGGCCTGCCTGGTGGCAGGTATTTCCGAGA
                      ____________________________________________________________
consensus             GCTCGGAACTTCTTCCAGCTCACAATGCCAGGGCCTGCCTGGTGGCAGGTATTTCCGAGA
 
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JMFS022B06-           TGGCAAGAGCATTGGACTTCAAATAAGGTGTACGATGGAGATATGATTGTGCTTCAAGGT
rJMSF002D20+          TGGCAAGAGCATTGGACTTCAAATAAGGTGTACGATGGAGATATGATTGTGCTTCAAGGT
rJMSF037N16+          TGGCAAGAGCATTGGACTTCAAATAAGGTGTACGATGGAGATATGATTGTGCTTCAAGGT
rJMFF024A06+          TGGCAAGAGCATTGGACTTCAAATAAGGTGTACGATGGAGATATGATTGTGCTTCAAGGT
                      ____________________________________________________________
consensus             TGGCAAGAGCATTGGACTTCAAATAAGGTGTACGATGGAGATATGATTGTGCTTCAAGGT
 
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JMFS022B06-           CAAGAAAAGATCTTCCTTTCAAAGTCGAGGGAGTCCTCTGCAGATATTAATAAAGAGTAT
rJMSF002D20+          CAAGAAAAGATCTTCCTTTCAAAGTCGAGGGAGTCCTCTGCAGATATTAATAAAGAGTAT
rJMSF037N16+          CAAGAAAAGATCTTCCTTTCAAAGTCGAGGGAGTCCTCTGCAGATATTAATAAAGAGTAT
rJMFF024A06+          CAAGAAAAGATCTTCCTTTCAAAGTCGAGGGAGTCCTCTGCAGATATTAATAAAGAGTAT
                      ____________________________________________________________
consensus             CAAGAAAAGATCTTCCTTTCAAAGTCGAGGGAGTCCTCTGCAGATATTAATAAAGAGTAT
 
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JMFS022B06-           ACAAAACTCACGTTCACGCCTACACAAGCTGACCGCTTTGTCTTGGCGTTTCGGAATTGG
rJMSF002D20+          ACAAAACTCACGTTCACGCCTACACAAGCTGACCGCTTTGTCTTGGCGTTTCGGAATTGG
rJMSF037N16+          ACAAAACTCACGTTCACGCCTACACAAGCTGACCGCTTTGTCTTGGCGTTTCGGAATTGG
rJMFF024A06+          ACAAAACTCACGTTCACGCCTACACAAGCTGACCGCTTTGTCTTGGCGTTTCGGAATTGG
                      ____________________________________________________________
consensus             ACAAAACTCACGTTCACGCCTACACAAGCTGACCGCTTTGTCTTGGCGTTTCGGAATTGG
 
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JMFS022B06-           CTTAGGCGACATGGAAATGGTCAGCCAGAGTGGTTCGGTAGCGTTGAGCAACTACCGTTG
rJMSF002D20+          CTTAGGCGACATGGAAATGGTCAGCCAGAGTGGTTCGGTAGCGTTGAGCAACTACCGTTG
rJMSF037N16+          CTTAGGCGACATGGAAATGGTCAGCCAGAGTGGTTCGGTAGCGTTGAGCAACTACCGTTG
rJMFF024A06+          CTTAGGCGACATGGAAATGGTCAGCCAGAGTGGTTCGGTAGCGTTGAGCAACTACCGTTG
                      ____________________________________________________________
consensus             CTTAGGCGACATGGAAATGGTCAGCCAGAGTGGTTCGGTAGCGTTGAGCAACTACCGTTG
 
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JMFS022B06-           CCATCTACCGTCTTGTCCAAACGTC                                   
rJMSF002D20+          CCATCTACCGTCTTGTCCAAACGTCAGATGCTGGACAGATATGAGCAGCATACACTGAAA
rJMSF037N16+          CCATCTACCGTCTTGTCCAAACGTCAGATGCTGGACAGATATGAGCAGCATACACTGAAA
rJMFF024A06+          CCATCTACCGTCTTGTCCAAACGTCAGATGCTGGACAGATATGAGCAGCATACACTGAAA
                      ____________________________________________________________
consensus             CCATCTACCGTCTTGTCCAAACGTCAGATGCTGGACAGATATGAGCAGCATACACTGAAA
 
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rJMSF002D20+          TGCTCGTCTTGTAAAAGCGCATATAAAACATTTGAGACATTGCAAAAGTTTTTGATTGGT
rJMSF037N16+          TGCTCGTCTTGTAAAAGCGCATATAAAACATTTGAGACATTGCAAAAGTTTTTGATTGGT
rJMFF024A06+          TGCTCGTCTTGTAAAAGCGCATATAAAACATTTGAGACATTGCAAAAGTTTTTGATTGGT
                      ____________________________________________________________
consensus             TGCTCGTCTTGTAAAAGCGCATATAAAACATTTGAGACATTGCAAAAGTTTTTGATTGGT
 
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rJMSF002D20+          GTGGTCGTTTGCTGTTCTGCAACAGCCGGAATCCCTTCTGACATCAGATACCGAATTATT
rJMSF037N16+          GTGGTCGTTTGCTGTTCTGCAACAGCCGGAATCCCTTCTGACATCAGATACCGAATTATT
rJMFF024A06+          GTGGTCGTTTGCTGTTCTGCAACAGCCGGAATCCCTTCTGACATCAGATACCGAATTATT
                      ____________________________________________________________
consensus             GTGGTCGTTTGCTGTTCTGCAACAGCCGGAATCCCTTCTGACATCAGATACCGAATTATT
 
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rJMSF002D20+          TTGGGCGCCCTGGCGATTGTAAGTGCTGGCTTGGCATACACCTTATTTGAACTCCAGAAA
rJMSF037N16+          TTGGGCGCCCTGGCGATTGTAAGTGCTGGCTTGGCATACACCTTATTTGAACTCCAGAAA
rJMFF024A06+          TTGGGCGCCCTGGCGATTGTAAGTGCTGGCTTGGCATACACCTTATTTGAACTCCAGAAA
                      ____________________________________________________________
consensus             TTGGGCGCCCTGGCGATTGTAAGTGCTGGCTTGGCATACACCTTATTTGAACTCCAGAAA
 
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rJMSF002D20+          AATTTTGTTTTCGTTGATTATGTACATGCTGAAATCGAAGATTAAATAGTCAAAGAAATT
rJMSF037N16+          AATTTTGTTTTCGTTGATTATGTACATGCTGAAATCGAAGATTAAATAGTCAAAGAAATT
rJMFF024A06+          AATTTTGTTTTCGTTGATTATGTACATGCTGAAATCGAAGATTAAATAGTCAAAGAAATT
                      ____________________________________________________________
consensus             AATTTTGTTTTCGTTGATTATGTACATGCTGAAATCGAAGATTAAATAGTCAAAGAAATT
 
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rJMSF002D20+          CGACTGGAATAGGATTTAGAACTGTAGCAGCATATATAAGTTGAGTAGCTTCCACGTGTA
rJMSF037N16+          CGACTGGAATAGGATTTAGAACTGTAGCAGCATATATAAGTTGAGTAGCTTCCACGTGTA
rJMFF024A06+          CGACTGGAATAGGATTTAGAACTGTAGCAGCATATATAAGTTGAGTAGCTTCCACGTGTA
                      ____________________________________________________________
consensus             CGACTGGAATAGGATTTAGAACTGTAGCAGCATATATAAGTTGAGTAGCTTCCACGTGTA
 
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rJMSF002D20+          AAACACGCATATATAGTATGTATATGTTACAGATT                         
rJMSF037N16+          AAACACGCATATATAGTATGTATATGTTACAGATT                         
rJMFF024A06+          AAACACGCATATATAGTATGTATATGTTACAGATTTAGATTTTACACACGTATATATACA
                      ____________________________________________________________
consensus             AAACACGCATATATAGTATGTATATGTTACAGATTTAGATTTTACACACGTATATATACA