Contig 011065:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023N19Sequence409005962 (3)ref|XP_009759222.1|51.2PREDICTED: uncharacterized protein LOC104211794 [Nicotiana sylvestris]689011065 (3)ref|XP_011098555.1|287PREDICTED: uncharacterized protein LOC105177196 [Sesamum indicum]
JMSF012A12Sequence477005962 (3)ref|XP_009759222.1|83.6PREDICTED: uncharacterized protein LOC104211794 [Nicotiana sylvestris]758011065 (3)ref|XP_011098555.1|363PREDICTED: uncharacterized protein LOC105177196 [Sesamum indicum]
JMSF038L18Sequence199011065 (3)ref|XP_004232250.1|90.5PREDICTED: uncharacterized protein LOC101262766 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMSF012A12+                                                  CGGAAGATCCATCACATTGC
                      ____________________________________________________________
consensus                                                     CGGAAGATCCATCACATTGC
 
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rJMSF012A12+          ACGTTTTGTGGAACTTCCAGCCATTGATTCACCAGGAGAGATCCCTCCCATACTTATTGT
                      ____________________________________________________________
consensus             ACGTTTTGTGGAACTTCCAGCCATTGATTCACCAGGAGAGATCCCTCCCATACTTATTGT
 
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rJMSF012A12+          AAATCTTCAGATCCCTTTGTACTCTGCTGCAATCTTTCAAAATGAATATGATGGGGAAGG
rJMFF023N19+                                         ATCTTTCAAAATGAATATGATGGGGAAGG
                      ____________________________________________________________
consensus             AAATCTTCAGATCCCTTTGTACTCTGCTGCAATCTTTCAAAATGAATATGATGGGGAAGG
 
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rJMSF012A12+          AGTGAGTTTCGTTTTCTATTTCAAACTTTCAGAAAATTACTCAAAAGAACTTCCAGCCCA
rJMFF023N19+          AGTGAGTTTCGTTTTNTATTTCAAACTTTCAGAAAATTACTCAAAAGAACTTCCAGCCCA
                      ____________________________________________________________
consensus             AGTGAGTTTCGTTTTCTATTTCAAACTTTCAGAAAATTACTCAAAAGAACTTCCAGCCCA
 
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rJMSF038L18+                            GAAGNTGATCCATGACGAAAAAGAAAAGATTAAAGGATTTCC
rJMSF012A12+          TTTTCAAGAAAATATCAGGAAGCTGATCCATGACGAAAAAGAAAAGATTAAAGGATTTCC
rJMFF023N19+          TTTTCAAGAAAATATCAGGAAGCTGATCCATGACGAAAAAGAAAAGATTAAAGGATTTCC
                      ____________________________________________________________
consensus             TTTTCAAGAAAATATCAGGAAGCTGATCCATGACGAAAAAGAAAAGATTAAAGGATTTCC
 
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rJMSF038L18+          CATTGATACAAGCGCACCCTTCAGAGAAAGATTGAAAATCCTAGGTCGAGTGGTTAATAT
rJMSF012A12+          CATTGATACAAGCGCACCCTTCAGAGAAAGATTGAAAATCCTAGGTCGAGTGGTTAATAT
rJMFF023N19+          CATTGATACAAGCGCACCCTTCAGAGAAAGATTGAAAATCCTAGGTCGAGTGGTTAATAT
                      ____________________________________________________________
consensus             CATTGATACAAGCGCACCCTTCAGAGAAAGATTGAAAATCCTAGGTCGAGTGGTTAATAT
 
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rJMSF038L18+          AGAGGGCCTTCAATTAAGCGCAACAGAAAAGAAGCTCATGAATGCCTATAATGAA     
rJMSF012A12+          AGAGGGCCTTCAATTAAGCGCAACAGAAAAGAAGCTCATGAATGCCTATAATGAAAAACC
rJMFF023N19+          AGAGGGCCTTCAATTAAGCGCAACAGAAAAGAAGCTCATGAATGCCTATAATGAAAAACC
                      ____________________________________________________________
consensus             AGAGGGCCTTCAATTAAGCGCAACAGAAAAGAAGCTCATGAATGCCTATAATGAAAAACC
 
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rJMSF012A12+          TGTTCTCTCGCGTCCTCAACATGAATTTTACCTGGACAAAAACTACTTTGAGATTGATTT
rJMFF023N19+          TGTTNTCTCGCGTCCTCAACATGAATTTTACCTGGACAAAAACTACTTTGAGATTGATTT
                      ____________________________________________________________
consensus             TGTTCTCTCGCGTCCTCAACATGAATTTTACCTGGACAAAAACTACTTTGAGATTGATTT
 
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rJMSF012A12+          GGACATTCACAGATTCAGTTACCTTGCCAGGAAAGGCTTTGAAACATTCCATGACAGAGT
rJMFF023N19+          GGACATTCACAGATTCAGTTACCTTCCCAGGAAAGGCTTTGAAACATTCCATGACAGAGT
                      ____________________________________________________________
consensus             GGACATTCACAGATTCAGTTACCTTGCCAGGAAAGGCTTTGAAACATTCCATGACAGAGT
 
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rJMSF012A12+          GAAGAACTTTGTCTTGGATTTTGGTCTGACGATTCAGGGAAACAAGGCAGAGGATTTGCC
rJMFF023N19+          GAAGAACTTTGTCTTGGATTTTGGTNTGACGATTCAGGGAAACAAGGCAGAGGATTTGCC
                      ____________________________________________________________
consensus             GAAGAACTTTGTCTTGGATTTTGGTCTGACGATTCAGGGAAACAAGGCAGAGGATTTGCC
 
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rJMSF012A12+          CGAGCACCTGTTATGTTGCTTAAGATTGAAAGAAATCGACTATAGTAAATATTGCCAACT
rJMFF023N19+          CGAGCACCTGTTATGTTGCTTAAGATTGAAAGAAATCGACTATAGTAAATATTGCCAACT
                      ____________________________________________________________
consensus             CGAGCACCTGTTATGTTGCTTAAGATTGAAAGAAATCGACTATAGTAAATATTGCCAACT
 
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rJMSF012A12+          GGAGTTATGAATGAACAGCACAGGTATAAACCTAAAGGATGACAGACAATCTACATGGAA
rJMFF023N19+          GGAGTTATGAATGAACAGCACAGGTATAAACCTAAAGGATGACAGACAATNTACATGGAA
                      ____________________________________________________________
consensus             GGAGTTATGAATGAACAGCACAGGTATAAACCTAAAGGATGACAGACAATCTACATGGAA
 
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rJMSF012A12+          ACAACAGCGCACCTAATTATTCATTTGTTCTTTTCTTCTATTCTCTTTTCCAAACTTCCT
rJMFF023N19+          ACAACAGCGCACCTAATTATTCATTTGTTCTTTTCTTCTATTCTCTTTTCCAAACTTCCT
                      ____________________________________________________________
consensus             ACAACAGCGCACCTAATTATTCATTTGTTCTTTTCTTCTATTCTCTTTTCCAAACTTCCT
 
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rJMSF012A12+          TTTGTGTACAAGAAT                                             
rJMFF023N19+          TTTGTGTACAAGAATTAGCGCATATTTGGTAATGCAATTGTGCTGGAATTCACGAAACNG
                      ____________________________________________________________
consensus             TTTGTGTACAAGAATTAGCGCATATTTGGTAATGCAATTGTGCTGGAATTCACGAAACNG